BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0764100 Os03g0764100|AK072942
(269 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27730.1 | chr1:9648302-9648985 REVERSE LENGTH=228 109 1e-24
AT3G19580.1 | chr3:6803293-6804114 REVERSE LENGTH=274 107 5e-24
AT5G67450.1 | chr5:26919142-26919879 REVERSE LENGTH=246 103 7e-23
AT5G04340.1 | chr5:1216321-1217037 REVERSE LENGTH=239 102 3e-22
AT3G49930.1 | chr3:18510246-18510893 FORWARD LENGTH=216 94 1e-19
AT5G43170.1 | chr5:17331050-17331631 REVERSE LENGTH=194 93 1e-19
AT2G28200.1 | chr2:12024321-12025181 FORWARD LENGTH=287 80 1e-15
AT1G49900.1 | chr1:18474108-18477643 REVERSE LENGTH=918 80 1e-15
AT5G61470.1 | chr5:24722870-24723784 FORWARD LENGTH=305 65 5e-11
AT3G46080.1 | chr3:16922753-16923247 REVERSE LENGTH=165 64 7e-11
AT3G46070.1 | chr3:16920445-16920957 REVERSE LENGTH=171 64 1e-10
AT5G56200.1 | chr5:22747768-22749249 FORWARD LENGTH=494 63 2e-10
AT2G17180.1 | chr2:7476835-7477647 REVERSE LENGTH=271 62 2e-10
AT5G03510.1 | chr5:880353-881231 FORWARD LENGTH=293 62 3e-10
AT1G02030.1 | chr1:355385-356188 REVERSE LENGTH=268 60 1e-09
AT3G10470.1 | chr3:3260424-3261620 FORWARD LENGTH=399 60 1e-09
AT4G35280.1 | chr4:16787429-16788283 REVERSE LENGTH=285 57 8e-09
AT1G02040.1 | chr1:358104-359078 REVERSE LENGTH=325 56 2e-08
>AT1G27730.1 | chr1:9648302-9648985 REVERSE LENGTH=228
Length = 227
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 97/203 (47%), Gaps = 38/203 (18%)
Query: 64 LALCLLMLARGGHHRVQXXXXXXXXXXXXXXXEFKCSVCGKSFSSYQALGGHKTSHRVKX 123
LA CL++LAR +KCSVC K+FSSYQALGGHK SHR
Sbjct: 55 LAFCLMLLARDNRQ--------PPPPPAVEKLSYKCSVCDKTFSSYQALGGHKASHR--- 103
Query: 124 XXXXXXXXXXXXXXXXXXXXXEDREPATSSTAASSDGMTNRVHRCSICQKEFPTGQALGG 183
+D ++++T ++ + + H C+IC K FP+GQALGG
Sbjct: 104 ----------KNLSQTLSGGGDDHSTSSATTTSAVTTGSGKSHVCTICNKSFPSGQALGG 153
Query: 184 HKRKHYDXXXXXXXXXSSTELLATVAAESEVGSSGNGQSATRAFDLNLPAVPEFVWRPCS 243
HKR HY+ ++V+ GS+ + S+ R FDLN+P +PEF
Sbjct: 154 HKRCHYEGNNNINT--------SSVSNSEGAGSTSHVSSSHRGFDLNIPPIPEF------ 199
Query: 244 KGKKMWDEEEEVQSPLAFKKPRL 266
M + ++EV SP+ KKPR
Sbjct: 200 ---SMVNGDDEVMSPMPAKKPRF 219
>AT3G19580.1 | chr3:6803293-6804114 REVERSE LENGTH=274
Length = 273
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 64 LALCLLMLARG--GHHRVQXXXXXXXXXXXXXXXEFKCSVCGKSFSSYQALGGHKTSHRV 121
