Os03g0787100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0787100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.02 | 0.493 | 6.31 | 1.71 | 1.21 | -1.51 | 0.153 | -0.889 | 0.561 | 17.1 | 20.39 | 594 | -- | -- |
| 110.52 | 0.49 | 6.29 | 1.9 | 1.23 | -1.57 | -0.017 | -- | 0.616 | 17 | 20.5 | 585 | -- | -- |
| 110.03 | 0.489 | 6.31 | 1.72 | 1.22 | -1.52 | -- | -0.82 | 0.567 | 17 | 20.24 | 577 | -- | -- |
| 110.52 | 0.49 | 6.29 | 1.9 | 1.23 | -1.57 | -- | -- | 0.615 | 17 | 20.5 | 585 | -- | -- |
| 134.36 | 0.54 | 6.29 | 1.69 | -- | -1.34 | -- | -0.832 | 0.545 | -- | 20.4 | 1179 | -- | -- |
| 156.33 | 0.586 | 6.33 | 1.51 | 0.809 | -- | -0.471 | -- | 0.337 | 15.6 | -- | -- | -- | -- |
| 157 | 0.587 | 6.33 | 1.5 | 0.807 | -- | -- | -- | 0.335 | 15.6 | -- | -- | -- | -- |
| 134.08 | 0.539 | 6.27 | 1.92 | -- | -1.35 | -- | -- | 0.609 | -- | 21.51 | 1179 | -- | -- |
| 196.58 | 0.653 | 6.35 | -- | 1.08 | -1.01 | -- | -- | 0.313 | 16.6 | 21.7 | 521 | -- | -- |
| 193.19 | 0.649 | 6.33 | 1.47 | -- | -- | -- | -- | 0.313 | -- | -- | -- | -- | -- |
| 216.59 | 0.688 | 6.37 | -- | 0.777 | -- | -- | -- | 0.167 | 15.6 | -- | -- | -- | -- |
| 221.89 | 0.694 | 6.35 | -- | -- | -0.878 | -- | -- | 0.25 | -- | 24.07 | 1180 | -- | -- |
| 250.18 | 0.738 | 6.37 | -- | -- | -- | -- | -- | 0.15 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.14 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 2 | 109.34 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 10 | 110.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 23 |
| 17 | 110.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 19 | 110.32 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 22 | 110.39 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 23 |
| 25 | 110.44 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 36 | 110.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 44 | 110.74 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 18 |
| 49 | 110.79 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 52 | 110.83 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 20 |
| 122 | 111.45 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 151 | 111.74 | temperature | 20 | 1440 | > th | dose dependent | rect. | 9 | 18 |
| 214 | 112.07 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 224 | 112.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 14 |
| 236 | 112.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 266 | 112.23 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 269 | 112.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 10 |
| 433 | 112.68 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 549 | 112.99 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 582 | 113.09 | temperature | 10 | 1440 | > th | dose dependent | sin | 17 | NA |
| 630 | 113.21 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 1 |
| 690 | 113.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 9 |
| 706 | 113.33 | temperature | 20 | 1440 | > th | dose dependent | sin | 6 | NA |
| 707 | 113.33 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 844 | 113.53 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 23 |