Os03g0806900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome-C reductase 14 kDa subunit (EC 1.10.2.2) (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os03g0806900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Cytochrome-C reductase 14 kDa subunit (EC 1.10.2.2) (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.4 | 0.222 | 12.1 | -0.305 | 0.339 | -0.477 | 0.0895 | -0.211 | -0.0813 | 19.4 | 71.12 | 4021 | -- | -- |
| 22.46 | 0.221 | 12.1 | -0.313 | 0.337 | -0.487 | 0.107 | -- | -0.0889 | 19.4 | 71.31 | 4023 | -- | -- |
| 22.42 | 0.221 | 12.1 | -0.305 | 0.339 | -0.475 | -- | -0.227 | -0.0807 | 19.4 | 71.11 | 4023 | -- | -- |
| 22.49 | 0.221 | 12.1 | -0.322 | 0.343 | -0.493 | -- | -- | -0.0888 | 19.4 | 71.5 | 4051 | -- | -- |
| 27.46 | 0.244 | 12.1 | -0.316 | -- | -0.582 | -- | -0.184 | -0.0953 | -- | 73 | 3693 | -- | -- |
| 26.33 | 0.241 | 12.1 | -0.317 | 0.368 | -- | 0.0996 | -- | -0.00213 | 19.9 | -- | -- | -- | -- |
| 26.35 | 0.24 | 12.1 | -0.32 | 0.368 | -- | -- | -- | -0.00203 | 19.9 | -- | -- | -- | -- |
| 27.34 | 0.244 | 12.1 | -0.376 | -- | -0.535 | -- | -- | -0.0498 | -- | 74 | 2106 | -- | -- |
| 25.13 | 0.233 | 12.1 | -- | 0.36 | -0.493 | -- | -- | -0.0723 | 19.5 | 72 | 4105 | -- | -- |
| 33.72 | 0.271 | 12.1 | -0.324 | -- | -- | -- | -- | -0.00687 | -- | -- | -- | -- | -- |
| 29.05 | 0.252 | 12.1 | -- | 0.37 | -- | -- | -- | 0.0336 | 19.9 | -- | -- | -- | -- |
| 30.4 | 0.257 | 12.1 | -- | -- | -0.594 | -- | -- | -0.043 | -- | 70 | 5033 | -- | -- |
| 36.48 | 0.282 | 12.1 | -- | -- | -- | -- | -- | 0.029 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.14 | humidity | 70 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 4 | 22.34 | humidity | 70 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 5 | 22.36 | humidity | 70 | 4320 | > th | dose independent | rect. | 9 | 8 |
| 6 | 22.37 | humidity | 70 | 4320 | > th | dose dependent | rect. | 8 | 12 |
| 10 | 22.40 | humidity | 60 | 4320 | > th | dose dependent | rect. | 10 | 5 |
| 19 | 22.43 | humidity | 60 | 4320 | > th | dose dependent | rect. | 10 | 7 |
| 22 | 22.44 | humidity | 70 | 4320 | > th | dose independent | rect. | 19 | 22 |
| 47 | 22.48 | humidity | 70 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 68 | 22.51 | humidity | 60 | 4320 | > th | dose dependent | sin | 22 | NA |
| 97 | 22.54 | humidity | 70 | 4320 | < th | dose independent | rect. | 9 | 7 |
| 124 | 22.56 | humidity | 80 | 4320 | < th | dose independent | rect. | 7 | 16 |
| 171 | 22.60 | humidity | 80 | 4320 | > th | dose independent | rect. | 7 | 17 |
| 181 | 22.61 | humidity | 70 | 4320 | > th | dose independent | rect. | 9 | 11 |
| 195 | 22.62 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 9 |
| 234 | 22.64 | humidity | 80 | 4320 | < th | dose independent | rect. | 7 | 13 |
| 240 | 22.64 | humidity | 70 | 4320 | < th | dose independent | rect. | 19 | 21 |
| 247 | 22.65 | humidity | 80 | 4320 | < th | dose independent | sin | 20 | NA |
| 262 | 22.66 | humidity | 70 | 4320 | > th | dose independent | sin | 23 | NA |
| 271 | 22.66 | radiation | 10 | 4320 | < th | dose independent | rect. | 17 | 18 |
| 288 | 22.67 | humidity | 90 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 292 | 22.67 | humidity | 70 | 4320 | > th | dose dependent | rect. | 15 | 5 |
| 303 | 22.68 | humidity | 70 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 319 | 22.69 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 7 |
| 325 | 22.69 | humidity | 50 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 333 | 22.70 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 341 | 22.70 | humidity | 80 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 355 | 22.71 | humidity | 80 | 4320 | < th | dose independent | rect. | 13 | 10 |
| 471 | 22.74 | humidity | 70 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 505 | 22.75 | humidity | 80 | 4320 | < th | dose independent | rect. | 14 | 6 |
| 508 | 22.75 | humidity | 80 | 4320 | > th | dose independent | rect. | 14 | 9 |
| 525 | 22.75 | humidity | 90 | 4320 | < th | dose dependent | rect. | 10 | 15 |
| 581 | 22.76 | humidity | 90 | 4320 | < th | dose dependent | rect. | 10 | 13 |
| 590 | 22.77 | humidity | 70 | 4320 | > th | dose independent | no | NA | NA |
| 637 | 22.77 | humidity | 70 | 4320 | > th | dose independent | rect. | 13 | 23 |
| 668 | 22.78 | humidity | 80 | 4320 | > th | dose independent | rect. | 14 | 6 |
| 680 | 22.78 | humidity | 90 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 681 | 22.78 | wind | 3 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 691 | 22.78 | humidity | 90 | 4320 | < th | dose dependent | rect. | 10 | 11 |
| 703 | 22.78 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 708 | 22.79 | radiation | 10 | 4320 | > th | dose independent | rect. | 5 | 4 |
| 754 | 22.79 | humidity | 90 | 4320 | < th | dose dependent | sin | 18 | NA |
| 863 | 22.81 | humidity | 60 | 4320 | > th | dose dependent | rect. | 22 | 22 |
| 869 | 22.82 | radiation | 10 | 4320 | < th | dose independent | rect. | 5 | 6 |
| 949 | 22.83 | humidity | 90 | 4320 | < th | dose dependent | rect. | 13 | 12 |
| 986 | 22.84 | radiation | 10 | 4320 | < th | dose independent | rect. | 14 | 20 |
| 993 | 22.84 | humidity | 60 | 4320 | > th | dose dependent | no | NA | NA |
| 998 | 22.84 | humidity | 90 | 4320 | < th | dose dependent | rect. | 13 | 7 |