LALCLLMLA+ R +KC+VC K+F SYQALGGHK SHR+
Sbjct: 71 LALCLLMLAKDQPSQTRFHQQSQSLTPPPESKNLPYKCNVCEKAFPSYQALGGHKASHRI 130
Query: 122 KXXXXXXXXXXXXXXXXXXXXXXEDREPATSSTAASSD---GMTNRVHRCSICQKEFPTG 178
K +D T S A + ++H CSIC K FPTG
Sbjct: 131 KPPTVISTTA-------------DDSTAPTISIVAGEKHPIAASGKIHECSICHKVFPTG 177
Query: 179 QALGGHKRKHYDXXXXXXXXXSSTELLATVAAESEVGSSGNGQSATRAF-DLNLPAVPEF 237
QALGGHKR HY+ S + + + S V + + R F DLNLPA+PE
Sbjct: 178 QALGGHKRCHYEGNLGGGGGGGSKSISHSGSVSSTVSE----ERSHRGFIDLNLPALPEL 233
Query: 238 VWRPCSKGKKMWDEEEEVQSPLAFKKPRLLT 268
+ D EE+ SPL KKP LLT
Sbjct: 234 SLH----HNPIVD--EEILSPLTGKKPLLLT 258
>AT5G67450.1 | chr5:26919142-26919879 REVERSE LENGTH=246
Length = 245
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 85/178 (47%), Gaps = 12/178 (6%)
Query: 64 LALCLLMLARGGHHRVQXXXXXXXXXXXXXXXEFKCSVCGKSFSSYQALGGHKTSHRVKX 123
LALCLLMLARG + ++KC+VCGKSFSSYQALGGHKTSHR
Sbjct: 64 LALCLLMLARGSAVQSPPLPPLPSRASPSDHRDYKCTVCGKSFSSYQALGGHKTSHR--- 120
Query: 124 XXXXXXXXXXXXXXXXXXXXXEDREPATSSTAASSDGMTN--RVHRCSICQKEFPTGQAL 181
+ T + +G++ ++H CSIC K F +GQAL
Sbjct: 121 -KPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSICFKSFASGQAL 179
Query: 182 GGHKRKHYDXXXXXXXXXSSTELLATVA------AESEVGSSGNGQSATRAFDLNLPA 233
GGHKR HYD SS+ + VA ++E S + R FDLNLPA
Sbjct: 180 GGHKRCHYDGGNNGNGNGSSSNSVELVAGSDVSDVDNERWSEESAIGGHRGFDLNLPA 237
>AT5G04340.1 | chr5:1216321-1217037 REVERSE LENGTH=239
Length = 238
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 97/212 (45%), Gaps = 40/212 (18%)
Query: 64 LALCLLMLARGGHHRVQXXXXXXXXXXXXXXXE----FKCSVCGKSFSSYQALGGHKTSH 119
+ALCL++LAR G +KCSVC K+FSSYQALGGHK SH
Sbjct: 52 IALCLMLLARDGDRNRDLDLPSSSSSPPLLPPLPTPIYKCSVCDKAFSSYQALGGHKASH 111
Query: 120 RVKXXXXXXXXXXXXXXXXXXXXXXEDREPATSSTAASSDGMTN-----RVHRCSICQKE 174
R E +TSS +S + H CSIC K
Sbjct: 112 RKSFSLTQSAGGD---------------ELSTSSAITTSGISGGGGGSVKSHVCSICHKS 156
Query: 175 FPTGQALGGHKRKHYDXXXXXXXXXSSTELLATVAAESEVGSSGNGQSATRAFDLNLPAV 234
F TGQALGGHKR HY+ + + ++V+ +VGS+ + S R FDLN+P +
Sbjct: 157 FATGQALGGHKRCHYE-------GKNGGGVSSSVSNSEDVGSTSHVSSGHRGFDLNIPPI 209
Query: 235 PEFVWRPCSKGKKMWDEEEEVQSPLAFKKPRL 266
PEF M + +EEV SP+ KK R
Sbjct: 210 PEF---------SMVNGDEEVMSPMPAKKLRF 232
>AT3G49930.1 | chr3:18510246-18510893 FORWARD LENGTH=216
