Os03g0764100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger transcription factor ZF1.
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Os03g0764100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger transcription factor ZF1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.38 | 0.468 | 12.8 | 0.348 | 0.646 | 0.796 | 0.13 | -0.391 | -0.00896 | 5.68 | 11.13 | 224 | -- | -- |
| 99.9 | 0.466 | 12.8 | 0.346 | 0.654 | 0.796 | 0.0171 | -- | -0.0107 | 5.81 | 9.006 | 214 | -- | -- |
| 99.36 | 0.464 | 12.8 | 0.337 | 0.649 | 0.813 | -- | -0.344 | -0.0138 | 5.91 | 10.17 | 214 | -- | -- |
| 99.88 | 0.465 | 12.8 | 0.343 | 0.638 | 0.821 | -- | -- | -0.0129 | 6.03 | 8.85 | 214 | -- | -- |
| 100.22 | 0.466 | 12.8 | 0.34 | -- | 1.34 | -- | -0.431 | 0.0324 | -- | 8.192 | 462 | -- | -- |
| 106.03 | 0.483 | 12.8 | 0.322 | 1.32 | -- | -0.235 | -- | -0.0412 | 3.38 | -- | -- | -- | -- |
| 106.2 | 0.483 | 12.8 | 0.327 | 1.32 | -- | -- | -- | -0.0398 | 3.39 | -- | -- | -- | -- |
| 100.76 | 0.468 | 12.8 | 0.334 | -- | 1.34 | -- | -- | 0.0303 | -- | 8.29 | 465 | -- | -- |
| 102.95 | 0.473 | 12.8 | -- | 0.663 | 0.783 | -- | -- | -0.0532 | 5.75 | 9.716 | 214 | -- | -- |
| 204.02 | 0.667 | 12.8 | 0.382 | -- | -- | -- | -- | -0.00498 | -- | -- | -- | -- | -- |
| 109.01 | 0.488 | 12.8 | -- | 1.33 | -- | -- | -- | -0.0762 | 3.39 | -- | -- | -- | -- |
| 103.57 | 0.474 | 12.8 | -- | -- | 1.36 | -- | -- | -0.00436 | -- | 9.496 | 461 | -- | -- |
| 207.88 | 0.673 | 12.8 | -- | -- | -- | -- | -- | -0.0474 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 93.13 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 9 | 11 |
| 3 | 93.41 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 20 |
| 4 | 93.70 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 13 | 7 |
| 7 | 93.79 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 9 | 20 |
| 8 | 93.81 | temperature | 25.0 | 30 | > th | dose independent | rect. | 13 | 5 |
| 14 | 94.02 | radiation | 1.0 | 10 | > th | dose independent | rect. | 13 | 5 |
| 18 | 94.16 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 15 |
| 22 | 94.27 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 6 |
| 26 | 94.35 | radiation | 1.0 | 270 | < th | dose independent | rect. | 7 | 13 |
| 29 | 94.43 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 15 |
| 30 | 94.44 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 13 | 4 |
| 45 | 94.51 | radiation | 10.0 | 720 | < th | dose independent | rect. | 11 | 9 |
| 50 | 94.68 | temperature | 25.0 | 90 | < th | dose independent | rect. | 17 | 4 |
| 54 | 94.69 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 13 | 2 |
| 76 | 94.82 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 4 |
| 78 | 94.83 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 84 | 94.88 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 17 | 3 |
| 95 | 94.96 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 13 | 4 |
| 100 | 95.04 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 18 | 19 |
| 101 | 95.05 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 1 |
| 102 | 95.05 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 13 | 5 |
| 105 | 95.07 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 13 |
| 109 | 95.10 | wind | 1.0 | 90 | > th | dose dependent | rect. | 17 | 20 |
| 115 | 95.13 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 17 | 20 |
| 120 | 95.18 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 3 |
| 125 | 95.21 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 6 |
| 129 | 95.25 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 6 |
| 131 | 95.26 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 4 |
| 155 | 95.38 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 16 | 11 |
| 158 | 95.40 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 15 | 14 |
| 160 | 95.42 | humidity | 80.0 | 270 | < th | dose independent | rect. | 13 | 1 |
| 166 | 95.45 | radiation | 10.0 | 90 | > th | dose independent | sin | 14 | NA |
| 174 | 95.48 | humidity | 90.0 | 10 | < th | dose independent | rect. | 13 | 5 |
| 189 | 95.54 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 1 |
| 191 | 95.56 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 4 |
| 195 | 95.56 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 203 | 95.62 | temperature | 30.0 | 30 | < th | dose independent | rect. | 13 | 4 |
| 205 | 95.62 | humidity | 50.0 | 90 | > th | dose independent | rect. | 17 | 20 |
| 207 | 95.63 | radiation | 10.0 | 720 | > th | dose independent | rect. | 12 | 6 |
| 226 | 95.68 | radiation | 10.0 | 270 | > th | dose independent | rect. | 11 | 21 |
| 247 | 95.79 | humidity | 90.0 | 90 | < th | dose independent | rect. | 13 | 4 |
| 256 | 95.82 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 14 |
| 259 | 95.83 | radiation | 10.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 265 | 95.85 | humidity | 70.0 | 90 | > th | dose independent | rect. | 17 | 6 |
| 268 | 95.87 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 23 |
| 269 | 95.87 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 272 | 95.89 | radiation | 10.0 | 90 | > th | dose independent | rect. | 13 | 18 |
| 276 | 95.91 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 279 | 95.92 | wind | 7.0 | 90 | < th | dose independent | rect. | 13 | 4 |
| 305 | 96.00 | wind | 1.0 | 90 | > th | dose independent | rect. | 13 | 4 |
| 309 | 96.00 | wind | 1.0 | 10 | > th | dose dependent | rect. | 18 | 19 |
| 318 | 96.04 | radiation | 10.0 | 720 | < th | dose independent | sin | 16 | NA |
