BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0794800 Os03g0794800|AK070933
(988 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G54490.1 | chr1:20350300-20356650 FORWARD LENGTH=948 1087 0.0
AT1G75660.1 | chr1:28408289-28414825 FORWARD LENGTH=1021 516 e-146
AT5G42540.2 | chr5:17007513-17014534 FORWARD LENGTH=1024 501 e-141
>AT1G54490.1 | chr1:20350300-20356650 FORWARD LENGTH=948
Length = 947
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 563/910 (61%), Positives = 651/910 (71%), Gaps = 32/910 (3%)
Query: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
MGVPAFYRWLADRYP+++SD VEEEP + G +PVD+ RPNPNG EFDNLYLDMNGII
Sbjct: 1 MGVPAFYRWLADRYPKSISDVVEEEPTDGGRGDLIPVDITRPNPNGFEFDNLYLDMNGII 60
Query: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSXXX 120
HPCFHPEG+PAP TYD+VFKS+F YIDHLF LVRPRK++Y+AIDGVAPRAKMNQQRS
Sbjct: 61 HPCFHPEGKPAPATYDDVFKSMFEYIDHLFTLVRPRKILYLAIDGVAPRAKMNQQRSRRF 120
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXGRTLVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQ 180
G+ L AKEK+E DSNVITPGTPFM +LS ALQYYIQ
Sbjct: 121 RAAKDAAEAEAEEERLRKDFEMEGQILSAKEKAETCDSNVITPGTPFMAILSVALQYYIQ 180
Query: 181 LRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
RLNH PGW+ VKV+LSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 181 SRLNHNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
Query: 241 SLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRGSGQADKTVELPPIHKKKYQF 300
SLATHEVHFSILREVIT PGQ EKCF+CGQ GH A++C G ++ PIHKKKYQF
Sbjct: 241 SLATHEVHFSILREVITYPGQQEKCFVCGQTGHFASDCPGKSGSNNAAADIPIHKKKYQF 300
Query: 301 LNIWVLREYLEKDLEIVDPPFKINFERXXXXXXXXXXXXGNDFLPHMPTLEIREGAINLL 360
LNIWVLREYL+ +L I DPPF INFER GNDFLPHMPTLEIREGAINLL
Sbjct: 301 LNIWVLREYLQYELAIPDPPFMINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAINLL 360
Query: 361 MNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNEE---R 417
M++YR+EFT+MGGYLTD GEVLLDRVEHFIQ+VAV+E++IFQKR RI++++ NNEE R
Sbjct: 361 MHVYRKEFTAMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRTRIKQSMDNNEEMKQR 420
Query: 418 NRVQTENSEDNQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCWV 477
+R DK+KLGEPGY+ RYYAEKF + +Q+++D+V KYVEGLCWV
Sbjct: 421 SRRDPSEVPPEPIDDKIKLGEPGYKERYYAEKF-STTNPEETEQIKQDMVLKYVEGLCWV 479
Query: 478 MRYYYQGVCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNAL 537
RYYYQGVCSWQWFYPYHYAPFASDLK L +LEITFF+G+PFKPFDQLMGTLPAASSNAL
Sbjct: 480 CRYYYQGVCSWQWFYPYHYAPFASDLKNLPDLEITFFIGEPFKPFDQLMGTLPAASSNAL 539
Query: 538 PKYYGDLMNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETLT 597
P Y LM DP+SP+ FYP DFE+DMNGKRFAWQGIAKLPFI+E+ LLA T+KLEETLT
Sbjct: 540 PGEYRKLMTDPSSPILKFYPADFELDMNGKRFAWQGIAKLPFIEEKLLLAATRKLEETLT 599