Length = 215
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 65/130 (50%), Gaps = 21/130 (16%)
Query: 64 LALCLLMLARGG-HHRVQXXXXXXXXXXXXXXXEFKCSVCGKSFSSYQALGGHKTSHRVK 122
LALCLLMLARG H ++KCSVCGKSF SYQALGGHKTSHR
Sbjct: 60 LALCLLMLARGSSDHHSPPSDHHSLSPLSDHQKDYKCSVCGKSFPSYQALGGHKTSHR-- 117
Query: 123 XXXXXXXXXXXXXXXXXXXXXXEDREPATSSTAASSDGM---TNRVHRCSICQKEFPTGQ 179
+ ++ S+G+ + + H CSIC K FP+GQ
Sbjct: 118 ---------------KPVSVDVNNSNGTVTNNGNISNGLVGQSGKTHNCSICFKSFPSGQ 162
Query: 180 ALGGHKRKHY 189
ALGGHKR HY
Sbjct: 163 ALGGHKRCHY 172
>AT5G43170.1 | chr5:17331050-17331631 REVERSE LENGTH=194
Length = 193
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 88/204 (43%), Gaps = 62/204 (30%)
Query: 64 LALCLLMLARGGHHRVQXXXXXXXXXXXXXXXEFKCSVCGKSFSSYQALGGHKTSHRVKX 123
LA CL++LAR G +KC VC K+FSSYQALGGHK SHR
Sbjct: 50 LAFCLMLLARDG--------GDLDSVTVAEKPSYKCGVCYKTFSSYQALGGHKASHR--- 98
Query: 124 XXXXXXXXXXXXXXXXXXXXXEDREPATSSTAASSDGMTNRVHRCSICQKEFPTGQALGG 183
+ + +T STA S H CS+C K F TGQALGG
Sbjct: 99 ----------------SLYGGGENDKSTPSTAVKS-------HVCSVCGKSFATGQALGG 135
Query: 184 HKRKHYDXXXXXXXXXSSTELLATVAAESEVG-SSGNGQSATRAFDLNLPAVPEFVWRPC 242
HKR HYD V+ VG +S S+ R FDLN+ V F
Sbjct: 136 HKRCHYD---------------GGVSNSEGVGSTSHVSSSSHRGFDLNIIPVQGF----- 175
Query: 243 SKGKKMWDEEEEVQSPLAFKKPRL 266
++EV SP+A KKPRL
Sbjct: 176 -------SPDDEVMSPMATKKPRL 192
>AT2G28200.1 | chr2:12024321-12025181 FORWARD LENGTH=287
Length = 286
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 83/201 (41%), Gaps = 33/201 (16%)
Query: 63 NLALCLLMLARGG-------------HHRVQXXXXXXXXXXXXXXXEFKCSVCGKSFSSY 109
++A+CL+MLARG H ++ ++C C ++FSS+
Sbjct: 76 DMAICLIMLARGTVLPSPDLKNSRKIHQKISSENSSFYV--------YECKTCNRTFSSF 127
Query: 110 QALGGHKTSHRVKXXXXXXXXXXXXXXXXXXXXXXEDRE-------PATSSTAASSDGMT 162
QALGGH+ SH+ K E + A +S A++
Sbjct: 128 QALGGHRASHK-KPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALASQASNIINKA 186
Query: 163 NRVHRCSICQKEFPTGQALGGHKRKHYDXXXXXXXXXSSTELLATVAAES---EVGSSGN 219
N+VH CSIC EF +GQALGGH R+H ++ E+ E +G S
Sbjct: 187 NKVHECSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTEEEIEINIGRSME 246
Query: 220 GQSATRAFDLNLPAVPEFVWR 240
Q DLNLPA PE R
Sbjct: 247 QQRKYLPLDLNLPA-PEDDLR 266
>AT1G49900.1 | chr1:18474108-18477643 REVERSE LENGTH=918
Length = 917