| 328 | 96.07 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 18 | 2 |
| 331 | 96.08 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 13 | 4 |
| 332 | 96.08 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 13 | 4 |
| 334 | 96.09 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 1 |
| 347 | 96.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 1 |
| 350 | 96.12 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 1 |
| 352 | 96.12 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 1 |
| 353 | 96.12 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 23 |
| 354 | 96.12 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 1 |
| 373 | 96.19 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 20 |
| 380 | 96.23 | radiation | 10.0 | 90 | < th | dose dependent | sin | 16 | NA |
| 383 | 96.24 | wind | 7.0 | 270 | < th | dose independent | rect. | 20 | 22 |
| 385 | 96.25 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 390 | 96.29 | temperature | 10.0 | 90 | > th | dose independent | rect. | 13 | 4 |
| 392 | 96.29 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 13 | 4 |
| 395 | 96.29 | temperature | 10.0 | 90 | > th | dose independent | rect. | 17 | 20 |
| 396 | 96.29 | radiation | 1.0 | 90 | > th | dose dependent | sin | 13 | NA |
| 402 | 96.32 | radiation | 10.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 407 | 96.34 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 13 | 5 |
| 418 | 96.40 | radiation | 40.0 | 270 | > th | dose independent | rect. | 13 | 1 |
| 419 | 96.40 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 18 | 2 |
| 427 | 96.41 | temperature | 15.0 | 90 | > th | dose independent | rect. | 23 | 18 |
| 430 | 96.41 | radiation | 10.0 | 270 | < th | dose dependent | sin | 21 | NA |
| 431 | 96.41 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 439 | 96.46 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 11 | 10 |
| 442 | 96.47 | wind | 7.0 | 10 | < th | dose independent | rect. | 13 | 5 |
| 475 | 96.52 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 1 |
| 476 | 96.52 | temperature | 25.0 | 30 | > th | dose independent | rect. | 13 | 9 |
| 481 | 96.53 | radiation | 1.0 | 10 | > th | dose independent | sin | 16 | NA |
| 489 | 96.56 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 13 |
| 520 | 96.66 | temperature | 25.0 | 90 | > th | dose independent | rect. | 13 | 12 |
| 532 | 96.68 | wind | 9.0 | 270 | < th | dose dependent | rect. | 13 | 1 |
| 567 | 96.75 | humidity | 50.0 | 10 | > th | dose independent | rect. | 13 | 5 |
| 597 | 96.81 | temperature | 25.0 | 90 | < th | dose independent | rect. | 11 | 10 |
| 610 | 96.83 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 10 | 13 |
| 627 | 96.86 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 12 | 21 |
| 630 | 96.87 | temperature | 25.0 | 90 | < th | dose independent | rect. | 11 | 12 |
| 633 | 96.88 | radiation | 10.0 | 720 | > th | dose independent | sin | 17 | NA |
| 669 | 96.90 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 671 | 96.91 | radiation | 10.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 677 | 96.92 | radiation | 1.0 | 90 | > th | dose independent | sin | 18 | NA |
| 691 | 96.94 | humidity | 70.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 702 | 96.95 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 23 | 18 |
| 709 | 96.97 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 13 | 5 |
| 714 | 96.97 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 13 | 5 |
| 716 | 96.98 | temperature | 30.0 | 10 | < th | dose independent | rect. | 16 | 1 |
| 736 | 97.00 | humidity | 50.0 | 10 | > th | dose independent | rect. | 18 | 19 |
| 745 | 97.02 | wind | 9.0 | 720 | < th | dose independent | rect. | 3 | 14 |
| 773 | 97.08 | radiation | 1.0 | 90 | < th | dose independent | sin | 18 | NA |
| 779 | 97.09 | wind | 3.0 | 90 | > th | dose independent | rect. | 17 | 20 |
| 780 | 97.09 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 17 | 20 |
| 786 | 97.09 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 17 | 20 |
| 790 | 97.10 | wind | 7.0 | 90 | < th | dose independent | rect. | 23 | 18 |
| 795 | 97.11 | radiation | 1.0 | 270 | < th | dose independent | sin | 22 | NA |
| 804 | 97.12 | temperature | 10.0 | 10 | > th | dose independent | rect. | 13 | 5 |
| 806 | 97.12 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 13 | 5 |
| 808 | 97.12 | temperature | 10.0 | 10 | > th | dose independent | rect. | 18 | 19 |
| 813 | 97.13 | wind | 7.0 | 720 | < th | dose independent | rect. | 13 | 4 |
| 844 | 97.18 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 852 | 97.19 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 17 | 20 |
| 857 | 97.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 13 |
| 858 | 97.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 13 |
| 859 | 97.21 | radiation | 1.0 | 270 | > th | dose independent | sin | 22 | NA |
| 870 | 97.21 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 18 | 19 |
| 873 | 97.22 | wind | 9.0 | 90 | < th | dose independent | rect. | 17 | 20 |
| 921 | 97.27 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 13 | 1 |
| 969 | 97.33 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 13 | 15 |
| 976 | 97.34 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 17 | 20 |
| 981 | 97.34 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 17 | 20 |
| 986 | 97.36 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 16 | 1 |