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Os03g0794800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to XRN3.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0104) R2 : 0.104
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.16 (0.0219) R2dN8 : 0.134 R2N8 : 0.104
σ : 0.196
deviance : 17.68
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
11.16 0.157 11.2 0.276 0.177 0.358 -0.101 -0.0364 0.24 24 92 401 -- --
11.16 0.156 11.2 0.275 0.174 0.357 -0.0939 -- 0.239 23.9 92 388 -- --
11.2 0.156 11.2 0.281 0.176 0.361 -- -0.0242 0.241 23.8 92.01 399 -- --
11.2 0.156 11.2 0.279 0.178 0.362 -- -- 0.24 23.8 92 399 -- --
12.59 0.165 11.2 0.306 -- 0.303 -- -0.128 0.243 -- 90.33 179 -- --
12.75 0.167 11.2 0.301 0.197 -- -0.105 -- 0.189 2.04 -- -- -- --
12.79 0.167 11.2 0.304 0.196 -- -- -- 0.19 2.04 -- -- -- --
12.59 0.165 11.2 0.299 -- 0.297 -- -- 0.253 -- 90.1 175 -- --
13.2 0.169 11.2 -- 0.182 0.38 -- -- 0.219 23.5 91.4 401 -- --
15.11 0.182 11.2 0.312 -- -- -- -- 0.194 -- -- -- -- --
15.23 0.183 11.2 -- 0.202 -- -- -- 0.156 2.08 -- -- -- --
14.46 0.178 11.2 -- -- 0.277 -- -- 0.214 -- 89 170 -- --
17.68 0.196 11.2 -- -- -- -- -- 0.16 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 10.72 precipitation 0.1 43200 > th dose dependent rect. 19 1
2 10.81 radiation 1.0 4320 < th dose dependent rect. 16 1
3 10.84 humidity 80.0 14400 > th dose independent rect. 15 1
5 10.92 precipitation 0.1 43200 > th dose independent rect. 19 1
6 10.95 precipitation 0.1 43200 < th dose independent rect. 19 1
7 10.95 precipitation 0.1 43200 < th dose dependent rect. 19 1
8 10.97 radiation 1.0 4320 > th dose independent rect. 16 1
9 10.97 radiation 1.0 4320 < th dose independent rect. 16 1
11 10.98 precipitation 0.1 4320 < th dose independent rect. 13 1
12 10.98 wind 9.0 14400 > th dose dependent rect. 10 1
13 10.98 precipitation 0.1 4320 > th dose dependent rect. 13 1
14 10.98 precipitation 0.1 4320 < th dose dependent rect. 13 1
16 11.00 humidity 80.0 14400 < th dose independent rect. 14 1
17 11.00 precipitation 0.1 4320 > th dose independent rect. 13 1
20 11.01 humidity 90.0 720 > th dose dependent rect. 4 20
39 11.10 precipitation 0.1 4320 > th dose dependent rect. 11 3
42 11.11 humidity 70.0 14400 > th dose dependent rect. 14 1
49 11.13 humidity 70.0 1440 > th dose independent rect. 14 2
51 11.13 humidity 90.0 720 > th dose dependent sin 22 NA
57 11.15 wind 1.0 43200 < th dose independent rect. 5 1
71 11.19 humidity 80.0 43200 > th dose independent rect. 6 1
72 11.19 humidity 80.0 43200 < th dose independent rect. 5 3
81 11.20 atmosphere 1005.0 14400 > th dose independent rect. 16 1
85 11.20 precipitation 0.1 4320 > th dose dependent rect. 8 6
86 11.20 radiation 1.0 720 < th dose dependent rect. 5 14
92 11.22 humidity 70.0 1440 < th dose independent rect. 14 1
100 11.22 radiation 1.0 1440 < th dose dependent rect. 7 12
108 11.22 radiation 1.0 1440 < th dose dependent rect. 7 22
109 11.23 atmosphere 1005.0 14400 < th dose independent rect. 16 1
110 11.23 wind 3.0 43200 < th dose dependent rect. 24 4
117 11.23 humidity 70.0 10 > th dose dependent rect. 15 17
128 11.24 wind 1.0 43200 < th dose independent rect. 1 2
151 11.25 radiation 1.0 720 < th dose dependent rect. 20 23
153 11.26 humidity 80.0 1440 < th dose independent rect. 10 8
161 11.26 humidity 90.0 720 > th dose dependent rect. 13 21
166 11.27 precipitation 0.1 4320 < th dose independent rect. 11 3
172 11.27 radiation 1.0 720 > th dose independent rect. 16 15
173 11.27 radiation 1.0 1440 < th dose dependent sin 22 NA
176 11.27 precipitation 0.1 4320 < th dose dependent rect. 11 3
