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Os03g0777500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1068 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.83 (0.0252) R2 : 0.817
β1 : -1.26 (0.0923) R2dD : 0.0763 R2D : 0.0125
β2 : 1.47 (0.0905) R2dC : 0.209 R2C : 0.5
β3 : -1.24 (0.0754) R2dE : 0.219 R2E : 0.476
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.619 (0.0538) R2dN8 : 0.0676 R2N8 : 0.0179
σ : 0.47
deviance : 101.73
__
_____
C
peak time of C : 20.1
E
wheather : temperature
threshold : 29.49
memory length : 166
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 5.02
open length of G : 7.68

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
97.53 0.464 9.83 -1.34 1.43 -1.17 2.03 1.8 -0.586 20.4 29.41 109 5.17 7.88
102.7 0.472 9.82 -1.3 1.4 -1.2 0.0623 -- -0.604 20.4 29.5 125 5.02 7.9
104.71 0.477 9.88 -1.41 1.54 -1.11 -- 1.31 -0.636 20.1 29.5 155 5.18 7.68
101.73 0.47 9.83 -1.26 1.47 -1.24 -- -- -0.619 20.1 29.49 166 5.02 7.68
141 0.553 9.69 -1.19 -- -1.84 -- 1 -0.493 -- 31.36 166 4.12 8.38
139.3 0.553 9.84 -1.15 2.53 -- -0.302 -- -0.528 21 -- -- -- --
139.62 0.553 9.84 -1.14 2.53 -- -- -- -0.528 21 -- -- -- --
124.87 0.52 9.76 -1.16 -- -2.28 -- -- -0.511 -- 101.1 351 1.55 9.4
142.03 0.555 9.81 -- 1.51 -1.18 -- -- -0.481 20.1 29.32 180 4.87 7.75
507.02 1.05 9.77 -1.13 -- -- -- -- -0.543 -- -- -- -- --
173.63 0.616 9.81 -- 2.53 -- -- -- -0.402 21 -- -- -- --
158.76 0.587 9.74 -- -- -2.39 -- -- -0.398 -- 109.4 381 1.52 8.9
540.82 1.09 9.75 -- -- -- -- -- -0.418 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 99.42 temperature 10.0 270 > th dose dependent rect. 24 16
5 101.99 temperature 30.0 270 < th dose dependent rect. 4 19
7 102.42 atmosphere 995.0 10 > th dose dependent rect. 6 21
9 102.83 temperature 30.0 90 < th dose independent rect. 5 8
16 103.58 temperature 30.0 90 < th dose independent rect. 5 20
21 103.86 atmosphere 1015.0 10 < th dose dependent rect. 12 18
31 104.65 atmosphere 995.0 10 > th dose dependent rect. 6 19
36 104.84 temperature 30.0 270 < th dose dependent rect. 4 7
37 104.85 temperature 15.0 270 > th dose independent rect. 24 15
40 105.05 wind 1.0 90 > th dose independent rect. 5 22
44 105.11 radiation 30.0 270 < th dose dependent rect. 5 19
50 105.24 radiation 1.0 90 < th dose independent rect. 1 6
59 105.49 radiation 1.0 90 < th dose independent sin 5 NA
64 105.51 radiation 1.0 90 > th dose independent sin 5 NA
68 105.61 humidity 70.0 270 > th dose independent rect. 4 20
73 105.74 atmosphere 1015.0 270 < th dose dependent rect. 1 2
77 105.93 temperature 20.0 90 > th dose independent rect. 1 5
78 105.94 radiation 1.0 90 < th dose dependent sin 4 NA
80 105.96 humidity 70.0 90 > th dose dependent rect. 1 4
82 105.97 temperature 10.0 270 > th dose dependent rect. 8 21
88 106.05 radiation 1.0 90 < th dose dependent rect. 1 5
98 106.29 atmosphere 995.0 270 > th dose independent rect. 3 22
104 106.41 atmosphere 995.0 270 > th dose independent rect. 4 20
107 106.43 humidity 50.0 270 > th dose dependent rect. 4 8
111 106.45 radiation 1.0 90 < th dose independent rect. 1 14
113 106.47 humidity 80.0 270 > th dose independent rect. 24 4
114 106.47 atmosphere 1000.0 90 > th dose independent rect. 5 22
117 106.50 temperature 20.0 270 > th dose independent rect. 1 1
125 106.60 humidity 80.0 10 > th dose independent rect. 1 5
135 106.68 humidity 50.0 270 > th dose dependent rect. 1 2
161 107.00 atmosphere 1000.0 10 > th dose independent rect. 6 21
