Os03g0785800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Transcription factor PCF6 (Fragment).
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Os03g0785800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Transcription factor PCF6 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.4 | 0.437 | 7.04 | -1.25 | 1.74 | 0.967 | 0.255 | 1.68 | -0.435 | 1.05 | 89 | 1402 | -- | -- |
| 90.34 | 0.443 | 7.03 | -1.4 | 1.73 | 1.03 | 0.307 | -- | -0.445 | 1.02 | 89 | 1375 | -- | -- |
| 86.57 | 0.433 | 7.04 | -1.26 | 1.71 | 0.973 | -- | 1.68 | -0.435 | 1.03 | 88.93 | 1369 | -- | -- |
| 90.57 | 0.443 | 7.03 | -1.43 | 1.72 | 1.02 | -- | -- | -0.458 | 1.02 | 88.77 | 1369 | -- | -- |
| 199.53 | 0.658 | 7 | -1.09 | -- | 2.01 | -- | 1.44 | -0.514 | -- | 88 | 996 | -- | -- |
| 106.95 | 0.485 | 7 | -1.55 | 1.79 | -- | 0.333 | -- | -0.344 | 1.13 | -- | -- | -- | -- |
| 107.41 | 0.485 | 7 | -1.56 | 1.78 | -- | -- | -- | -0.346 | 1.12 | -- | -- | -- | -- |
| 200.83 | 0.66 | 7.03 | -1.24 | -- | 1.98 | -- | -- | -0.536 | -- | 88 | 984 | -- | -- |
| 142.02 | 0.555 | 7.01 | -- | 1.8 | 1.31 | -- | -- | -0.351 | 1.08 | 88 | 1522 | -- | -- |
| 304.9 | 0.816 | 6.98 | -1.49 | -- | -- | -- | -- | -0.31 | -- | -- | -- | -- | -- |
| 171.74 | 0.613 | 6.96 | -- | 1.76 | -- | -- | -- | -0.172 | 1.08 | -- | -- | -- | -- |
| 240.73 | 0.723 | 7 | -- | -- | 2.16 | -- | -- | -0.42 | -- | 87.77 | 994 | -- | -- |
| 363.79 | 0.89 | 6.94 | -- | -- | -- | -- | -- | -0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.10 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 2 | 82.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 4 | 82.31 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 5 | 82.31 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 6 | 82.31 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 7 | 82.43 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 9 | 82.46 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 10 | 82.46 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 4 |
| 12 | 82.48 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 16 | 82.60 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 18 | 82.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 19 | 82.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 22 | 82.72 | wind | 3.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 28 | 82.87 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 29 | 82.89 | wind | 3.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 30 | 82.90 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 31 | 82.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 32 | 83.06 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 40 | 83.17 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 4 |
| 42 | 83.22 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 48 | 83.29 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 11 | 9 |
| 51 | 83.30 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 11 | 9 |
| 53 | 83.30 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 11 | 9 |
| 67 | 83.38 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 79 | 83.41 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 104 | 83.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 109 | 83.52 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 110 | 83.52 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 16 |
| 157 | 83.73 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 21 | NA |
| 163 | 83.74 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 21 | NA |
| 165 | 83.74 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 21 | NA |
| 182 | 83.82 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 201 | 83.85 | humidity | 90.0 | 720 | < th | dose independent | rect. | 17 | 11 |
| 214 | 83.90 | humidity | 90.0 | 720 | < th | dose independent | rect. | 17 | 13 |
| 227 | 83.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 245 | 84.00 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 270 | 84.09 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 285 | 84.12 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 289 | 84.15 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 290 | 84.15 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 297 | 84.16 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 303 | 84.17 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 5 |
| 333 | 84.21 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 13 |
| 352 | 84.24 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 8 | 8 |
| 375 | 84.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 387 | 84.29 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 396 | 84.30 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 402 | 84.30 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 12 |
| 426 | 84.33 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 459 | 84.38 | humidity | 90.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 467 | 84.39 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 472 | 84.40 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 20 |
| 473 | 84.40 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 503 | 84.46 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 506 | 84.46 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 563 | 84.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 591 | 84.53 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 599 | 84.55 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 0 | NA |
| 602 | 84.56 | radiation | 10.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 607 | 84.57 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 8 | 11 |
| 620 | 84.57 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 621 | 84.57 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 22 |
| 626 | 84.58 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 628 | 84.58 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 6 | 3 |
| 648 | 84.60 | temperature | 30.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 691 | 84.62 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 12 |
| 727 | 84.66 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 20 |
| 732 | 84.67 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 15 |
| 734 | 84.68 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 740 | 84.68 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 19 |
| 744 | 84.69 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 756 | 84.70 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 13 | 23 |
| 771 | 84.72 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 773 | 84.72 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 6 | 15 |
| 779 | 84.72 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 6 | 21 |
| 788 | 84.73 | radiation | 10.0 | 14400 | < th | dose independent | no | NA | NA |
| 789 | 84.73 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 906 | 84.75 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 911 | 84.76 | temperature | 30.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 912 | 84.76 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 938 | 84.78 | humidity | 90.0 | 720 | < th | dose independent | sin | 13 | NA |
| 991 | 84.81 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 23 |