180 11.27 humidity 70.0 1440 > th dose dependent rect. 11 8
197 11.28 humidity 80.0 1440 > th dose independent rect. 10 9
198 11.28 humidity 90.0 720 > th dose dependent no NA NA
199 11.28 radiation 1.0 1440 < th dose dependent sin 15 NA
210 11.28 radiation 1.0 1440 < th dose dependent rect. 13 19
223 11.29 atmosphere 1005.0 14400 > th dose independent rect. 14 1
225 11.29 humidity 80.0 1440 < th dose independent rect. 11 4
229 11.29 humidity 90.0 720 > th dose independent rect. 5 20
234 11.29 radiation 1.0 1440 < th dose dependent rect. 16 4
235 11.29 radiation 1.0 1440 < th dose dependent rect. 14 5
268 11.29 humidity 70.0 1440 > th dose dependent rect. 10 20
282 11.30 humidity 80.0 1440 < th dose independent rect. 11 1
284 11.30 humidity 90.0 1440 > th dose independent rect. 19 2
296 11.30 precipitation 0.1 4320 > th dose dependent rect. 19 3
333 11.31 radiation 10.0 43200 > th dose independent rect. 5 1
337 11.31 atmosphere 1005.0 14400 > th dose independent rect. 14 4
339 11.31 precipitation 0.1 43200 < th dose independent rect. 14 4
355 11.31 radiation 1.0 4320 > th dose independent rect. 7 10
360 11.31 humidity 90.0 720 > th dose dependent sin 16 NA
362 11.31 radiation 1.0 1440 < th dose dependent no NA NA
366 11.31 precipitation 0.1 43200 < th dose dependent rect. 14 4
447 11.31 humidity 90.0 720 > th dose dependent rect. 23 23
455 11.31 radiation 1.0 1440 < th dose dependent rect. 18 23
461 11.32 humidity 80.0 1440 > th dose independent rect. 11 1
462 11.32 humidity 90.0 43200 < th dose independent rect. 19 1
463 11.32 atmosphere 1005.0 14400 < th dose independent rect. 14 1
466 11.32 atmosphere 1005.0 14400 < th dose independent rect. 14 4
467 11.32 precipitation 0.1 43200 > th dose independent rect. 14 4
474 11.32 radiation 1.0 4320 < th dose independent rect. 7 10
475 11.32 radiation 1.0 720 < th dose independent rect. 4 15
476 11.32 radiation 1.0 720 < th dose independent rect. 20 23
493 11.32 humidity 70.0 1440 > th dose dependent rect. 24 19
495 11.32 precipitation 0.1 4320 > th dose dependent rect. 19 19
506 11.32 radiation 1.0 1440 < th dose dependent rect. 16 23
507 11.33 humidity 90.0 43200 > th dose independent rect. 20 1
509 11.33 radiation 10.0 14400 < th dose independent rect. 13 1
559 11.33 precipitation 0.1 4320 > th dose dependent rect. 19 22
578 11.34 radiation 1.0 4320 < th dose independent rect. 16 8
629 11.35 radiation 1.0 4320 < th dose independent rect. 16 3
657 11.35 atmosphere 1005.0 14400 > th dose dependent rect. 13 1
666 11.35 precipitation 0.1 4320 > th dose dependent rect. 18 9
698 11.36 wind 1.0 43200 > th dose independent rect. 1 2
710 11.36 precipitation 0.1 43200 > th dose independent rect. 11 7
711 11.36 precipitation 0.1 43200 < th dose independent rect. 11 7
720 11.36 precipitation 0.1 43200 < th dose dependent rect. 11 7
771 11.37 radiation 1.0 1440 > th dose independent rect. 7 12
783 11.37 wind 9.0 43200 > th dose dependent rect. 18 2
789 11.37 humidity 70.0 1440 > th dose dependent rect. 11 4
836 11.38 atmosphere 1010.0 4320 < th dose independent rect. 9 2
859 11.38 precipitation 0.1 43200 > th dose dependent rect. 14 5
869 11.38 humidity 90.0 720 > th dose dependent rect. 13 13
900 11.39 radiation 1.0 1440 > th dose independent sin 23 NA
902 11.39 radiation 1.0 1440 < th dose independent sin 23 NA
916 11.39 wind 1.0 43200 < th dose independent rect. 1 5
926 11.39 radiation 1.0 1440 < th dose independent rect. 7 12
938 11.39 atmosphere 1005.0 14400 > th dose dependent rect. 16 1
960 11.39 precipitation 0.1 43200 > th dose dependent rect. 11 7
991 11.39 precipitation 0.1 4320 > th dose dependent rect. 18 15