164 107.04 atmosphere 1015.0 90 < th dose dependent rect. 1 4
166 107.07 temperature 30.0 10 < th dose independent rect. 6 7
174 107.11 atmosphere 1015.0 90 < th dose dependent rect. 3 2
175 107.12 humidity 80.0 270 > th dose independent rect. 1 2
178 107.13 radiation 1.0 90 > th dose independent rect. 4 8
199 107.27 precipitation 0.1 270 < th dose independent rect. 3 22
200 107.27 precipitation 0.1 270 < th dose dependent rect. 3 22
212 107.40 temperature 10.0 270 > th dose dependent rect. 24 4
213 107.41 temperature 10.0 270 > th dose independent rect. 1 2
215 107.41 temperature 30.0 270 < th dose independent rect. 1 2
216 107.41 humidity 50.0 270 > th dose independent rect. 1 2
219 107.41 atmosphere 995.0 270 > th dose independent rect. 1 2
220 107.41 atmosphere 1010.0 270 < th dose independent rect. 1 2
222 107.41 radiation 1.0 270 < th dose independent rect. 1 2
227 107.41 temperature 10.0 270 > th dose independent rect. 3 22
228 107.41 radiation 1.0 270 < th dose dependent rect. 1 2
233 107.45 precipitation 0.1 270 < th dose independent rect. 1 2
234 107.45 precipitation 0.1 270 < th dose dependent rect. 1 2
236 107.47 temperature 30.0 30 < th dose dependent rect. 6 6
237 107.48 wind 9.0 270 < th dose independent rect. 1 2
244 107.54 radiation 1.0 90 < th dose dependent rect. 1 14
249 107.57 atmosphere 1000.0 10 > th dose independent rect. 6 19
262 107.66 humidity 70.0 90 > th dose dependent rect. 3 2
268 107.74 temperature 10.0 270 > th dose dependent rect. 8 10
269 107.75 temperature 10.0 270 > th dose independent rect. 24 4
271 107.75 temperature 30.0 270 < th dose independent rect. 24 4
272 107.75 humidity 50.0 270 > th dose independent rect. 24 4
275 107.75 atmosphere 995.0 270 > th dose independent rect. 24 4
276 107.75 atmosphere 1010.0 270 < th dose independent rect. 24 4
284 107.75 temperature 10.0 270 > th dose independent rect. 4 20
293 107.79 wind 9.0 270 < th dose independent rect. 24 4
303 107.93 temperature 10.0 270 > th dose dependent rect. 1 2
319 108.08 temperature 10.0 30 > th dose dependent rect. 1 5
326 108.13 radiation 20.0 270 < th dose independent rect. 5 19
333 108.16 precipitation 0.1 270 < th dose independent rect. 4 20
337 108.16 precipitation 0.1 270 < th dose dependent rect. 4 20
339 108.17 radiation 1.0 90 < th dose dependent rect. 1 16
345 108.22 humidity 70.0 10 > th dose dependent rect. 3 3
356 108.27 radiation 40.0 270 < th dose independent rect. 4 20
362 108.31 precipitation 0.1 90 < th dose independent rect. 5 7
363 108.31 precipitation 0.1 90 < th dose dependent rect. 5 7
367 108.36 temperature 10.0 90 > th dose independent rect. 5 7
368 108.36 atmosphere 995.0 90 > th dose independent rect. 5 7
369 108.36 atmosphere 1015.0 90 < th dose independent rect. 5 7
370 108.36 temperature 10.0 90 > th dose independent rect. 12 17
374 108.39 wind 9.0 90 < th dose independent rect. 12 17
376 108.40 precipitation 0.1 270 < th dose independent rect. 24 4
382 108.40 precipitation 0.1 270 < th dose dependent rect. 24 4
385 108.43 temperature 20.0 270 > th dose independent rect. 23 6
399 108.51 temperature 20.0 90 > th dose independent rect. 3 2
417 108.56 temperature 10.0 10 > th dose dependent rect. 3 3
429 108.62 humidity 70.0 270 > th dose independent rect. 4 8
436 108.65 wind 9.0 90 < th dose independent rect. 3 2
437 108.65 temperature 10.0 90 > th dose independent rect. 3 2
439 108.65 temperature 30.0 90 < th dose independent rect. 3 2
440 108.65 humidity 50.0 90 > th dose independent rect. 3 2
