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Os03g0769600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : ResB-like family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.9 (0.0196) R2 : 0.884
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.28 (0.0567) R2dC : 1.04 R2C : 0.632
β3 : -1.31 (0.0481) R2dE : 0.23 R2E : -0.183
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.26 (0.0416) R2dN8 : 0.013 R2N8 : 0.0188
σ : 0.369
deviance : 62.64
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C
peak time of C : 18.3
E
wheather : temperature
threshold : 19.4
memory length : 193
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 3.87
open length of G : 17.9

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
60.88 0.367 12.9 0.21 3.26 -1.21 -0.393 0.559 -0.226 18.4 19.44 182 3.98 18.2
62.12 0.367 12.9 0.173 3.29 -1.24 -0.157 -- -0.228 18.4 19.44 185 3.95 18.1
60.9 0.363 12.9 0.215 3.26 -1.28 -- 0.424 -0.221 18.3 19.49 190 3.85 17.9
61.84 0.366 12.9 0.178 3.28 -1.3 -- -- -0.235 18.3 19.36 189 3.88 17.9
280.88 0.785 12.9 0.0494 -- -1.52 -- 0.491 -0.339 -- 18.04 1770 0.0166 16.7
102.98 0.476 13 -0.0784 2.8 -- -0.747 -- -0.407 19.6 -- -- -- --
104.56 0.479 13 -0.0598 2.8 -- -- -- -0.408 19.6 -- -- -- --
281.27 0.785 12.9 0.0567 -- -1.53 -- -- -0.337 -- 18.5 1722 0.167 16.7
62.64 0.369 12.9 -- 3.28 -1.31 -- -- -0.26 18.3 19.4 193 3.87 17.9
526.08 1.07 12.9 -0.0989 -- -- -- -- -0.45 -- -- -- -- --
104.65 0.479 13 -- 2.8 -- -- -- -0.401 19.6 -- -- -- --
87.6 0.436 12.9 -- -- -2.76 -- -- -0.31 -- -22 508 0.168 6.85
526.34 1.07 12.9 -- -- -- -- -- -0.439 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 64.89 temperature 20.0 90 > th dose independent rect. 5 18
4 68.18 temperature 10.0 270 > th dose dependent rect. 17 15
27 72.54 temperature 30.0 90 < th dose dependent rect. 23 6
28 72.66 temperature 20.0 270 > th dose independent rect. 3 7
36 73.30 radiation 1.0 90 < th dose dependent rect. 23 16
37 73.31 temperature 20.0 270 > th dose independent rect. 16 16
40 73.45 radiation 1.0 90 < th dose dependent rect. 23 14
51 73.57 radiation 1.0 90 < th dose dependent rect. 23 12
55 73.66 radiation 1.0 90 < th dose independent rect. 22 17
58 73.67 radiation 1.0 90 < th dose dependent rect. 23 9
83 74.05 radiation 1.0 90 < th dose independent rect. 22 10
104 74.74 temperature 30.0 270 < th dose dependent rect. 21 7
107 74.93 temperature 20.0 90 > th dose independent rect. 19 16
118 75.41 temperature 30.0 10 < th dose dependent rect. 22 8
126 75.61 temperature 10.0 90 > th dose dependent rect. 5 18
139 75.96 temperature 30.0 10 < th dose dependent sin 7 NA
146 76.12 atmosphere 1015.0 270 < th dose independent rect. 4 17
157 76.32 wind 7.0 270 < th dose independent rect. 21 7
164 76.45 temperature 20.0 90 > th dose independent rect. 19 14
171 76.60 temperature 10.0 270 > th dose dependent rect. 3 6
177 76.76 wind 1.0 90 > th dose independent rect. 23 6
178 76.77 temperature 10.0 270 > th dose independent rect. 21 7
179 76.77 temperature 30.0 270 < th dose independent rect. 21 7
180 76.77 humidity 50.0 270 > th dose independent rect. 21 7
183 76.77 atmosphere 995.0 270 > th dose independent rect. 21 7
205 76.99 humidity 50.0 14400 > th dose independent rect. 18 6
218 77.13 temperature 10.0 10 > th dose dependent rect. 5 18
220 77.15 precipitation 0.1 270 < th dose independent rect. 21 7
221 77.15 precipitation 0.1 270 < th dose dependent rect. 21 7
225 77.22 wind 1.0 270 > th dose independent rect. 8 9
251 77.28 radiation 10.0 10 < th dose dependent rect. 23 7
252 77.34 atmosphere 995.0 270 > th dose dependent rect. 22 5
263 77.49 temperature 10.0 270 > th dose independent rect. 8 9
264 77.49 atmosphere 1015.0 270 < th dose independent rect. 8 9
271 77.53 wind 9.0 270 < th dose independent rect. 8 9
277 77.58 radiation 1.0 90 < th dose dependent sin 8 NA
281 77.61 radiation 20.0 270 < th dose independent rect. 17 15