Query: 598 DEERFRNRTMFDILYVRETHPLAAQIAFLYQMCSQSPNASYI-IPIDPAASGGMNGFLCL 656
EE+ RN M D+LYV HPL +I Y P + IDP +S GMNGFL
Sbjct: 600 VEEQQRNSVMLDLLYVHPAHPLGQRILQYYHFYQHMPPHECLPWMIDPNSSQGMNGFLWF 659
Query: 657 SERNCYSIVVTSPVKGFNGIAQNRVLNATYLNPQYHKHIPEPPEGVIIPAKILKPSDFKP 716
SERN + V SPV G I QNR LN TYL P H HI EPP G IIP KIL D KP
Sbjct: 660 SERNGFQTRVDSPVNGLPCIEQNRALNVTYLCPAKHSHISEPPRGAIIPDKILTSVDIKP 719
Query: 717 FPILWHEDNS--RRQPRERPQVSGALSGSVLGEAAHRLVKNSLQIKS--GYSAGLLDMP- 771
FP LWHEDNS RRQ R+RPQV GA++G LGEAAHRL+KN+L +KS G ++GL+D
Sbjct: 720 FPPLWHEDNSNRRRQARDRPQVVGAIAGPSLGEAAHRLIKNTLNMKSSTGAASGLIDPNG 779
Query: 772 -YRGAP----YGPGNRPRPAGPLGYERGFVENS--YNGHMSRSVP---NSHPQF----FG 817
YR P YG NRPR GP Y + + ++S Y G + S N+ P++ G
Sbjct: 780 YYRNVPGNYSYGGVNRPRAPGPSPYRKAYDDDSSYYYGKYNNSTQGTFNNGPRYPYPSNG 839
Query: 818 DAQANRQ-NVRILERPNYRNNDSAIHSGMSQLTIQDGPRMHQ----NNRMQNSGFSPNQP 872
NR N +I+ ++N + +GMS L+I+D R Q N+ +P
Sbjct: 840 SQDYNRNYNSKIVAE---QHNRGGLGAGMSGLSIEDNGRSKQLYSSYTEAANANLNPLPS 896
Query: 873 HPNQYAGFPP 882
P Q+ G P
Sbjct: 897 PPTQWIGTQP 906
>AT1G75660.1 | chr1:28408289-28414825 FORWARD LENGTH=1021
Length = 1020
Score = 516 bits (1328), Expect = e-146, Method: Compositional matrix adjust.
Identities = 267/430 (62%), Positives = 318/430 (73%), Gaps = 11/430 (2%)
Query: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGII 60
MGVP+FYRWLA++YP V+D +EEEPVE+E G +PVD +PNPN LE+DNLYLDMNGII
Sbjct: 1 MGVPSFYRWLAEKYPLLVADVIEEEPVEIE-GIKIPVDTSKPNPNNLEYDNLYLDMNGII 59
Query: 61 HPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSXXX 120
HPCFHPE RP+PTT++EVF+ +F YID LF +VRPRKL+YMAIDGVAPRAKMNQQRS
Sbjct: 60 HPCFHPEDRPSPTTFEEVFQCMFDYIDRLFVMVRPRKLLYMAIDGVAPRAKMNQQRSRRF 119
Query: 121 XXXXXXXXXXXXXXXXXXXXXXXGRTLVAKEKSEAIDSNVITPGTPFMFVLSSALQYYIQ 180
GR L K S+ DSNVITPGT FM VLS ALQYY+
Sbjct: 120 RSAKDASDAAAEEERLREEFEREGRRLPPKVDSQVFDSNVITPGTEFMGVLSIALQYYVH 179
Query: 181 LRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 240
LRLNH GW+++KV+LSD+NVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML
Sbjct: 180 LRLNHDVGWKNIKVILSDANVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIML 239
Query: 241 SLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-----SGQADKTVELPPIHK 295
LATHEVHFSILREV+ PGQ E+CFLCGQ+GH A+ C G +G++D+ + K
Sbjct: 240 GLATHEVHFSILREVVYTPGQQERCFLCGQMGHFASNCEGKPKKRAGESDEKGDGNDFVK 299
Query: 296 KKYQFLNIWVLREYLEKDLEIVDPPFKINFERXXXXXXXXXXXXGNDFLPHMPTLEIREG 355
K YQFL+IWVLREYLE ++ I +PPF+I+ ER GNDFLPHMPTLEIREG
Sbjct: 300 KPYQFLHIWVLREYLELEMRIPNPPFEIDLERIVDDFIFICFFVGNDFLPHMPTLEIREG 359
Query: 356 AINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNNE 415
AINLLM +Y++EF S GYLTDG + L RVE FIQ+V E++IFQKR A+Q+
