Os03g0798000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain containing protein.
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Os03g0798000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 161.38 | 0.597 | 3.13 | 0.429 | 0.306 | 0.85 | 1.05 | -1.32 | 0.0895 | 8.75 | 18.3 | 799 | -- | -- |
| 163.4 | 0.595 | 3.15 | 0.335 | 0.293 | 1.12 | 0.943 | -- | 0.0751 | 8.64 | 18.4 | 807 | -- | -- |
| 164.67 | 0.598 | 3.14 | 0.433 | 0.303 | 0.905 | -- | -0.835 | 0.0815 | 8.67 | 18.3 | 807 | -- | -- |
| 165.59 | 0.599 | 3.15 | 0.374 | 0.301 | 1.11 | -- | -- | 0.0695 | 8.47 | 18.35 | 807 | -- | -- |
| 169.77 | 0.607 | 3.15 | 0.454 | -- | 1.03 | -- | -0.746 | 0.0943 | -- | 18.39 | 807 | -- | -- |
| 179.32 | 0.628 | 3.18 | 0.0301 | 0.39 | -- | 0.571 | -- | -0.0563 | 9.16 | -- | -- | -- | -- |
| 180.45 | 0.629 | 3.18 | 0.051 | 0.387 | -- | -- | -- | -0.0553 | 9.33 | -- | -- | -- | -- |
| 170.48 | 0.608 | 3.16 | 0.404 | -- | 1.22 | -- | -- | 0.0834 | -- | 18.31 | 783 | -- | -- |
| 168.87 | 0.605 | 3.17 | -- | 0.326 | 1.08 | -- | -- | 0.00496 | 8.16 | 18 | 752 | -- | -- |
| 189.18 | 0.643 | 3.19 | 0.0491 | -- | -- | -- | -- | -0.0537 | -- | -- | -- | -- | -- |
| 180.52 | 0.628 | 3.18 | -- | 0.387 | -- | -- | -- | -0.061 | 9.32 | -- | -- | -- | -- |
| 174.06 | 0.614 | 3.18 | -- | -- | 1.23 | -- | -- | 0.00703 | -- | 17.8 | 615 | -- | -- |
| 189.24 | 0.642 | 3.19 | -- | -- | -- | -- | -- | -0.0592 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 154.53 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 5 |
| 14 | 156.67 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 11 |
| 25 | 157.03 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 9 |
| 29 | 157.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 32 | 157.15 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 4 |
| 44 | 157.55 | temperature | 25 | 720 | < th | dose dependent | sin | 8 | NA |
| 66 | 157.84 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 179 | 159.02 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 187 | 159.13 | temperature | 20 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 347 | 160.31 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 13 |
| 355 | 160.34 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 398 | 160.57 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 14 |
| 437 | 160.76 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 10 |
| 458 | 160.86 | temperature | 20 | 720 | < th | dose independent | sin | 6 | NA |
| 503 | 161.02 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 561 | 161.25 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 676 | 161.74 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 19 |
| 729 | 161.99 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 1 |
| 784 | 162.24 | temperature | 20 | 720 | < th | dose dependent | no | NA | NA |
| 802 | 162.31 | temperature | 20 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 852 | 162.54 | temperature | 20 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 854 | 162.54 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 4 |
| 910 | 162.75 | wind | 9 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 918 | 162.80 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 5 |
| 989 | 163.09 | temperature | 25 | 90 | < th | dose independent | rect. | 10 | 1 |
| 993 | 163.09 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 13 |
| 998 | 163.11 | wind | 1 | 10 | > th | dose dependent | rect. | 11 | 1 |