Os03g0795500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1000 family protein.
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Os03g0795500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1000 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.56 | 0.202 | 11 | -0.316 | 0.294 | -1.28 | -0.597 | 0.377 | -0.117 | 4.45 | 25.16 | 278 | -- | -- |
| 18.71 | 0.201 | 11 | -0.256 | 0.288 | -1.31 | -0.488 | -- | -0.1 | 4.61 | 25.1 | 293 | -- | -- |
| 19.22 | 0.204 | 11 | -0.261 | 0.289 | -1.3 | -- | 0.108 | -0.103 | 5.38 | 25.25 | 335 | -- | -- |
| 19.24 | 0.204 | 11 | -0.253 | 0.291 | -1.3 | -- | -- | -0.101 | 5.37 | 25.23 | 334 | -- | -- |
| 22.47 | 0.221 | 11 | -0.223 | -- | -1.26 | -- | 0.0909 | -0.0488 | -- | 24.1 | 362 | -- | -- |
| 43.82 | 0.31 | 11 | 0.0807 | 0.0937 | -- | -0.481 | -- | 0.164 | 3.96 | -- | -- | -- | -- |
| 44.3 | 0.312 | 11 | 0.0873 | 0.111 | -- | -- | -- | 0.166 | 5.98 | -- | -- | -- | -- |
| 20.33 | 0.21 | 11 | -0.342 | -- | -1.51 | -- | -- | -0.0798 | -- | 23.05 | 1546 | -- | -- |
| 20.72 | 0.212 | 11 | -- | 0.278 | -1.21 | -- | -- | -0.0636 | 5.51 | 25.26 | 340 | -- | -- |
| 44.94 | 0.313 | 11 | 0.0905 | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
| 44.5 | 0.312 | 11 | -- | 0.112 | -- | -- | -- | 0.157 | 5.94 | -- | -- | -- | -- |
| 22.86 | 0.223 | 11 | -- | -- | -1.3 | -- | -- | -0.02 | -- | 23.22 | 1501 | -- | -- |
| 45.15 | 0.314 | 11 | -- | -- | -- | -- | -- | 0.159 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.19 | temperature | 25 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 6 | 18.58 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 7 | 18.61 | temperature | 25 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 8 | 18.61 | temperature | 25 | 270 | < th | dose dependent | rect. | 16 | 23 |
| 13 | 18.64 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 32 | 19.07 | temperature | 25 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 41 | 19.32 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 19 |
| 97 | 20.05 | temperature | 25 | 1440 | < th | dose dependent | sin | 2 | NA |
| 108 | 20.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 20 |
| 111 | 20.15 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 17 |
| 163 | 20.23 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 11 |
| 221 | 20.30 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 236 | 20.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 245 | 20.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 316 | 20.51 | temperature | 25 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 429 | 20.89 | temperature | 25 | 1440 | < th | dose dependent | sin | 17 | NA |
| 681 | 21.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 11 |
| 691 | 21.70 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 11 |
| 755 | 21.85 | temperature | 20 | 1440 | < th | dose independent | sin | 3 | NA |
| 757 | 21.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 769 | 21.88 | temperature | 20 | 1440 | > th | dose independent | sin | 3 | NA |
| 770 | 21.88 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 15 |
| 774 | 21.89 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 15 |
| 970 | 22.25 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 22 |
| 999 | 22.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 16 |