Sbjct: 360 AINLLMAVYKKEFRSFDGYLTDGCKPNLKRVEQFIQAVGSFEDKIFQKR-----AMQHQR 414
Query: 416 ERNRVQTENS 425
+ RV+ + +
Sbjct: 415 QAERVKRDKA 424
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/390 (50%), Positives = 241/390 (61%), Gaps = 26/390 (6%)
Query: 425 SEDNQYVDKVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCWVMRYYYQG 484
+ D DKVKLG+PG+R RYY EKF + +++V++DVV KY EGLCWVM YY +G
Sbjct: 522 NSDTTEEDKVKLGQPGWRERYYEEKFSV-VTPEEMERVRKDVVLKYTEGLCWVMHYYMEG 580
Query: 485 VCSWQWFYPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDL 544
VCSWQWFYPYHYAPFASDLK L E++I F LG PFKPF+QL+G PAASS+ALP+ Y L
Sbjct: 581 VCSWQWFYPYHYAPFASDLKDLGEMDIKFELGTPFKPFNQLLGVFPAASSHALPERYRTL 640
Query: 545 MNDPNSPLKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETLTDEERFRN 604
M DPNSP+ FYP DFE+DMNGKRF+WQGIAKLPFIDERRLL ++E TLTDEE+ RN
Sbjct: 641 MTDPNSPIIDFYPTDFEVDMNGKRFSWQGIAKLPFIDERRLLEAVSEVEFTLTDEEKRRN 700
Query: 605 RTMFDILYVRETHPLAAQIAFLYQMCSQ---SPNASYIIPIDPAASGGMNGFLCLSERNC 661
M D+L++ +H LA + L C Q + + I P S GMNG+L
Sbjct: 701 SRMCDMLFIATSHRLAELVFSLDNHCRQLSARERVDFKVKIKPKLSDGMNGYLTPCSGET 760
Query: 662 YSIVVTSPVKGFNGIAQNRVLNATYLNPQYHKHIPEPPEGVIIPAKILKPSDFKPFPILW 721
+ V SP++G I N+V+ Y P H+HI PP GVI P K + D KP P LW
Sbjct: 761 HPPVFRSPMEGMEDILTNQVICCIYRLPDAHEHITRPPPGVIFPKKTVDIGDLKPPPALW 820
Query: 722 HEDNSRR-----------------QPRERPQVSGALSGSVLGEAAHRLVKNSLQIKSGYS 764
HEDN RR Q R+ P G++SG LG AAHRLV NSLQ+ +
Sbjct: 821 HEDNGRRPMHNNHGMHNNHGMHNNQGRQNP--PGSVSGRHLGNAAHRLVSNSLQMGTDRY 878
Query: 765 AGLLDMPYRGAPYGPGNRPRPAGPLGYERG 794
D+P G Y P P+ P+ Y+ G
Sbjct: 879 QTPTDVPAPGYGYNP---PQYVPPIPYQHG 905
>AT5G42540.2 | chr5:17007513-17014534 FORWARD LENGTH=1024
Length = 1023
Score = 501 bits (1289), Expect = e-141, Method: Compositional matrix adjust.
Identities = 244/437 (55%), Positives = 306/437 (70%), Gaps = 11/437 (2%)
Query: 1 MGVPAFYRWLADRYPQTVSDAVEEEPVELEPGAF-VPVDLRRPNPNGLEFDNLYLDMNGI 59
MGVP+FYRWL RYP T+ + +EEEP+E+ G +P+D +PNPNG E+DNLYLDMNGI
Sbjct: 1 MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60
Query: 60 IHPCFHPEGRPAPTTYDEVFKSIFAYIDHLFGLVRPRKLIYMAIDGVAPRAKMNQQRSXX 119
IHPCFHPE +P+PTT+ EVF+ +F YID LF +VRPRKL++MAIDGVAPRAKMNQQR+
Sbjct: 61 IHPCFHPEDKPSPTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARR 120
Query: 120 XXXXXXXXXXXXXXXXXXXXXXXXGRTLVAKEKSEAIDSNVITPGTPFMFVLSSALQYYI 179
G+ L K S+ DSNVITPGT FM LS AL+YYI
Sbjct: 121 FRAAKDAAEAAAEEEQLREEFEREGKKLPPKVDSQVFDSNVITPGTEFMATLSFALRYYI 180
Query: 180 QLRLNHTPGWQSVKVMLSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIM 239
+RLN PGW+++KV+LSD+NVPGEGEHKIMSYIR +N PG++PNT HCLYGLDADLIM
Sbjct: 181 HVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNPNTHHCLYGLDADLIM 240
