Os03g0784100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Patatin family protein.
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Os03g0784100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Patatin family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 175.11 | 0.622 | 8.41 | -1.71 | 1.83 | -0.757 | -8.06 | 8.32 | -0.294 | 1.31 | 0.539 | 293 | -- | -- |
| 189.15 | 0.641 | 8.31 | -1.33 | 2 | -2.39 | 1.34 | -- | -0.331 | 4.37 | 0.01635 | 820 | -- | -- |
| 204.87 | 0.667 | 8.49 | -1.55 | 1.12 | 0.00135 | -- | 7.26 | -0.566 | 0.746 | 0.1011 | 2152 | -- | -- |
| 192.62 | 0.646 | 8.32 | -1.58 | 2.16 | -2.97 | -- | -- | -0.3 | 5.11 | 0.01001 | 888 | -- | -- |
| 225.98 | 0.7 | 8.49 | -1.79 | -- | 1.68 | -- | 7.88 | -0.304 | -- | 0.1926 | 1624 | -- | -- |
| 209.93 | 0.679 | 8.34 | -1.19 | 1.07 | -- | 0.671 | -- | -0.159 | 0.779 | -- | -- | -- | -- |
| 211.79 | 0.682 | 8.34 | -1.21 | 1.07 | -- | -- | -- | -0.162 | 0.667 | -- | -- | -- | -- |
| 223.15 | 0.699 | 8.31 | -1.18 | -- | 0.751 | -- | -- | -0.11 | -- | 4.11 | 1762 | -- | -- |
| 248.62 | 0.734 | 8.32 | -- | 1.47 | -1.08 | -- | -- | -0.063 | 2.91 | 0.05818 | 734 | -- | -- |
| 283 | 0.786 | 8.32 | -1.17 | -- | -- | -- | -- | -0.143 | -- | -- | -- | -- | -- |
| 250.56 | 0.74 | 8.31 | -- | 1.05 | -- | -- | -- | -0.0266 | 0.612 | -- | -- | -- | -- |
| 256.2 | 0.748 | 8.29 | -- | -- | 0.792 | -- | -- | 0.00922 | -- | 6.569 | 1215 | -- | -- |
| 319.41 | 0.834 | 8.29 | -- | -- | -- | -- | -- | -0.0125 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 164.14 | wind | 7.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 2 | 164.41 | wind | 7.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 3 | 165.29 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 4 | 165.87 | radiation | 1.0 | 720 | < th | dose dependent | sin | 2 | NA |
| 12 | 168.48 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 13 | 168.87 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 5 | 13 |
| 19 | 170.04 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 6 | 7 |
| 30 | 170.54 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 3 | 14 |
| 38 | 170.83 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 9 |
| 39 | 170.92 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 4 | 11 |
| 43 | 171.14 | temperature | 10.0 | 270 | > th | dose dependent | sin | 1 | NA |
| 60 | 171.50 | radiation | 1.0 | 720 | < th | dose independent | sin | 2 | NA |
| 68 | 171.68 | wind | 5.0 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 74 | 171.84 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 78 | 171.98 | humidity | 90.0 | 90 | > th | dose independent | sin | 1 | NA |
| 79 | 171.99 | temperature | 30.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 82 | 172.11 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 16 |
| 87 | 172.29 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 88 | 172.30 | humidity | 90.0 | 90 | > th | dose dependent | sin | 23 | NA |
| 91 | 172.39 | humidity | 90.0 | 10 | > th | dose independent | sin | 1 | NA |
| 92 | 172.39 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 1 | 15 |
| 93 | 172.40 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 96 | 172.48 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 97 | 172.49 | temperature | 20.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 109 | 172.66 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 3 | 9 |
| 150 | 173.11 | humidity | 90.0 | 30 | > th | dose independent | rect. | 4 | 8 |
| 166 | 173.27 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 179 | 173.36 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 23 | 4 |
| 180 | 173.36 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 23 | 4 |
| 210 | 173.56 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 6 | 7 |
| 216 | 173.61 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 6 | 5 |
| 231 | 173.74 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 24 | 3 |
| 249 | 174.00 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 17 | 20 |
| 256 | 174.10 | wind | 7.0 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 260 | 174.12 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 16 | 21 |
| 270 | 174.17 | radiation | 1.0 | 720 | < th | dose independent | rect. | 3 | 14 |
| 295 | 174.46 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 7 | 10 |
| 308 | 174.52 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 309 | 174.52 | humidity | 90.0 | 270 | > th | dose independent | rect. | 23 | 21 |
| 331 | 174.71 | radiation | 1.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 400 | 175.20 | wind | 9.0 | 720 | > th | dose independent | rect. | 22 | 12 |
| 403 | 175.20 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 411 | 175.23 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 12 |
| 412 | 175.23 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 4 | 9 |
| 424 | 175.28 | wind | 9.0 | 720 | > th | dose independent | rect. | 1 | 9 |
| 441 | 175.38 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 442 | 175.38 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 24 | 3 |
| 448 | 175.43 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 10 | 7 |
| 459 | 175.48 | temperature | 10.0 | 720 | > th | dose dependent | sin | 4 | NA |
| 475 | 175.54 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 9 |
| 488 | 175.60 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 16 |
| 498 | 175.65 | temperature | 30.0 | 720 | < th | dose dependent | sin | 5 | NA |
| 515 | 175.70 | radiation | 1.0 | 270 | < th | dose independent | rect. | 7 | 3 |
| 519 | 175.74 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 11 |
| 521 | 175.75 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 2 |
| 548 | 175.84 | radiation | 1.0 | 720 | < th | dose independent | rect. | 1 | 16 |
| 563 | 175.90 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 595 | 176.01 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 596 | 176.01 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 600 | 176.02 | humidity | 90.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 604 | 176.05 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 12 | 5 |
| 612 | 176.10 | humidity | 90.0 | 90 | < th | dose independent | rect. | 23 | 20 |
| 621 | 176.12 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 14 |
| 648 | 176.19 | wind | 7.0 | 720 | > th | dose independent | rect. | 7 | 1 |
| 657 | 176.22 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 658 | 176.22 | humidity | 90.0 | 90 | > th | dose independent | rect. | 3 | 20 |
| 660 | 176.23 | humidity | 90.0 | 90 | < th | dose independent | sin | 1 | NA |
| 665 | 176.25 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 23 |
| 692 | 176.42 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 21 |
| 706 | 176.47 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 717 | 176.51 | wind | 7.0 | 720 | > th | dose independent | rect. | 1 | 7 |
| 719 | 176.51 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 755 | 176.61 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 756 | 176.61 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 795 | 176.69 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 804 | 176.70 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 16 | 2 |
| 806 | 176.70 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 1 | 21 |
| 828 | 176.79 | radiation | 1.0 | 270 | < th | dose dependent | no | NA | NA |
| 833 | 176.79 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 834 | 176.80 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 854 | 176.86 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 14 | 3 |
| 904 | 177.03 | temperature | 15.0 | 720 | > th | dose independent | sin | 8 | NA |
| 915 | 177.06 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 23 |
| 957 | 177.18 | wind | 7.0 | 720 | > th | dose dependent | rect. | 7 | 1 |
| 971 | 177.22 | wind | 7.0 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 980 | 177.25 | wind | 7.0 | 720 | > th | dose dependent | rect. | 1 | 7 |
| 983 | 177.26 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 12 | 5 |