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 50/94 (53%), Gaps = 17/94 (18%)
Query: 97 FKCSVCGKSFSSYQALGGHKTSHRVKXXXXXXXXXXXXXXXXXXXXXXEDREPATSSTAA 156
FKCS+C K F+SYQALGGHK SH +K D T S
Sbjct: 193 FKCSICEKVFTSYQALGGHKASHSIKAAQLENAGA--------------DAGEKTRSKML 238
Query: 157 SSDGMTNRVHRCSICQKEFPTGQALGGHKRKHYD 190
S G ++H+C IC FPTGQALGGHKR+HY+
Sbjct: 239 SPSG---KIHKCDICHVLFPTGQALGGHKRRHYE 269
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 60/132 (45%), Gaps = 24/132 (18%)
Query: 97 FKCSVCGKSFSSYQALGGHKTSHRVKXXXXXXXXXXXXXXXXXXXXXXEDREPATSSTAA 156
++C+VCG+ SYQALGGHK SHR K E P + +
Sbjct: 750 YQCNVCGRELPSYQALGGHKASHRTKPPVENATG--------------EKMRPKKLAPSG 795
Query: 157 SSDGMTNRVHRCSICQKEFPTGQALGGHKRKHYDXXXXXXXXXSSTELLATVAAESEVGS 216
++H+CSIC +EF TGQ+LGGHKR HY+ E V+ ++
Sbjct: 796 -------KIHKCSICHREFSTGQSLGGHKRLHYEGVLRGHKRSQEKE---AVSQGDKLSP 845
Query: 217 SGNGQSATRAFD 228
SGNG T D
Sbjct: 846 SGNGSVVTHVPD 857
>AT5G61470.1 | chr5:24722870-24723784 FORWARD LENGTH=305
Length = 304
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 44/95 (46%), Gaps = 25/95 (26%)
Query: 96 EFKCSVCGKSFSSYQALGGHKTSHRVKXXXXXXXXXXXXXXXXXXXXXXEDREPATSSTA 155
++ C CGK SYQALGGH+TSH+ K R +
Sbjct: 227 KYTCDTCGKVLRSYQALGGHRTSHKYK------------------------RLKISDKNY 262
Query: 156 ASSDG-MTNRVHRCSICQKEFPTGQALGGHKRKHY 189
DG + R + C IC + F +GQALGGHK+ HY
Sbjct: 263 FGEDGPIVRRQYECQICNRMFASGQALGGHKKIHY 297
>AT3G46080.1 | chr3:16922753-16923247 REVERSE LENGTH=165
Length = 164
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 55/130 (42%), Gaps = 44/130 (33%)
Query: 65 ALCLLMLAR------GGHHRVQXXXXXXXXXXXXXXXEFKCSVCGKSFSSYQALGGHKTS 118
A CL++L+R GG RV F+C C K FSS+QALGGH+ S
Sbjct: 16 AKCLMLLSRVGECGGGGEKRV-----------------FRCKTCLKEFSSFQALGGHRAS 58
Query: 119 HRVKXXXXXXXXXXXXXXXXXXXXXXEDREPATSSTAASSDGMTNRVHRCSICQKEFPTG 178
H+ +P+ + ++ T H C IC EFP G
Sbjct: 59 HK---------------------KLINSSDPSLLGSLSNKKTKTATSHPCPICGVEFPMG 97
Query: 179 QALGGHKRKH 188
QALGGH R+H
Sbjct: 98 QALGGHMRRH 107
>AT3G46070.1 | chr3:16920445-16920957 REVERSE LENGTH=171
Length = 170
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 69/187 (36%), Gaps = 34/187 (18%)
Query: 65 ALCLLMLARGGHHRVQXXXXXXXXXXXXXXXEFKCSVCGKSFSSYQALGGHKTSHRVKXX 124
A CL++L+ G H + F+C C + F S+QALGGH+ SH