289 77.71 temperature 15.0 270 > th dose independent rect. 15 7
290 77.72 wind 9.0 270 < th dose independent rect. 4 17
295 77.76 precipitation 0.1 270 < th dose independent rect. 8 9
296 77.76 precipitation 0.1 270 < th dose dependent rect. 8 9
297 77.77 temperature 10.0 270 > th dose dependent rect. 2 8
312 77.87 precipitation 0.1 270 < th dose independent rect. 4 17
314 77.87 precipitation 0.1 270 < th dose dependent rect. 4 17
321 77.90 wind 9.0 270 < th dose independent rect. 17 15
332 77.97 atmosphere 995.0 270 > th dose independent rect. 17 15
342 78.06 radiation 40.0 270 < th dose independent rect. 17 15
348 78.08 temperature 15.0 270 > th dose dependent rect. 4 3
406 78.26 temperature 10.0 43200 > th dose independent rect. 11 9
416 78.32 radiation 1.0 90 < th dose independent sin 8 NA
417 78.32 temperature 10.0 43200 > th dose independent rect. 9 9
418 78.32 humidity 50.0 270 > th dose independent rect. 17 15
425 78.35 atmosphere 1010.0 270 < th dose independent rect. 15 7
504 78.70 wind 1.0 270 > th dose independent rect. 21 7
507 78.71 wind 1.0 270 > th dose independent rect. 22 17
541 78.88 temperature 25.0 10 < th dose dependent rect. 22 18
542 78.89 radiation 1.0 90 > th dose independent sin 8 NA
544 78.91 atmosphere 995.0 270 > th dose independent rect. 4 17
553 78.96 atmosphere 995.0 270 > th dose dependent rect. 21 7
558 78.97 precipitation 0.1 270 < th dose independent rect. 17 15
561 78.97 precipitation 0.1 270 < th dose dependent rect. 17 15
583 79.04 temperature 15.0 10 > th dose dependent sin 8 NA
600 79.13 temperature 20.0 30 > th dose independent sin 5 NA
617 79.22 temperature 20.0 30 < th dose independent sin 5 NA
623 79.26 temperature 20.0 90 < th dose independent rect. 23 16
639 79.35 wind 9.0 270 < th dose dependent rect. 3 7
681 79.46 wind 9.0 270 < th dose independent rect. 22 17
687 79.47 radiation 40.0 270 < th dose independent rect. 15 7
688 79.47 temperature 10.0 270 > th dose independent rect. 22 17
708 79.53 radiation 40.0 270 < th dose dependent rect. 17 15
727 79.62 atmosphere 995.0 270 > th dose independent rect. 22 17
733 79.67 temperature 15.0 10 > th dose dependent rect. 5 7
750 79.73 humidity 50.0 90 > th dose dependent rect. 22 7
769 79.80 temperature 30.0 270 < th dose independent rect. 3 7
771 79.81 temperature 15.0 4320 > th dose independent rect. 7 3
774 79.82 temperature 20.0 90 < th dose independent rect. 23 18
777 79.83 wind 1.0 270 > th dose independent rect. 15 7
779 79.83 wind 9.0 270 < th dose dependent rect. 21 6
819 79.99 temperature 20.0 90 < th dose independent rect. 23 13
824 80.01 atmosphere 995.0 270 > th dose independent rect. 8 9
865 80.15 wind 9.0 10 < th dose independent rect. 6 17
870 80.17 wind 9.0 270 < th dose independent rect. 15 7
882 80.23 wind 7.0 10 < th dose independent rect. 23 7
883 80.24 temperature 10.0 270 > th dose dependent rect. 16 6
887 80.26 precipitation 0.1 270 < th dose independent rect. 22 17
889 80.26 precipitation 0.1 270 < th dose dependent rect. 22 17
895 80.28 temperature 25.0 10 < th dose dependent rect. 23 13
920 80.38 humidity 50.0 14400 > th dose independent rect. 7 2
922 80.38 temperature 10.0 10 > th dose independent rect. 23 7
923 80.38 temperature 30.0 10 < th dose independent rect. 23 7
924 80.38 humidity 50.0 10 > th dose independent rect. 23 7
927 80.38 atmosphere 995.0 10 > th dose independent rect. 23 7
928 80.38 radiation 20.0 10 < th dose independent rect. 23 7
931 80.38 temperature 10.0 10 > th dose independent rect. 6 17
933 80.38 atmosphere 1015.0 10 < th dose independent rect. 6 17
945 80.40 atmosphere 995.0 10 > th dose dependent rect. 23 7
955 80.43 precipitation 0.1 10 < th dose independent rect. 6 17
956 80.43 precipitation 0.1 10 < th dose dependent rect. 6 17
967 80.47 temperature 20.0 90 < th dose independent rect. 23 20
988 80.54 temperature 25.0 90 < th dose dependent rect. 23 12