Os03g0784000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FAD dependent oxidoreductase family protein.
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Os03g0784000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : FAD dependent oxidoreductase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.17 | 0.376 | 10.6 | -1.06 | 1.08 | 0.179 | 1.13 | 0.912 | -0.00141 | 4.88 | 20.7 | 37 | -- | -- |
| 67.27 | 0.385 | 10.6 | -1.28 | 1.08 | 0.153 | 0.68 | -- | -0.0762 | 4.93 | 23.44 | 108 | -- | -- |
| 66.86 | 0.384 | 10.6 | -1.12 | 1.08 | 0.155 | -- | 0.696 | -0.0126 | 4.91 | 20.6 | 42 | -- | -- |
| 67.89 | 0.384 | 10.6 | -1.27 | 1.09 | 0.168 | -- | -- | -0.0787 | 4.87 | 24 | 33 | -- | -- |
| 126.41 | 0.524 | 10.6 | -1.06 | -- | -0.0564 | -- | 0.535 | 0.0452 | -- | 20.59 | 67 | -- | -- |
| 68.92 | 0.389 | 10.6 | -1.21 | 1.05 | -- | 0.694 | -- | -0.0135 | 5.09 | -- | -- | -- | -- |
| 70.12 | 0.392 | 10.6 | -1.21 | 1.05 | -- | -- | -- | -0.0169 | 5.04 | -- | -- | -- | -- |
| 95.81 | 0.456 | 10.6 | -1 | -- | -0.8 | -- | -- | 0.127 | -- | 28.5 | 346 | -- | -- |
| 80.48 | 0.418 | 10.5 | -- | 0.913 | -0.802 | -- | -- | 0.416 | 4.84 | 22.2 | 47520 | -- | -- |
| 128.24 | 0.529 | 10.6 | -1.17 | -- | -- | -- | -- | 0.00993 | -- | -- | -- | -- | -- |
| 108.88 | 0.488 | 10.6 | -- | 1.03 | -- | -- | -- | 0.118 | 5.08 | -- | -- | -- | -- |
| 123.43 | 0.517 | 10.5 | -- | -- | -0.919 | -- | -- | 0.228 | -- | 28.4 | 365 | -- | -- |
| 164.65 | 0.599 | 10.6 | -- | -- | -- | -- | -- | 0.14 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.16 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 62.16 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 3 | 62.53 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 4 | 62.57 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 5 | 62.57 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 10 | 62.77 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 45 | 63.22 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 6 |
| 46 | 63.23 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 2 |
| 53 | 63.39 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 54 | 63.46 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 8 |
| 55 | 63.46 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 61 | 63.53 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 64 | 63.56 | humidity | 80.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 71 | 63.71 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 77 | 63.77 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 82 | 63.80 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 84 | 63.80 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 86 | 63.80 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 138 | 63.80 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 140 | 63.80 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 142 | 63.80 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 195 | 63.81 | temperature | 20.0 | 30 | > th | dose independent | rect. | 9 | 21 |
| 199 | 63.86 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 208 | 63.90 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 214 | 63.95 | wind | 7.0 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 216 | 63.95 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 219 | 63.98 | temperature | 20.0 | 30 | > th | dose independent | rect. | 7 | 23 |
| 227 | 64.02 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 237 | 64.08 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 256 | 64.19 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 259 | 64.20 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 262 | 64.20 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 264 | 64.22 | wind | 3.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 271 | 64.25 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 289 | 64.30 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 294 | 64.33 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 13 | 3 |
| 302 | 64.37 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 310 | 64.39 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 22 | 8 |
| 333 | 64.46 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 12 |
| 334 | 64.46 | temperature | 20.0 | 10 | < th | dose independent | rect. | 12 | 19 |
| 335 | 64.46 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 22 |
| 339 | 64.47 | temperature | 20.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 351 | 64.51 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 355 | 64.51 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 22 |
| 376 | 64.55 | wind | 3.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 385 | 64.55 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 16 |
| 402 | 64.57 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 408 | 64.58 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 14 |
| 414 | 64.58 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 4 | 3 |
| 422 | 64.60 | temperature | 20.0 | 720 | > th | dose independent | sin | 8 | NA |
| 453 | 64.63 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 463 | 64.64 | wind | 7.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 471 | 64.66 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 19 |
| 480 | 64.67 | temperature | 30.0 | 270 | < th | dose independent | rect. | 23 | 20 |
| 506 | 64.70 | temperature | 20.0 | 10 | < th | dose independent | rect. | 19 | 15 |
| 510 | 64.70 | temperature | 20.0 | 10 | < th | dose independent | rect. | 12 | 22 |
| 512 | 64.70 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 514 | 64.70 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 515 | 64.71 | temperature | 20.0 | 10 | < th | dose independent | sin | 9 | NA |
| 526 | 64.71 | temperature | 20.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 533 | 64.72 | temperature | 20.0 | 30 | > th | dose independent | no | NA | NA |
| 535 | 64.72 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 541 | 64.72 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 17 |
| 546 | 64.73 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 563 | 64.75 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 572 | 64.75 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 10 |
| 577 | 64.76 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 581 | 64.76 | temperature | 20.0 | 10 | < th | dose independent | rect. | 5 | 23 |
| 582 | 64.76 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 583 | 64.76 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 588 | 64.77 | temperature | 20.0 | 10 | < th | dose independent | no | NA | NA |
| 596 | 64.77 | temperature | 20.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 597 | 64.77 | temperature | 20.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 602 | 64.78 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 610 | 64.78 | temperature | 20.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 613 | 64.78 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 23 |
| 615 | 64.78 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 636 | 64.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 637 | 64.80 | temperature | 20.0 | 30 | > th | dose independent | sin | 7 | NA |
| 663 | 64.81 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 5 |
| 671 | 64.81 | temperature | 20.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 681 | 64.82 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 694 | 64.82 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 702 | 64.83 | temperature | 25.0 | 720 | > th | dose independent | rect. | 14 | 10 |
| 705 | 64.83 | temperature | 20.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 726 | 64.85 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 17 | 13 |
| 730 | 64.85 | temperature | 20.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 732 | 64.85 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 2 | 5 |
| 737 | 64.85 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 20 |
| 755 | 64.87 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 757 | 64.87 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 760 | 64.87 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 778 | 64.88 | temperature | 20.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 794 | 64.89 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 795 | 64.89 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 826 | 64.90 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 23 |
| 853 | 64.91 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 19 | 4 |
| 863 | 64.92 | temperature | 25.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 888 | 64.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 905 | 64.94 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 908 | 64.94 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 6 | 5 |
| 918 | 64.95 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 3 | 3 |
| 932 | 64.96 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 953 | 64.97 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 963 | 64.97 | radiation | 30.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |