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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0791200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Aldehyde oxidase-2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.9 (0.0444) R2 : 6.97e-06
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00527 (0.0934) R2dN8 : 9e-06 R2N8 : 6.97e-06
σ : 0.835
deviance : 320.39
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
293.61 0.805 2.76 1.72 0.182 -1.06 0.0319 4.07 0.294 17.7 25.49 4623 -- --
295.59 0.801 2.84 0.921 0.147 -0.788 0.0524 -- 0.276 17.4 18.74 5937 -- --
293.61 0.798 2.76 1.72 0.179 -1.06 -- 4.05 0.303 17.8 25.36 4610 -- --
295.6 0.801 2.84 0.929 0.144 -0.799 -- -- 0.272 17.6 18.64 5937 -- --
295.07 0.8 2.76 1.64 -- -1.03 -- 3.65 0.303 -- 24.79 4477 -- --
312.18 0.828 2.89 0.499 0.128 -- 0.44 -- 0.0618 15.3 -- -- -- --
312.45 0.828 2.89 0.507 0.158 -- -- -- 0.0649 17.2 -- -- -- --
296.58 0.802 2.84 0.931 -- -0.82 -- -- 0.268 -- 18.3 5745 -- --
311.45 0.822 2.89 -- 0.155 -0.462 -- -- 0.0435 18 23.57 4736 -- --
313.75 0.828 2.89 0.502 -- -- -- -- 0.0609 -- -- -- -- --
319.22 0.836 2.9 -- 0.149 -- -- -- 0.0084 17.4 -- -- -- --
310.56 0.821 2.9 -- -- -0.443 -- -- -0.0106 -- 28.11 5876 -- --
320.39 0.835 2.9 -- -- -- -- -- 0.00527 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 283.05 wind 1 270 < th dose dependent rect. 11 11
3 284.31 wind 1 270 < th dose independent rect. 11 11
9 287.01 wind 3 90 > th dose dependent rect. 8 1
16 288.69 temperature 25 90 < th dose independent rect. 8 2
17 288.86 temperature 30 10 < th dose dependent rect. 9 1
23 289.33 wind 1 30 < th dose dependent rect. 10 13
28 289.47 wind 1 30 < th dose independent rect. 10 13
35 289.84 atmosphere 995 30 > th dose dependent rect. 13 14
36 289.85 wind 1 270 < th dose independent rect. 11 3
41 290.14 temperature 25 10 < th dose independent rect. 10 1
44 290.21 wind 1 270 < th dose dependent rect. 11 3
46 290.28 wind 1 30 < th dose dependent rect. 8 14
51 290.52 wind 1 30 < th dose dependent rect. 13 10
52 290.53 humidity 80 43200 > th dose independent rect. 5 12
57 290.64 humidity 80 43200 > th dose independent rect. 4 14
60 290.74 humidity 80 43200 < th dose independent rect. 4 14
63 290.76 humidity 80 43200 > th dose independent rect. 6 10
64 290.78 humidity 80 43200 > th dose independent sin 1 NA
68 290.82 humidity 80 43200 < th dose independent rect. 5 12
76 290.94 atmosphere 1005 30 > th dose dependent rect. 13 1
78 290.97 humidity 80 43200 > th dose dependent rect. 6 20
83 290.99 wind 1 30 > th dose independent rect. 10 10
84 290.99 wind 1 30 < th dose independent rect. 8 14
94 291.05 humidity 80 43200 < th dose independent sin 0 NA
95 291.05 wind 1 270 < th dose independent rect. 11 7
96 291.05 humidity 80 43200 < th dose independent rect. 7 9
110 291.13 radiation 1 43200 < th dose dependent rect. 6 11
113 291.14 wind 1 30 < th dose independent rect. 13 10
122 291.17 wind 1 270 < th dose dependent rect. 11 6
123 291.17 humidity 80 43200 > th dose dependent rect. 11 14
128 291.20 radiation 1 43200 > th dose independent rect. 6 9
129 291.20 radiation 1 43200 < th dose independent rect. 6 9
142 291.25 humidity 80 43200 > th dose dependent rect. 10 16