Sbjct: 16 ASCLMLLSGIGEHDGRKKRV------------FRCKTCERDFDSFQALGGHRASH----- 58
Query: 125 XXXXXXXXXXXXXXXXXXXXEDREPATSSTAASSDGMTNRVHRCSICQKEFPTGQALGGH 184
+D+ S T H C IC EFP GQALGGH
Sbjct: 59 --------------SKLTNSDDKSLPGSPKKKPKTTTTTTAHTCPICGLEFPMGQALGGH 104
Query: 185 KRKHYDXX--XXXXXXXSSTELLATVAAESEVGSSGNGQSATRAFDLNLPAVPEFVWRPC 242
RKH + + + + + S +G+ D +L +V FV
Sbjct: 105 MRKHRNEKEREKASNVLVTHSFMPETTTVTTLKKSSSGKRVA-CLDFDLTSVESFVNTEL 163
Query: 243 SKGKKMW 249
G+ M+
Sbjct: 164 ELGRTMY 170
>AT5G56200.1 | chr5:22747768-22749249 FORWARD LENGTH=494
Length = 493
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 40/91 (43%)
Query: 99 CSVCGKSFSSYQALGGHKTSHRVKXXXXXXXXXXXXXXXXXXXXXXEDREPATSSTAASS 158
C C KSFSSYQALGGH+ SH + T S
Sbjct: 344 CVTCNKSFSSYQALGGHRASHNKVKILENHQARANAEASLLGTEAIITGLASAQGTNTSL 403
Query: 159 DGMTNRVHRCSICQKEFPTGQALGGHKRKHY 189
N H C+IC K F TGQALGGHKR H+
Sbjct: 404 SSSHNGDHVCNICHKSFSTGQALGGHKRCHW 434
>AT2G17180.1 | chr2:7476835-7477647 REVERSE LENGTH=271
Length = 270
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 57/129 (44%), Gaps = 18/129 (13%)
Query: 63 NLALCLLMLARGGHHRVQXXXXXXXXXXXXXXXEFKCSVCGKSFSSYQALGGHKTSHR-V 121
N+A CLLM+A G F+C C K F S+QALGGH+ +H+ V
Sbjct: 124 NIASCLLMMANG----------DVPTRSSEVEERFECDGCKKVFGSHQALGGHRATHKDV 173
Query: 122 KXXXXXXXXXXXXXXXXXXXXXXEDREPATSSTAASSDGMTNRVHRCSICQKEFPTGQAL 181
K +D+ + + GM HRC+IC + F +GQAL
Sbjct: 174 KGCFANKNITEDPPPPPPQEIVDQDKGKSVKLVS----GMN---HRCNICSRVFSSGQAL 226
Query: 182 GGHKRKHYD 190
GGH R H++
Sbjct: 227 GGHMRCHWE 235
>AT5G03510.1 | chr5:880353-881231 FORWARD LENGTH=293
Length = 292
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 97 FKCSVCGKSFSSYQALGGHKTSHRVKXXXXXXXXXXXXXXXXXXXXXXEDREPAT----- 151
++C C KSF S+QALGGH+ SH K E E
Sbjct: 118 YQCKTCDKSFHSFQALGGHRASH--KKPKLGASVFKCVEKKTASASTVETVEAGAVGSFL 175
Query: 152 SSTAASSDGMTN--RVHRCSICQKEFPTGQALGGHKRKH 188
S SSDG + H CSIC+ EF +GQALGGH R+H
Sbjct: 176 SLQVTSSDGSKKPEKTHECSICKAEFSSGQALGGHMRRH 214
>AT1G02030.1 | chr1:355385-356188 REVERSE LENGTH=268
Length = 267
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 41/92 (44%), Gaps = 20/92 (21%)
Query: 97 FKCSVCGKSFSSYQALGGHKTSHRVKXXXXXXXXXXXXXXXXXXXXXXEDREPATSSTAA 156
F+C C K F SYQALGGH+ SH+ K E + +
Sbjct: 160 FECETCEKVFKSYQALGGHRASHKKKIA--------------------ETDQLGSDELKK 199
