BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0784100 Os03g0784100|Os03g0784100
(462 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54950.1 | chr3:20359076-20360774 REVERSE LENGTH=489 292 3e-79
AT2G39220.1 | chr2:16375055-16376663 REVERSE LENGTH=500 290 1e-78
AT4G29800.2 | chr4:14590862-14592536 REVERSE LENGTH=527 266 2e-71
AT3G63200.1 | chr3:23346140-23347379 FORWARD LENGTH=385 179 2e-45
AT4G37060.2 | chr4:17461573-17463704 REVERSE LENGTH=436 68 1e-11
AT4G37050.1 | chr4:17457261-17459642 REVERSE LENGTH=429 62 6e-10
AT4G37070.2 | chr4:17464916-17467058 REVERSE LENGTH=415 59 6e-09
AT5G43590.1 | chr5:17509368-17511477 REVERSE LENGTH=402 57 3e-08
>AT3G54950.1 | chr3:20359076-20360774 REVERSE LENGTH=489
Length = 488
Score = 292 bits (747), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 182/429 (42%), Positives = 228/429 (53%), Gaps = 27/429 (6%)
Query: 12 LDVDKLTYEIFSILESKFLFGYDDPKLVFSGGDEPQGAVKGTLARGPAVVERGKVCVLSI 71
+D DKL+YEIFSILESKFLFGYDD K EP +V G +RGK+C+LSI
Sbjct: 54 IDTDKLSYEIFSILESKFLFGYDDSK------PEPANSV----VAGSIKNQRGKICILSI 103
Query: 72 DXXXXXXXXXXXXXXXXXXXXXXRRRTGDETARLADFFDXXXXXXXXXXXXXXXXXXXXD 131
D + ++GD AR+AD+FD
Sbjct: 104 DGGGMRGILPGKALAYLEHAL--KSKSGDPNARIADYFDVAAGSGIGGIYTAMLFGSRDG 161
Query: 132 GRPMFSAEDALAFLMRSLRRGWSXXXXXXXXXXIRALFRRPGAAFRKV----FGDLTLRD 187
RP+F A+D FL R+ + + + A +KV F +LTL+D
Sbjct: 162 NRPIFKADDTWQFLTRNAKGLYGGAGILKRVLRTGSGCCSGTAKLKKVMKESFSELTLKD 221
Query: 188 TVRPVLVPCYDLASAGPFLFSRADAVETAAYDFRLRDVCAATCAGSDGSASAVEVRSSDG 247
T++PVL+PCYDL S+GPFLFSRADA+ET YDFRL +VC AT A G VE++S DG
Sbjct: 222 TLKPVLIPCYDLKSSGPFLFSRADALETDGYDFRLSEVCRATWA-EPGVFEPVEMKSVDG 280
Query: 248 ATRIAAVGGGLALGNPTAAAITHVLNNKREFPLAAGVEDLLVISIGSG-------ECDNR 300
T+ AVGGGLA+ NPTAAAITHVL+NK+EFP GVEDLLV+S+G G E D
Sbjct: 281 QTKCVAVGGGLAMSNPTAAAITHVLHNKQEFPFVRGVEDLLVLSLGMGQLLDVSYEYDRI 340
Query: 301 PTGGAAASTSEIVRIAAEGXXXXXXXXXXXXFGHNRTNNYIRIQAMGSPRASRX-XXXXX 359
A I+ +G FGH R++NY+RIQA GS
Sbjct: 341 IKWKAKHWARPAALISNDGAADTVDQAVAMAFGHCRSSNYVRIQANGSNLGPWSPNMDTD 400
Query: 360 XXXXXXXXXXXVAEEMLSQKNVESVLFRGKKLAEQTNAEKLEWFAHELVKERDRRRTAGA 419
VAEEML QKNVESVLF GK++ EQ+N EKL+W A ELV E RR +
Sbjct: 401 PSGSNVNMLMGVAEEMLKQKNVESVLFGGKRIDEQSNFEKLDWLAGELVLEHQRRNS--R 458
