Os03g0796400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ENT domain containing protein.
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Os03g0796400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ENT domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.94 | 0.379 | 9.4 | -1.24 | 1.23 | 0.622 | 1.21 | -2.93 | -0.428 | 5.19 | 84.91 | 1337 | -- | -- |
| 75.13 | 0.404 | 9.36 | -0.942 | 1.37 | 0.545 | 1.21 | -- | -0.402 | 5.69 | 110.4 | 863 | -- | -- |
| 68.21 | 0.385 | 9.4 | -1.23 | 1.28 | 0.605 | -- | -2.76 | -0.418 | 5.03 | 83.52 | 1429 | -- | -- |
| 78.61 | 0.413 | 9.36 | -0.938 | 1.35 | 0.546 | -- | -- | -0.403 | 5.67 | 138.6 | 906 | -- | -- |
| 146.7 | 0.564 | 9.42 | -1.15 | -- | 0.681 | -- | -2.64 | -0.359 | -- | 89.59 | 1263 | -- | -- |
| 79.86 | 0.419 | 9.36 | -0.91 | 1.27 | -- | 1.08 | -- | -0.387 | 5.14 | -- | -- | -- | -- |
| 82.78 | 0.426 | 9.37 | -0.91 | 1.27 | -- | -- | -- | -0.392 | 5.13 | -- | -- | -- | -- |
| 149.92 | 0.573 | 9.38 | -0.876 | -- | -0.817 | -- | -- | -0.355 | -- | 166 | 1262 | -- | -- |
| 101.79 | 0.47 | 9.35 | -- | 1.36 | 0.453 | -- | -- | -0.315 | 5.61 | 161.4 | 887 | -- | -- |
| 167.56 | 0.605 | 9.38 | -0.865 | -- | -- | -- | -- | -0.36 | -- | -- | -- | -- | -- |
| 104.62 | 0.478 | 9.34 | -- | 1.26 | -- | -- | -- | -0.29 | 5.16 | -- | -- | -- | -- |
| 146.54 | 0.564 | 9.36 | -- | -- | -1.24 | -- | -- | -0.249 | -- | 333.8 | 344 | -- | -- |
| 187.31 | 0.639 | 9.36 | -- | -- | -- | -- | -- | -0.264 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.09 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 6 |
| 4 | 57.91 | humidity | 80 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 12 | 58.61 | humidity | 90 | 1440 | < th | dose dependent | rect. | 8 | 6 |
| 17 | 58.66 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 9 |
| 28 | 58.91 | humidity | 50 | 1440 | > th | dose dependent | rect. | 5 | 10 |
| 36 | 58.97 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 96 | 59.88 | humidity | 90 | 1440 | < th | dose dependent | sin | 3 | NA |
| 134 | 60.21 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 145 | 60.34 | humidity | 50 | 1440 | > th | dose dependent | sin | 2 | NA |
| 266 | 61.32 | humidity | 80 | 1440 | < th | dose independent | sin | 4 | NA |
| 329 | 61.95 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 351 | 62.15 | humidity | 70 | 720 | > th | dose dependent | sin | 23 | NA |
| 391 | 62.34 | humidity | 90 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 473 | 62.77 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 12 |
| 488 | 62.80 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 20 |
| 506 | 62.91 | humidity | 80 | 720 | > th | dose independent | sin | 23 | NA |
| 536 | 63.01 | radiation | 10 | 1440 | < th | dose dependent | sin | 21 | NA |
| 539 | 63.03 | radiation | 1 | 720 | < th | dose independent | rect. | 10 | 4 |
| 541 | 63.03 | radiation | 1 | 720 | < th | dose dependent | rect. | 10 | 4 |
| 543 | 63.03 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 5 |
| 578 | 63.21 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 19 |
| 583 | 63.24 | humidity | 90 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 612 | 63.35 | humidity | 60 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 708 | 63.60 | humidity | 80 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 790 | 63.78 | radiation | 1 | 1440 | > th | dose independent | rect. | 10 | 4 |
| 792 | 63.78 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 9 |
| 810 | 63.83 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 853 | 63.94 | radiation | 30 | 720 | < th | dose dependent | rect. | 12 | 20 |
| 904 | 64.06 | temperature | 15 | 270 | > th | dose independent | rect. | 7 | 17 |
| 906 | 64.07 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 928 | 64.15 | temperature | 15 | 270 | > th | dose independent | rect. | 19 | 16 |
| 977 | 64.31 | temperature | 15 | 270 | > th | dose independent | rect. | 8 | 15 |