Query: 157 SSDGMTNRVHRCSICQKEFPTGQALGGHKRKH 188
T+ H C IC K F +GQALGGHKR H
Sbjct: 200 KKKKSTSSHHECPICAKVFTSGQALGGHKRSH 231
>AT3G10470.1 | chr3:3260424-3261620 FORWARD LENGTH=399
Length = 398
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 97 FKCSVCGKSFSSYQALGGHKTSHRVKXXXXXXXXXXXXXXXXXXXXXXEDREPATSSTAA 156
++C C ++F S+QALGGH+ SH+ ++T
Sbjct: 182 YQCKTCDRTFPSFQALGGHRASHKKPKAAMGLHSNHDHKKSNYDDAVSLHLNNVLTTTPN 241
Query: 157 SSD----------GMTNRVHRCSICQKEFPTGQALGGHKRKH 188
++ G N+VH C IC EF +GQALGGH R+H
Sbjct: 242 NNSNHRSLVVYGKGSNNKVHECGICGAEFTSGQALGGHMRRH 283
>AT4G35280.1 | chr4:16787429-16788283 REVERSE LENGTH=285
Length = 284
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 58/133 (43%), Gaps = 34/133 (25%)
Query: 64 LALCLLMLARGGHHRVQXXXXXXXXXXXXXXXEFKCSVCGKSFSSYQALGGHKTSHR-VK 122
+A CLLML+ G F+C C K F S+QALGGH+ SH+ VK
Sbjct: 142 VASCLLMLSNG-------------TPSSSSIERFECGGCKKVFGSHQALGGHRASHKNVK 188
Query: 123 XXXXXXXXXXXXXXXXXXXXXXEDREPATSSTAASSDGMTNRV-----HRCSICQKEFPT 177
+P T ST++ D + H+C+IC + F +
Sbjct: 189 GCFAITNVTD---------------DPMTVSTSSGHDHQGKILTFSGHHKCNICFRVFSS 233
Query: 178 GQALGGHKRKHYD 190
GQALGGH R H++
Sbjct: 234 GQALGGHMRCHWE 246
>AT1G02040.1 | chr1:358104-359078 REVERSE LENGTH=325
Length = 324
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 64 LALCLLMLARGG------HHRVQXXXXXXXXXXXXXXXEFKCSVCGKSFSSYQALGGHKT 117
LA CL++L+ G H+ F+C C K F+S+QALGGH+
Sbjct: 111 LANCLVLLSNSGDAHGGDQHKQHGHGKGKTVKKQKTAQVFQCKACKKVFTSHQALGGHRA 170
Query: 118 SHR-------VKXXXXXXXXXXXXXXXXXXXXXXEDREPATSSTAASSDGMTNRVHRCSI 170
SH+ + E+ + STA + +N H C+I
Sbjct: 171 SHKKVKGCFASQDKEEEEEEEYKEDDDDNDEDEDEEEDEEDKSTAHIARKRSN-AHECTI 229
Query: 171 CQKEFPTGQALGGHKRKHY 189
C + F +GQALGGHKR H+
Sbjct: 230 CHRVFSSGQALGGHKRCHW 248
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.126 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,130,507
Number of extensions: 121002
Number of successful extensions: 557
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 509
Number of HSP's successfully gapped: 20
Length of query: 269
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 172
Effective length of database: 8,447,217
Effective search space: 1452921324
Effective search space used: 1452921324
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)