Query: 240 LSLATHEVHFSILREVITMPGQHEKCFLCGQVGHLAAECRG-----SGQADKTVELPPIH 294
LSLATHE+HFSILREV+ PG+ KCFLCGQ GH AA+C G +G+ E +
Sbjct: 241 LSLATHEIHFSILREVVFFPGEEGKCFLCGQEGHRAADCEGKIKRKTGEMLDNTEADVVV 300
Query: 295 KKKYQFLNIWVLREYLEKDLEIVDPPFKINFERXXXXXXXXXXXXGNDFLPHMPTLEIRE 354
KK Y+F+NIW+LREYLE D++I P K N +R GNDFLPHMPTLEIRE
Sbjct: 301 KKPYEFVNIWILREYLEHDMQI--PGAKKNLDRLIDDFIFICFFVGNDFLPHMPTLEIRE 358
Query: 355 GAINLLMNIYRREFTSMGGYLTDGGEVLLDRVEHFIQSVAVHEEQIFQKRARIQKAIQNN 414
GAI LLM++Y+ +F S YLTD ++ L VE FI++V ++E QIFQKRA++Q+
Sbjct: 359 GAIELLMSVYKNKFRSAKKYLTDSSKLNLRNVERFIKAVGMYENQIFQKRAQVQQRQSER 418
Query: 415 EERNRVQT---ENSEDN 428
R++ + +N+ DN
Sbjct: 419 FRRDKARDKARDNARDN 435
Score = 308 bits (789), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 161/356 (45%), Positives = 221/356 (62%), Gaps = 27/356 (7%)
Query: 432 DKVKLGEPGYRVRYYAEKFKEEAELKPIDQVQRDVVQKYVEGLCWVMRYYYQGVCSWQWF 491
DKVKL + G+R RYY EKF ++ ++ ++Q++RDVV KY EGLCW+M YYY GVCSW WF
Sbjct: 521 DKVKLNKVGWRERYYEEKFAAKS-VEEMEQIRRDVVLKYTEGLCWIMHYYYHGVCSWNWF 579
Query: 492 YPYHYAPFASDLKCLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYYGDLMNDPNSP 551
YPYHYAPFASDLK L +L+I F LG PFKPF+QL+ LP+AS++ALP+ Y LM +P+SP
Sbjct: 580 YPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSASAHALPECYRSLMTNPDSP 639
Query: 552 LKSFYPKDFEIDMNGKRFAWQGIAKLPFIDERRLLAETQKLEETLTDEERFRNRTMFDIL 611
+ FYP DFEIDMNGKR++WQGI+KLPF++E+RLL ++E++LT+EE RN +FD+L
Sbjct: 640 IADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQVEKSLTNEEIRRNSALFDML 699
Query: 612 YVRETHPLAAQIAFLYQMCSQSPN---ASYIIPIDPA-----------ASGGMNGFLCLS 657
+V +HPL I L + N A+ I IDP S GMNG++
Sbjct: 700 FVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSEHIQKFLDVCSDGMNGYIASC 759
Query: 658 ERNCYSIVVTSPVKGFNGIAQNRVLNATYLNPQYHK--HIPEPPEGVIIPAKILKPSDFK 715
+ S V+G + N+V+ A Y P+ + I + IP K + D K
Sbjct: 760 GGDSQPSCFCSTVEGMEDVLTNQVICAIYKLPEDIRGSEITHQIPRLAIPKKTISLVDLK 819
Query: 716 PFPILWHEDNSRRQPRERPQV--------SGALSGSVLGEAAHRLVKNSLQIKSGY 763
+LWHED +R R P+V G++SG LG+A+HRLV ++ + Y
Sbjct: 820 SGGLLWHEDGDKR--RAPPKVIKIKRYNPEGSISGGRLGKASHRLVLQTINAQPDY 873
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.138 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 23,061,317
Number of extensions: 1076285
Number of successful extensions: 2695
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2677
Number of HSP's successfully gapped: 5
Length of query: 988
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 880
Effective length of database: 8,145,641
Effective search space: 7168164080
Effective search space used: 7168164080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 117 (49.7 bits)