Os03g0805900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Rieske [2Fe-2S] region domain containing protein.
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Os03g0805900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Rieske [2Fe-2S] region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139.83 | 0.556 | 3.07 | -0.0956 | 0.0893 | 0.423 | 0.241 | -0.875 | -0.165 | 6.47 | 1004 | 51 | -- | -- |
| 141 | 0.553 | 3.07 | -0.115 | 0.0876 | 0.435 | 0.178 | -- | -0.162 | 6.51 | 1004 | 69 | -- | -- |
| 139.97 | 0.551 | 3.07 | -0.0951 | 0.0894 | 0.421 | -- | -0.853 | -0.168 | 6.68 | 1004 | 49 | -- | -- |
| 141.07 | 0.553 | 3.07 | -0.111 | 0.0892 | 0.436 | -- | -- | -0.16 | 6.94 | 1004 | 67 | -- | -- |
| 140.38 | 0.552 | 3.07 | -0.0886 | -- | 0.443 | -- | -0.84 | -0.166 | -- | 1004 | 69 | -- | -- |
| 143.92 | 0.562 | 3.05 | -0.127 | 0.118 | -- | 0.176 | -- | -0.0821 | 6.73 | -- | -- | -- | -- |
| 143.99 | 0.562 | 3.05 | -0.124 | 0.118 | -- | -- | -- | -0.0823 | 7.12 | -- | -- | -- | -- |
| 141.47 | 0.554 | 3.07 | -0.11 | -- | 0.454 | -- | -- | -0.162 | -- | 1004 | 69 | -- | -- |
| 141.4 | 0.554 | 3.07 | -- | 0.0869 | 0.438 | -- | -- | -0.148 | 6.97 | 1004 | 79 | -- | -- |
| 144.73 | 0.562 | 3.05 | -0.122 | -- | -- | -- | -- | -0.0802 | -- | -- | -- | -- | -- |
| 144.4 | 0.562 | 3.05 | -- | 0.117 | -- | -- | -- | -0.0685 | 7.19 | -- | -- | -- | -- |
| 141.79 | 0.555 | 3.07 | -- | -- | 0.458 | -- | -- | -0.151 | -- | 1004 | 93 | -- | -- |
| 145.12 | 0.562 | 3.05 | -- | -- | -- | -- | -- | -0.0667 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.74 | wind | 1.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 4 | 132.96 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 2 |
| 9 | 133.39 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 12 | 133.82 | humidity | 60.0 | 30 | < th | dose dependent | rect. | 17 | 17 |
| 14 | 134.11 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 20 | 134.67 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 3 | 1 |
| 28 | 134.67 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 43 | 134.77 | wind | 1.0 | 10 | < th | dose independent | rect. | 6 | 4 |
| 49 | 134.81 | wind | 1.0 | 10 | < th | dose dependent | rect. | 6 | 4 |
| 55 | 134.95 | temperature | 25.0 | 10 | > th | dose independent | rect. | 3 | 1 |
| 57 | 134.95 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 3 | 1 |
| 59 | 134.97 | wind | 1.0 | 10 | < th | dose dependent | rect. | 6 | 7 |
| 72 | 135.25 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 87 | 135.34 | humidity | 60.0 | 90 | < th | dose independent | rect. | 8 | 2 |
| 129 | 135.89 | humidity | 60.0 | 30 | < th | dose independent | rect. | 17 | 18 |
| 154 | 136.45 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 168 | 136.83 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 181 | 136.84 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 197 | 136.91 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 23 | 10 |
| 313 | 136.95 | humidity | 50.0 | 30 | < th | dose independent | rect. | 17 | 22 |
| 321 | 136.98 | humidity | 60.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 414 | 137.10 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 3 |
| 450 | 137.19 | humidity | 50.0 | 30 | < th | dose dependent | rect. | 17 | 1 |
| 485 | 137.24 | humidity | 50.0 | 30 | < th | dose independent | rect. | 17 | 1 |
| 534 | 137.28 | wind | 1.0 | 10 | < th | dose independent | sin | 22 | NA |
| 535 | 137.28 | radiation | 10.0 | 30 | > th | dose independent | rect. | 17 | 1 |
| 548 | 137.28 | wind | 1.0 | 10 | < th | dose dependent | sin | 22 | NA |
| 687 | 137.61 | radiation | 10.0 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 718 | 137.83 | temperature | 30.0 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 722 | 137.85 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 746 | 137.90 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 751 | 137.93 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 752 | 137.93 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 761 | 137.99 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 769 | 138.01 | wind | 1.0 | 10 | > th | dose independent | sin | 22 | NA |
| 796 | 138.11 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 921 | 138.41 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 922 | 138.41 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 923 | 138.41 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 937 | 138.45 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 938 | 138.45 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 942 | 138.49 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 19 | 10 |
| 964 | 138.52 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 972 | 138.56 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 982 | 138.63 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 987 | 138.65 | humidity | 60.0 | 10 | < th | dose dependent | sin | 10 | NA |
| 989 | 138.67 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 990 | 138.67 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 1 |