443 108.65 atmosphere 995.0 90 > th dose independent rect. 3 2
444 108.65 atmosphere 1010.0 90 < th dose independent rect. 3 2
452 108.65 temperature 10.0 90 > th dose independent rect. 5 22
454 108.66 wind 1.0 90 > th dose independent rect. 5 7
464 108.70 humidity 50.0 90 > th dose independent rect. 5 7
466 108.70 temperature 10.0 90 > th dose dependent rect. 12 17
470 108.73 precipitation 0.1 90 < th dose independent rect. 5 22
471 108.73 precipitation 0.1 90 < th dose dependent rect. 5 22
478 108.77 humidity 80.0 10 > th dose independent rect. 3 3
481 108.79 wind 1.0 270 > th dose independent rect. 3 22
529 108.97 humidity 50.0 270 > th dose dependent rect. 5 18
531 108.99 wind 9.0 4320 < th dose independent rect. 2 5
568 109.14 precipitation 0.1 90 < th dose independent rect. 12 17
573 109.14 precipitation 0.1 90 < th dose dependent rect. 12 17
574 109.14 humidity 50.0 270 > th dose dependent rect. 4 20
593 109.18 temperature 10.0 10 > th dose dependent rect. 12 18
626 109.29 precipitation 0.1 90 < th dose independent rect. 3 2
627 109.29 precipitation 0.1 90 < th dose dependent rect. 3 2
651 109.40 wind 9.0 270 < th dose independent rect. 24 15
669 109.44 precipitation 0.1 10 < th dose independent rect. 6 6
676 109.44 precipitation 0.1 10 < th dose dependent rect. 6 6
679 109.45 wind 9.0 10 < th dose independent rect. 1 5
680 109.45 temperature 10.0 10 > th dose independent rect. 1 5
682 109.45 temperature 30.0 10 < th dose independent rect. 1 5
683 109.45 humidity 50.0 10 > th dose independent rect. 1 5
686 109.45 atmosphere 995.0 10 > th dose independent rect. 1 5
687 109.45 atmosphere 1010.0 10 < th dose independent rect. 1 5
689 109.45 radiation 20.0 10 < th dose independent rect. 1 5
692 109.45 temperature 10.0 10 > th dose independent rect. 6 6
694 109.45 atmosphere 995.0 10 > th dose independent rect. 6 6
695 109.45 atmosphere 1015.0 10 < th dose independent rect. 6 6
696 109.45 temperature 10.0 10 > th dose independent rect. 12 18
697 109.45 temperature 10.0 10 > th dose independent rect. 6 19
710 109.50 wind 9.0 10 < th dose independent rect. 12 18
711 109.50 atmosphere 1015.0 10 < th dose dependent rect. 1 5
735 109.55 wind 9.0 10 < th dose independent rect. 3 3
736 109.55 temperature 10.0 10 > th dose independent rect. 3 3
738 109.55 temperature 30.0 10 < th dose independent rect. 3 3
739 109.55 humidity 50.0 10 > th dose independent rect. 3 3
742 109.55 atmosphere 995.0 10 > th dose independent rect. 3 3
743 109.55 atmosphere 1010.0 10 < th dose independent rect. 3 3
745 109.55 radiation 20.0 10 < th dose independent rect. 3 3
749 109.55 temperature 10.0 10 > th dose independent rect. 6 21
764 109.56 humidity 50.0 90 > th dose independent rect. 5 22
786 109.62 temperature 10.0 1440 > th dose independent rect. 2 5
789 109.62 temperature 30.0 1440 < th dose independent rect. 2 5
793 109.62 humidity 50.0 1440 > th dose independent rect. 2 5
798 109.62 atmosphere 995.0 1440 > th dose independent rect. 2 5
799 109.62 radiation 40.0 1440 < th dose independent rect. 2 5
803 109.62 temperature 10.0 1440 > th dose independent rect. 7 19
813 109.65 precipitation 0.1 10 < th dose independent rect. 6 21
814 109.65 precipitation 0.1 10 < th dose dependent rect. 6 21
869 109.72 precipitation 0.1 10 < th dose independent rect. 6 19
872 109.72 precipitation 0.1 10 < th dose dependent rect. 6 19
898 109.85 radiation 40.0 270 < th dose dependent rect. 5 6
974 110.00 wind 9.0 270 < th dose independent rect. 4 20