143 291.26 temperature 20 43200 < th dose dependent rect. 12 1
146 291.27 humidity 80 43200 > th dose dependent sin 18 NA
148 291.27 radiation 1 43200 < th dose dependent rect. 8 7
151 291.29 wind 3 90 > th dose independent rect. 8 2
153 291.29 radiation 1 43200 < th dose dependent rect. 10 3
156 291.30 temperature 20 43200 > th dose independent rect. 13 1
167 291.33 temperature 30 14400 > th dose independent rect. 14 2
168 291.33 radiation 1 43200 < th dose independent rect. 10 3
183 291.34 radiation 1 43200 < th dose dependent rect. 9 5
186 291.35 temperature 20 43200 < th dose independent rect. 13 1
192 291.36 temperature 30 14400 < th dose independent rect. 14 2
195 291.36 humidity 80 43200 > th dose dependent rect. 2 16
198 291.37 radiation 1 43200 > th dose independent rect. 10 3
201 291.37 radiation 1 43200 < th dose dependent rect. 6 1
223 291.42 humidity 80 43200 > th dose dependent rect. 17 7
234 291.45 radiation 1 43200 > th dose independent rect. 6 1
235 291.45 radiation 1 43200 < th dose independent rect. 6 1
245 291.47 temperature 25 270 < th dose dependent rect. 6 1
251 291.50 humidity 80 43200 > th dose dependent sin 3 NA
252 291.50 humidity 80 43200 > th dose dependent rect. 13 2
258 291.52 radiation 1 43200 < th dose dependent rect. 12 1
269 291.55 temperature 25 14400 > th dose dependent rect. 11 2
286 291.60 radiation 1 43200 < th dose independent rect. 12 1
297 291.62 humidity 80 43200 > th dose dependent rect. 18 5
345 291.69 atmosphere 1005 90 > th dose dependent rect. 12 11
349 291.70 radiation 1 43200 > th dose independent rect. 12 1
350 291.70 radiation 1 43200 < th dose independent rect. 19 20
383 291.71 humidity 90 43200 > th dose dependent rect. 6 1
391 291.72 atmosphere 1005 90 < th dose independent rect. 18 1
396 291.72 radiation 1 43200 < th dose dependent rect. 12 6
430 291.75 temperature 25 14400 > th dose dependent rect. 22 17
452 291.77 radiation 1 43200 < th dose dependent rect. 10 8
462 291.78 humidity 80 43200 > th dose dependent no NA NA
467 291.78 temperature 20 720 > th dose dependent rect. 21 15
471 291.79 humidity 90 43200 > th dose dependent rect. 21 2
477 291.79 humidity 80 43200 > th dose dependent rect. 15 23
485 291.80 temperature 25 14400 > th dose dependent sin 3 NA
536 291.83 temperature 20 43200 < th dose dependent rect. 12 7
537 291.83 humidity 70 43200 > th dose dependent rect. 5 11
592 291.86 humidity 90 43200 < th dose independent rect. 21 1
606 291.87 temperature 20 43200 < th dose dependent rect. 18 1
608 291.87 temperature 20 43200 < th dose dependent rect. 12 10
629 291.89 radiation 1 43200 < th dose independent rect. 20 12
642 291.90 radiation 1 43200 < th dose independent rect. 12 6
643 291.90 radiation 1 43200 < th dose independent rect. 23 9
685 291.91 radiation 1 43200 > th dose independent rect. 12 6
704 291.92 humidity 90 43200 > th dose independent rect. 18 1
722 291.93 radiation 1 43200 > th dose independent rect. 12 20
802 291.95 radiation 1 43200 < th dose independent sin 2 NA
834 291.96 radiation 1 43200 > th dose independent sin 2 NA
932 291.98 radiation 1 43200 < th dose independent rect. 12 19
936 291.98 temperature 25 14400 > th dose dependent no NA NA
988 292.00 radiation 1 43200 < th dose dependent sin 1 NA