Query: 420 LAPAVVKQQ 428
+AP V +Q
Sbjct: 459 IAPTVAFKQ 467
>AT2G39220.1 | chr2:16375055-16376663 REVERSE LENGTH=500
Length = 499
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 184/448 (41%), Positives = 234/448 (52%), Gaps = 41/448 (9%)
Query: 12 LDVDKLTYEIFSILESKFLFGYDDP-KLVFSGGDEP---------------QGAVKGTLA 55
++ DKL+YEIFSILESKFLFGYDD KL+ S +P G V GT+
Sbjct: 43 IETDKLSYEIFSILESKFLFGYDDDLKLMESRSRDPSPEQETASPAMVEALNGVVPGTVK 102
Query: 56 RGPAVVERGKVCVLSIDXXXXXXXXXXXXXXXXXXXXXXRRRTGDETARLADFFDXXXXX 115
+RGKVCVLSID + ++GD AR+AD+FD
Sbjct: 103 N-----QRGKVCVLSIDSGGMRGIIPGKALAYLEHAL--KSKSGDPNARIADYFDVASGS 155
Query: 116 XXXXXXXXXXXXXXXDGRPMFSAEDALAFLMRSLRRGWSXXXXXXXXXXIRALFR----- 170
RP+F AED FL + ++ ++
Sbjct: 156 GIGGIFTAMLFASSDGNRPIFKAEDTWRFLAMKGKSFYNKSPPGILNRVMKTGSGGSGGS 215
Query: 171 --RPGAAFRKVFGDLTLRDTVRPVLVPCYDLASAGPFLFSRADAVETAAYDFRLRDVCAA 228
+ A ++ F +LTL+DT++PVL+PCYDL S+ PFLFSRADA+ET YDF+L +VC A
Sbjct: 216 GSKLEKAMKESFEELTLKDTLKPVLIPCYDLTSSAPFLFSRADALETDGYDFKLWEVCRA 275
Query: 229 TCAGSDGSASAVEVRSSDGATRIAAVGGGLALGNPTAAAITHVLNNKREFPLAAGVEDLL 288
T A G VE+RS DG TR AV GGLA+ NPTAAAITHVL+NK+EFP GVEDLL
Sbjct: 276 TWA-EPGVFEPVEMRSVDGKTRCVAVDGGLAMSNPTAAAITHVLHNKQEFPFVRGVEDLL 334
Query: 289 VISIGSGE-------CDNRPTGGAAASTSEIVRIAAEGXXXXXXXXXXXXFGHNRTNNYI 341
V+S+G+G+ CD A VRI+A+G FG R +NY+
Sbjct: 335 VLSLGTGQLVDVKYDCDKVMKWKAKHWARPAVRISADGAADTVDQAVSMAFGQCRRSNYV 394
Query: 342 RIQAMGSPRA-SRXXXXXXXXXXXXXXXXXVAEEMLSQKNVESVLFRGKKLAEQTNAEKL 400
RIQA GS + VAEEML QKN ESVLF GKK+ E++N EKL
Sbjct: 395 RIQANGSSFGPCKPNIDTDASPSNVNMLVGVAEEMLKQKNAESVLFGGKKINEESNYEKL 454
Query: 401 EWFAHELVKERDRRRTAGALAPAVVKQQ 428
+W A ELV E RR + +AP V +Q
Sbjct: 455 DWLAGELVLEHQRR--SCRIAPTVAFKQ 480
>AT4G29800.2 | chr4:14590862-14592536 REVERSE LENGTH=527
Length = 526
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 171/458 (37%), Positives = 225/458 (49%), Gaps = 49/458 (10%)
Query: 15 DKLTYEIFSILESKFLFGYDDPKLVF-------SGGDE----------PQGAVKGTLARG 57
DKL YEIFSILESKFLFGY+DP+L++ G E P G V
Sbjct: 53 DKLNYEIFSILESKFLFGYEDPRLLWIPQSPLRPGDSEAGPSPRSPLTPNGVVLPGTPSS 112
Query: 58 PAVVERGKVCVLSIDXXXXXXXXXXXXXXXXXXXXXXRRRTGDETARLADFFDXXXXXXX 117
