Os03g0775500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF59 domain containing protein.
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Os03g0775500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF59 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 41.28 | 0.302 | 13.1 | -0.534 | 0.692 | -0.631 | 0.907 | -0.254 | -0.0132 | 1.71 | 79.88 | 1210 | -- | -- |
| 41.3 | 0.299 | 13.1 | -0.509 | 0.695 | -0.657 | 0.882 | -- | -0.0179 | 1.6 | 79.4 | 1161 | -- | -- |
| 43.94 | 0.309 | 13.1 | -0.515 | 0.724 | -0.672 | -- | 0.519 | -0.0165 | 1.75 | 79.81 | 1102 | -- | -- |
| 44.06 | 0.309 | 13.1 | -0.544 | 0.7 | -0.629 | -- | -- | -0.0212 | 2.06 | 79.04 | 1199 | -- | -- |
| 53.79 | 0.343 | 13.1 | -0.642 | -- | -0.794 | -- | -0.636 | 0.0225 | -- | 93 | 20 | -- | -- |
| 50.65 | 0.334 | 13.1 | -0.628 | 0.576 | -- | 0.737 | -- | 0.0144 | 1.91 | -- | -- | -- | -- |
| 52.52 | 0.339 | 13.1 | -0.652 | 0.585 | -- | -- | -- | 0.0092 | 2.33 | -- | -- | -- | -- |
| 54.54 | 0.345 | 13.1 | -0.634 | -- | -0.817 | -- | -- | 0.0235 | -- | 93 | 21 | -- | -- |
| 51.57 | 0.334 | 13.1 | -- | 0.701 | -0.725 | -- | -- | 0.0275 | 2.01 | 77.18 | 1200 | -- | -- |
| 72.79 | 0.399 | 13.1 | -0.627 | -- | -- | -- | -- | 0.0235 | -- | -- | -- | -- | -- |
| 63.72 | 0.373 | 13 | -- | 0.572 | -- | -- | -- | 0.0818 | 2.31 | -- | -- | -- | -- |
| 65.13 | 0.377 | 13 | -- | -- | -0.812 | -- | -- | 0.0938 | -- | 93 | 21 | -- | -- |
| 83.17 | 0.426 | 13 | -- | -- | -- | -- | -- | 0.0931 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.00 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 20 |
| 2 | 40.05 | temperature | 20 | 270 | > th | dose independent | rect. | 19 | 19 |
| 18 | 40.75 | humidity | 80 | 1440 | < th | dose dependent | sin | 7 | NA |
| 21 | 40.82 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 22 | 40.84 | humidity | 80 | 1440 | < th | dose dependent | rect. | 23 | 14 |
| 27 | 40.87 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 34 | 40.91 | humidity | 80 | 1440 | < th | dose dependent | rect. | 5 | 8 |
| 69 | 41.08 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 75 | 41.12 | humidity | 70 | 720 | > th | dose independent | rect. | 10 | 19 |
| 109 | 41.24 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 121 | 41.27 | humidity | 70 | 1440 | > th | dose independent | rect. | 21 | 17 |
| 125 | 41.28 | humidity | 70 | 1440 | > th | dose independent | rect. | 3 | 11 |
| 154 | 41.35 | humidity | 70 | 720 | > th | dose independent | sin | 17 | NA |
| 164 | 41.36 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 175 | 41.39 | humidity | 70 | 720 | > th | dose independent | rect. | 13 | 16 |
| 191 | 41.43 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 195 | 41.44 | humidity | 50 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 228 | 41.53 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 234 | 41.54 | humidity | 50 | 720 | > th | dose dependent | rect. | 15 | 6 |
| 237 | 41.55 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 250 | 41.57 | radiation | 10 | 10 | < th | dose dependent | rect. | 20 | 20 |
| 251 | 41.58 | humidity | 70 | 1440 | > th | dose independent | sin | 6 | NA |
| 267 | 41.59 | radiation | 10 | 90 | < th | dose dependent | rect. | 19 | 22 |
| 271 | 41.60 | humidity | 70 | 1440 | < th | dose independent | rect. | 19 | 18 |
| 297 | 41.64 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 302 | 41.65 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 4 |
| 307 | 41.66 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 320 | 41.67 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 21 |
| 332 | 41.68 | humidity | 50 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 333 | 41.68 | radiation | 10 | 10 | < th | dose dependent | rect. | 20 | 18 |
| 398 | 41.75 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 18 |
| 399 | 41.76 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 6 |
| 421 | 41.78 | humidity | 70 | 720 | > th | dose independent | rect. | 15 | 20 |
| 422 | 41.78 | wind | 7 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 430 | 41.79 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 17 |
| 468 | 41.84 | humidity | 70 | 1440 | < th | dose independent | sin | 7 | NA |
| 483 | 41.85 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 9 |
| 486 | 41.85 | temperature | 20 | 10 | > th | dose independent | rect. | 23 | 15 |
| 519 | 41.89 | wind | 5 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 542 | 41.92 | humidity | 50 | 1440 | > th | dose dependent | sin | 2 | NA |
| 559 | 41.94 | humidity | 70 | 720 | > th | dose independent | sin | 11 | NA |
| 560 | 41.94 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 580 | 41.96 | humidity | 50 | 720 | > th | dose dependent | sin | 17 | NA |
| 624 | 42.00 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 20 |
| 640 | 42.02 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 4 |
| 646 | 42.02 | humidity | 80 | 720 | > th | dose independent | rect. | 24 | 22 |
| 724 | 42.09 | humidity | 80 | 720 | < th | dose independent | rect. | 6 | 16 |
| 737 | 42.09 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 753 | 42.11 | humidity | 50 | 720 | > th | dose dependent | rect. | 9 | 13 |
| 776 | 42.13 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 786 | 42.13 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 22 |
| 787 | 42.13 | humidity | 80 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 802 | 42.14 | humidity | 50 | 720 | > th | dose dependent | rect. | 10 | 19 |
| 808 | 42.14 | humidity | 80 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 835 | 42.16 | radiation | 1 | 90 | < th | dose independent | rect. | 19 | 22 |
| 891 | 42.18 | humidity | 50 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 900 | 42.19 | wind | 9 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 959 | 42.23 | humidity | 80 | 720 | > th | dose independent | rect. | 8 | 14 |