Os03g0796900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BZIP protein.
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Os03g0796900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BZIP protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.12 | 0.27 | 11.2 | 0.545 | 0.258 | 0.73 | 0.111 | -0.357 | 0.106 | 18.5 | 12.57 | 27 | -- | -- |
| 33.78 | 0.271 | 11.2 | 0.547 | 0.255 | 0.687 | -0.159 | -- | 0.104 | 19.3 | 12.03 | 26 | -- | -- |
| 33.15 | 0.268 | 11.2 | 0.543 | 0.259 | 0.726 | -- | -0.341 | 0.105 | 18.5 | 12.58 | 26 | -- | -- |
| 33.79 | 0.271 | 11.2 | 0.547 | 0.263 | 0.711 | -- | -- | 0.104 | 18.7 | 12.03 | 26 | -- | -- |
| 36.34 | 0.281 | 11.2 | 0.53 | -- | 0.75 | -- | -0.356 | 0.0985 | -- | 11.37 | 23 | -- | -- |
| 41.32 | 0.301 | 11.2 | 0.533 | 0.878 | -- | -0.349 | -- | 0.0511 | 22.9 | -- | -- | -- | -- |
| 41.83 | 0.303 | 11.2 | 0.547 | 0.879 | -- | -- | -- | 0.0523 | 22.9 | -- | -- | -- | -- |
| 36.91 | 0.283 | 11.2 | 0.532 | -- | 0.743 | -- | -- | 0.0952 | -- | 10.67 | 20 | -- | -- |
| 41.52 | 0.3 | 11.2 | -- | 0.248 | 0.715 | -- | -- | 0.0453 | 18.6 | 10.45 | 28 | -- | -- |
| 89.8 | 0.443 | 11.2 | 0.565 | -- | -- | -- | -- | 0.0582 | -- | -- | -- | -- | -- |
| 49.71 | 0.33 | 11.2 | -- | 0.884 | -- | -- | -- | -0.0086 | 22.9 | -- | -- | -- | -- |
| 44.28 | 0.31 | 11.2 | -- | -- | 0.746 | -- | -- | 0.0338 | -- | 10 | 20 | -- | -- |
| 98.23 | 0.463 | 11.2 | -- | -- | -- | -- | -- | -0.00454 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.19 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 4 |
| 4 | 28.38 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 11 | 8 |
| 7 | 28.48 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 7 | 12 |
| 13 | 29.20 | radiation | 1.0 | 720 | < th | dose independent | rect. | 15 | 4 |
| 16 | 29.43 | radiation | 1.0 | 720 | < th | dose independent | rect. | 11 | 8 |
| 21 | 29.84 | radiation | 1.0 | 720 | < th | dose independent | rect. | 7 | 12 |
| 23 | 30.12 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 33 | 30.46 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 11 | 16 |
| 37 | 30.52 | radiation | 1.0 | 720 | < th | dose independent | rect. | 13 | 14 |
| 42 | 30.62 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 19 |
| 43 | 30.67 | radiation | 1.0 | 720 | < th | dose independent | rect. | 11 | 16 |
| 63 | 31.18 | radiation | 1.0 | 720 | > th | dose independent | rect. | 11 | 8 |
| 74 | 31.19 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 23 | 20 |
| 141 | 32.01 | radiation | 1.0 | 720 | < th | dose independent | rect. | 23 | 20 |
| 149 | 32.16 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 10 | 10 |
| 154 | 32.30 | humidity | 80.0 | 720 | > th | dose independent | rect. | 10 | 10 |
| 189 | 32.52 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 190 | 32.53 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 197 | 32.56 | radiation | 1.0 | 30 | > th | dose independent | sin | 0 | NA |
| 199 | 32.57 | humidity | 80.0 | 720 | < th | dose independent | rect. | 11 | 5 |
| 204 | 32.59 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 216 | 32.65 | radiation | 1.0 | 720 | < th | dose dependent | sin | 15 | NA |
| 219 | 32.67 | radiation | 1.0 | 30 | < th | dose independent | sin | 0 | NA |
| 238 | 32.75 | humidity | 80.0 | 720 | < th | dose independent | rect. | 11 | 9 |
| 244 | 32.77 | radiation | 1.0 | 720 | < th | dose independent | sin | 19 | NA |
| 335 | 33.11 | radiation | 1.0 | 720 | > th | dose independent | sin | 19 | NA |
| 368 | 33.24 | radiation | 1.0 | 30 | < th | dose dependent | sin | 0 | NA |
| 396 | 33.33 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 8 | 20 |
| 414 | 33.39 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 12 | 4 |
| 421 | 33.40 | humidity | 70.0 | 720 | > th | dose dependent | sin | 21 | NA |
| 472 | 33.53 | humidity | 80.0 | 720 | > th | dose independent | rect. | 24 | 20 |
| 490 | 33.58 | humidity | 80.0 | 720 | > th | dose independent | sin | 22 | NA |
| 512 | 33.61 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 515 | 33.62 | radiation | 10.0 | 30 | < th | dose dependent | no | NA | NA |
| 520 | 33.62 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 521 | 33.62 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 526 | 33.63 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 678 | 33.78 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 695 | 33.81 | humidity | 80.0 | 720 | < th | dose independent | sin | 21 | NA |
| 744 | 33.83 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 24 | 20 |
| 818 | 33.94 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 11 | 4 |
| 831 | 33.96 | humidity | 70.0 | 720 | > th | dose independent | rect. | 13 | 15 |
| 837 | 33.96 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 14 |
| 882 | 34.02 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 13 | 7 |
| 886 | 34.02 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 897 | 34.03 | humidity | 70.0 | 720 | > th | dose independent | rect. | 7 | 21 |
| 913 | 34.05 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 9 |
| 982 | 34.11 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 7 | 23 |