Os03g0788300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0788300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.58 | 0.233 | 10.9 | 1.97 | 0.261 | -0.536 | -0.264 | 2.2 | 0.579 | 4.29 | 21.29 | 1500 | -- | -- |
| 28.71 | 0.25 | 11 | 1.42 | 0.262 | -0.535 | -0.2 | -- | 0.44 | 4.25 | 11.09 | 7247 | -- | -- |
| 24.76 | 0.232 | 10.9 | 1.97 | 0.258 | -0.536 | -- | 2.19 | 0.576 | 4.17 | 21.4 | 1528 | -- | -- |
| 28.83 | 0.25 | 11 | 1.43 | 0.266 | -0.559 | -- | -- | 0.445 | 4.23 | 10.39 | 7334 | -- | -- |
| 27.45 | 0.244 | 10.9 | 2.02 | -- | -0.589 | -- | 2.45 | 0.597 | -- | 21.53 | 1761 | -- | -- |
| 33.9 | 0.273 | 11 | 1.14 | 0.254 | -- | -0.258 | -- | 0.294 | 4.5 | -- | -- | -- | -- |
| 34.07 | 0.273 | 11 | 1.15 | 0.252 | -- | -- | -- | 0.295 | 4.35 | -- | -- | -- | -- |
| 30.06 | 0.256 | 11 | 1.29 | -- | -0.717 | -- | -- | 0.398 | -- | 10.39 | 7334 | -- | -- |
| 48.34 | 0.324 | 11.1 | -- | 0.249 | 0.679 | -- | -- | -0.0622 | 4.24 | 18.05 | 47520 | -- | -- |
| 37.49 | 0.286 | 11 | 1.16 | -- | -- | -- | -- | 0.302 | -- | -- | -- | -- | -- |
| 68.71 | 0.388 | 11 | -- | 0.274 | -- | -- | -- | 0.168 | 4.26 | -- | -- | -- | -- |
| 51.56 | 0.334 | 11.1 | -- | -- | 0.693 | -- | -- | -0.0658 | -- | 18.2 | 47520 | -- | -- |
| 72.76 | 0.398 | 11 | -- | -- | -- | -- | -- | 0.174 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.87 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 11 | 23.90 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 12 | 23.91 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 16 | 23.93 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 45 | 24.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 17 |
| 47 | 24.22 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 7 |
| 56 | 24.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 13 |
| 62 | 24.26 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 63 | 24.27 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 67 | 24.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 9 |
| 72 | 24.29 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 74 | 24.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 102 | 24.34 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 182 | 24.54 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 194 | 24.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 224 | 24.65 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 281 | 24.74 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 286 | 24.74 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 299 | 24.76 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 325 | 24.80 | temperature | 20 | 720 | > th | dose dependent | sin | 9 | NA |
| 358 | 24.84 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 359 | 24.84 | humidity | 90 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 374 | 24.86 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 380 | 24.86 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 396 | 24.87 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 397 | 24.88 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 549 | 25.00 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 603 | 25.05 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 612 | 25.06 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 625 | 25.07 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 628 | 25.07 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 654 | 25.09 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 679 | 25.12 | humidity | 80 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 682 | 25.12 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 691 | 25.13 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 707 | 25.14 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 9 |
| 764 | 25.20 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 795 | 25.23 | humidity | 90 | 14400 | > th | dose dependent | sin | 12 | NA |
| 874 | 25.29 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 889 | 25.30 | humidity | 90 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 915 | 25.32 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 2 |