RG++CVLSID + ++GD AR+AD+FD
Sbjct: 113 SFRSPRGRICVLSIDGGGMRGLLAGKSLIYLEQML--KEKSGDPNARIADYFDVAAGSGV 170
Query: 118 XXXXXXXXXXXXXDGRPMFSAEDALAFLMRS---LRRGWSXXXXXXXXXXIRALFR---- 170
RP+F AED FL+ + R S I+ + R
Sbjct: 171 GGVFAAMIFATRDGNRPIFKAEDTWKFLVENAEGFYRSGSGSGGGGAGAAIKRVIRSGSG 230
Query: 171 -----------RPGAAFRKVFGDLTLRDTVRPVLVPCYDLASAGPFLFSRADAVETAAYD 219
+ A + F DLTL+DT++P+L+ CYDL+S PFLFSRADA+E+ ++D
Sbjct: 231 SGSSSVTAATAKLEKAMKASFADLTLKDTLKPILISCYDLSSTAPFLFSRADALESDSFD 290
Query: 220 FRLRDVCAATCAGSDGSASAVEVRSSDGATRIAAVGGGLALGNPTAAAITHVLNNKREFP 279
FRLRD+C AT A G+ V S DG TR AVGGGLA+ NPTAAAITHV +NK+EFP
Sbjct: 291 FRLRDICRATWA-EPGTFDPVRTCSVDGKTRCVAVGGGLAMSNPTAAAITHVFHNKQEFP 349
Query: 280 LAAGVEDLLVISIGSGEC-------DNRPTGGAAASTSEIVRIAAEGXXXXXXXXXXXXF 332
GVEDLLV+S+G+G+ + + RI+ +G F
Sbjct: 350 AVKGVEDLLVLSLGTGQLFEVNYDYEQVKNWRVKEWARPMARISGDGSAEFVDQAVAMGF 409
Query: 333 GHNRTNNYIRIQAMGSPR--ASRXXXXXXXXXXXXXXXXXVAEEMLSQKNVESVLFRGKK 390
G R++NY+RIQ R A +A+EML Q NVESVLF K+
Sbjct: 410 GPYRSSNYVRIQQANGSRLGACGPNVDTDPRAENVKKLTEIADEMLKQNNVESVLFGSKR 469
Query: 391 LAEQTNAEKLEWFAHELVKERDRRRTAGALAPAVVKQQ 428
+ E +N+EK+EWFA ELV E+ RR +P V +Q
Sbjct: 470 IGEMSNSEKIEWFASELVIEQQRRSVRA--SPTVTLKQ 505
>AT3G63200.1 | chr3:23346140-23347379 FORWARD LENGTH=385
Length = 384
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 131/409 (32%), Positives = 187/409 (45%), Gaps = 61/409 (14%)
Query: 11 QLDVDKLTYEIFSILESKFLFGYDDPKLVFSGGDEPQGAVKGTLARGPAVVERGKVCVLS 70
++D+ K+T +IF+ LE K+L D + K +LS
Sbjct: 2 EMDLSKVTLDIFTKLEQKWLSHCDSSR---------------------------KTRILS 34
Query: 71 IDXXXXXXXXXXXXXXXXXXXXXXRRRTGDETARLADFFDXXXXXXXXXXXXXXXXXXXX 130
ID R +TGD A ++DFFD
Sbjct: 35 IDGGGTTGIVAAASILHLEHQI--RLQTGDPHAHISDFFDIVAGTGIGGILAALLVADDG 92
Query: 131 DGRPMFSAEDALAFLMRS----LRRGWSXXXXXXXXXXIRALFRRPGAAFRKVFGD-LTL 185
GRPMF+A DA+ F+ ++ +++ R AFR+ G LT+
Sbjct: 93 SGRPMFTARDAVKFVAEKNSELFEIRYTGVFRRNKRYSGKSMERVLETAFRREDGKVLTM 152
Query: 186 RDTVRPVLVPCYDLASAGPFLFSRADAVETAAYDFRLRDVCAATCAGSDGSASAVEVRSS 245
+DT +P+LVPCYDL ++ PF+FSRA A E+ ++DF L VC AT A + V S
Sbjct: 153 KDTCKPLLVPCYDLKTSAPFVFSRAGASESPSFDFELWKVCRATSA-TPSLFKPFSVVSV 211
Query: 246 DGATRIAAVGGGLALGNPTAAAITHVLNNKREFPLAAGVEDLLVISIGSGECDNRPTGG- 304
