Os03g0804200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant lipid transfer protein/Par allergen family protein.
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Os03g0804200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant lipid transfer protein/Par allergen family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 144.11 | 0.564 | 11.7 | -0.985 | 1.54 | 2.31 | -1.02 | -3.61 | 0.49 | 8.57 | 25.41 | 5689 | -- | -- |
| 145.47 | 0.562 | 11.7 | -0.176 | 1.65 | 2.07 | -0.865 | -- | 0.209 | 8.34 | 22.47 | 7867 | -- | -- |
| 146.68 | 0.564 | 11.7 | -1.31 | 1.55 | 2.41 | -- | -4.89 | 0.488 | 8.56 | 26.15 | 5662 | -- | -- |
| 147.16 | 0.565 | 11.7 | -0.178 | 1.56 | 1.95 | -- | -- | 0.303 | 8.58 | 22.78 | 7117 | -- | -- |
| 275.13 | 0.773 | 11.8 | -1.26 | -- | 2.38 | -- | -5.05 | 0.575 | -- | 26.97 | 5743 | -- | -- |
| 295.01 | 0.805 | 11.5 | 0.765 | 1.55 | -- | -1.14 | -- | 0.931 | 8.29 | -- | -- | -- | -- |
| 299.01 | 0.81 | 11.5 | 0.73 | 1.56 | -- | -- | -- | 0.931 | 8.23 | -- | -- | -- | -- |
| 280.65 | 0.78 | 11.7 | -0.158 | -- | 1.94 | -- | -- | 0.327 | -- | 23.01 | 7205 | -- | -- |
| 147.58 | 0.566 | 11.7 | -- | 1.54 | 1.83 | -- | -- | 0.429 | 8.6 | 24.5 | 7112 | -- | -- |
| 433.07 | 0.972 | 11.6 | 0.741 | -- | -- | -- | -- | 0.948 | -- | -- | -- | -- | -- |
| 313.04 | 0.828 | 11.6 | -- | 1.56 | -- | -- | -- | 0.849 | 8.2 | -- | -- | -- | -- |
| 278.55 | 0.777 | 11.7 | -- | -- | 1.79 | -- | -- | 0.461 | -- | 26 | 7164 | -- | -- |
| 447.55 | 0.987 | 11.6 | -- | -- | -- | -- | -- | 0.866 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 11 |
| 8 | 149.13 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 29 | 149.82 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 58 | 150.64 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 65 | 150.78 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 78 | 151.21 | temperature | 25 | 1440 | > th | dose dependent | rect. | 2 | 20 |
| 79 | 151.23 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 5 |
| 157 | 151.86 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 190 | 152.12 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 199 | 152.18 | temperature | 20 | 4320 | > th | dose dependent | rect. | 4 | 5 |
| 208 | 152.30 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 235 | 152.70 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 365 | 154.92 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 374 | 155.10 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 433 | 156.30 | temperature | 25 | 4320 | > th | dose dependent | sin | 5 | NA |
| 440 | 156.43 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 489 | 157.18 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 495 | 157.23 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 504 | 157.39 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 541 | 157.66 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 593 | 157.90 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 15 |
| 651 | 158.26 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 15 |
| 655 | 158.27 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 17 |
| 660 | 158.30 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 684 | 158.40 | temperature | 25 | 14400 | > th | dose dependent | sin | 15 | NA |
| 847 | 159.05 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 853 | 159.09 | temperature | 10 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 892 | 159.37 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 893 | 159.37 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 917 | 159.51 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 920 | 159.55 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 933 | 159.62 | temperature | 30 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 934 | 159.62 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 967 | 159.77 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 983 | 159.82 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 3 |