DG T +AV GGL + NPTAAA+THVL+NKR+FP GV+DLLV+S+G+G + G
Sbjct: 212 DGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVNGVDDLLVLSLGNGPSTMSSSPGR 271
Query: 305 -----AAASTSEIVRIAAEGXXXXXXXXXXXXFGHNRTNNYIRIQAMGSPRASRXXXXXX 359
STS +V I +G F NRT +Y+RIQA G
Sbjct: 272 KLRRNGDYSTSSVVDIVVDGVSDTVDQMLGNAFCWNRT-DYVRIQANGLTSGG------- 323
Query: 360 XXXXXXXXXXXVAEEMLSQKNVESVLFRGKKLAEQTNAEKLEWFAHELV 408
AEE+L ++ VE+ F K++ ++N E++E F LV
Sbjct: 324 ------------AEELLKERGVETAPFGVKRILTESNGERIEGFVQRLV 360
>AT4G37060.2 | chr4:17461573-17463704 REVERSE LENGTH=436
Length = 435
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 20/213 (9%)
Query: 101 ETARLADFFDXXXXXXXXXXXXXXXXXXXXDGRPMFSAEDALAFLMRSLRRGWSXXXXXX 160
E R+AD+FD +GRP F+A++ + F + + +
Sbjct: 72 EHVRVADYFDVIAGTSTGGLVTAMLTAPDENGRPRFAAKEIVPFYLEHCPKIFPQPTGVL 131
Query: 161 XXXXIRALF----RRPGAAFR----KVFGDLTLRDTVRPVLVPCYDLASAGPFLFSRADA 212
+ G R K+ G+ LR T+ V++P +D+ + P +FS A
Sbjct: 132 ALLPKLPKLLSGPKYSGNYLRTTLGKLLGETKLRQTLTNVVIPTFDIKTLQPTIFSSYQA 191
Query: 213 VETAAYDFRLRDVCAATCAG-SDGSASAVEVRSSDGATR-IAAVGGGLALGNPTAAAIT- 269
+ + D ++ D+C T A + S G TR V GG+ NPT A+T
Sbjct: 192 LTDPSLDVKVSDICIGTSAAPTYFPPYYFSNEDSQGKTRHFNLVDGGVTANNPTLVAMTA 251
Query: 270 ---HVLNNKREF----PLAAGVEDLLVISIGSG 295
++NN + PL G + LVISIG+G
Sbjct: 252 VTKQIVNNNPDMGTLNPL--GYDQFLVISIGTG 282
>AT4G37050.1 | chr4:17457261-17459642 REVERSE LENGTH=429
Length = 428
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 88/232 (37%), Gaps = 40/232 (17%)
Query: 101 ETARLADFFDXXXXXXXXXXXXXXXXXXXXDG-------RPMFSAEDALAFLM------- 146
E ARL D+FD G RP+F A++ + F +
Sbjct: 67 EEARLVDYFDVISGTSTGGLIVAMLTAQDQSGGHSRNSNRPLFEAKEIVPFYLKHSPKIF 126
Query: 147 ---RSLRRGWSXXXXXXXXXXIRALFRRP---GAAFRKV----FGDLTLRDTVRPVLVPC 196
R + GW I L P G + GD L ++ V++PC
Sbjct: 127 PQPRGIFCGWGET--------IVRLVGGPKFNGKYLHDLVEGFLGDTKLTQSLTNVVIPC 178
Query: 197 YDLASAGPFLFSRADAVETAAYDFRLRDVCAATCAGSD-GSASAVEVRSSDGATR-IAAV 254
+D+ P +FS AV A + +L D+C +T A A S+G +
Sbjct: 179 FDIKKLQPVIFSSYQAVNNQAMNAKLSDICISTSAAPTFFPAHRFTNEDSEGIKHEFNLI 238
Query: 255 GGGLALGNPTAAAITHVLNN-KREFPLAAGVEDL-----LVISIGSGECDNR 300
GG+A NPT AI V ++ P+ + L LVISIG+G N+
Sbjct: 239 DGGIAANNPTLCAIAEVTKQIIKKNPVMGDISPLDFTRFLVISIGTGSIRNQ 290
>AT4G37070.2 | chr4:17464916-17467058 REVERSE LENGTH=415
Length = 414
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 80/213 (37%), Gaps = 20/213 (9%)
Query: 101 ETARLADFFDXXXXXXXXXXXXXXXXXXXXDGRPMFSAEDALAFLMRSLRRGWSXXXXXX 160
E ARLAD+FD GRP F+A+D + F + + +
Sbjct: 51 EEARLADYFDVIAGTSTGGLVTAMLTVPDETGRPHFAAKDIVPFYLEHCPKIFPQPTGVL 110
Query: 161 XXXXIRALF----RRPGAAFR----KVFGDLTLRDTVRPVLVPCYDLASAGPFLFSRADA 212
+ G R K+ G+ L T+ +++P +D+ P +FS
Sbjct: 111 ALLPKLPKLLSGPKYSGKYLRNLLSKLLGETRLHQTLTNIVIPTFDIKKLQPTIFSSYQL 170
Query: 213 VETAAYDFRLRDVCAATCAGSDGSASAV--EVRSSDGATRIAAVGGGLALGNPTAAAIT- 269
+ + D ++ D+C T A S T V G + NPT A+T
Sbjct: 171 LVDPSLDVKVSDICIGTSAAPTFFPPHYFSNEDSQGNKTEFNLVDGAVTANNPTLVAMTA 230
Query: 270 ---HVLNNKREF----PLAAGVEDLLVISIGSG 295
++ N + PL G + LVISIG+G
Sbjct: 231 VSKQIVKNNPDMGKLKPL--GFDRFLVISIGTG 261
>AT5G43590.1 | chr5:17509368-17511477 REVERSE LENGTH=402
Length = 401
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 85/216 (39%), Gaps = 28/216 (12%)
Query: 99 GDETARLADFFDXXXXXXXXXXXXXXXXXXXXDGRPMFSAEDALAFLMRSL------RRG 152
DE+ RLAD+FD GRP+++A+D + F + +
Sbjct: 45 NDESVRLADYFDVIAGTSTGGLMTAMLTAPNDSGRPLYAAKDIVPFYLEESPKIFYGSKW 104
Query: 153 WSXXXXXXXXXXIRALFR--RPGAAFR----KVFGDLTLRDTVRPVLVPCYDLASAGPFL 206
W + ALFR G ++ G+ L T+ V++P +D+ P +
Sbjct: 105 WDPSA-------LWALFRPKYNGEYLHTRLGEILGETKLDQTLTNVVIPTFDIKKLQPTI 157
Query: 207 FSRADAVETAAYDFRLRDVCAATCAGSDGSASAVEVRSSDGATRIAAVGGGLALGNPTAA 266
FS A + + +L D+C T A + +D + GG+ +PT
Sbjct: 158 FSSYHASVDPSLNAKLSDICIGTSAAP-FYLPPYKFPENDKMRTFNLIDGGVTANDPTLV 216
Query: 267 AITHVLNNKR--EFPLAAG-----VEDLLVISIGSG 295
+T ++ K + P G E +VISIG+G
Sbjct: 217 GMT-AMSRKSIIKHPDMDGFKPLEYEKYIVISIGTG 251
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,819,112
Number of extensions: 221581
Number of successful extensions: 528
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 500
Number of HSP's successfully gapped: 8
Length of query: 462
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 360
Effective length of database: 8,310,137
Effective search space: 2991649320
Effective search space used: 2991649320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)