Os03g0755800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0755800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.73 | 0.354 | 9.04 | -0.0673 | 1.84 | 0.55 | -1.41 | -1.94 | -0.073 | 5.99 | 20 | 681 | -- | -- |
| 60.45 | 0.362 | 9.03 | 0.0195 | 1.84 | 0.512 | -0.633 | -- | -0.0307 | 5.94 | 13.52 | 625 | -- | -- |
| 60.04 | 0.361 | 9.03 | -0.033 | 1.85 | 0.557 | -- | -0.944 | -0.0442 | 6 | 21.27 | 680 | -- | -- |
| 61.27 | 0.365 | 9.03 | 0.0236 | 1.86 | 0.555 | -- | -- | -0.029 | 5.97 | 14.57 | 630 | -- | -- |
| 178.99 | 0.623 | 9.05 | -0.0366 | -- | 0.544 | -- | -1.43 | 0.0314 | -- | 46.81 | 1375 | -- | -- |
| 65.34 | 0.379 | 9.02 | 0.0718 | 1.53 | -- | -0.751 | -- | 0.0344 | 6.01 | -- | -- | -- | -- |
| 66.73 | 0.383 | 9.02 | 0.0653 | 1.53 | -- | -- | -- | 0.0373 | 6.02 | -- | -- | -- | -- |
| 179.06 | 0.623 | 9.05 | 0.116 | -- | 0.609 | -- | -- | 0.0384 | -- | 47.46 | 1375 | -- | -- |
| 61.25 | 0.364 | 9.03 | -- | 1.89 | 0.588 | -- | -- | -0.0346 | 5.93 | 13.32 | 625 | -- | -- |
| 187.91 | 0.641 | 9.04 | 0.11 | -- | -- | -- | -- | 0.072 | -- | -- | -- | -- | -- |
| 66.84 | 0.382 | 9.02 | -- | 1.53 | -- | -- | -- | 0.03 | 6.02 | -- | -- | -- | -- |
| 179.36 | 0.624 | 9.05 | -- | -- | 0.594 | -- | -- | 0.0282 | -- | 48.18 | 1375 | -- | -- |
| 188.23 | 0.64 | 9.05 | -- | -- | -- | -- | -- | 0.0598 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.60 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 3 | 55.05 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 7 | 55.16 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 8 | 55.19 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 24 | 12 |
| 16 | 55.21 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 18 | 55.22 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 3 | 9 |
| 23 | 55.34 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 6 | 6 |
| 24 | 55.34 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 24 | 12 |
| 43 | 55.36 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 5 | 7 |
| 58 | 55.37 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 3 | 9 |
| 64 | 55.40 | radiation | 40.0 | 30 | < th | dose independent | rect. | 8 | 19 |
| 67 | 55.41 | radiation | 10.0 | 1440 | > th | dose dependent | sin | 9 | NA |
| 68 | 55.42 | humidity | 80.0 | 720 | > th | dose independent | rect. | 21 | 17 |
| 71 | 55.48 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 18 | 18 |
| 75 | 55.54 | humidity | 80.0 | 720 | < th | dose independent | rect. | 23 | 15 |
| 77 | 55.55 | humidity | 80.0 | 720 | < th | dose independent | rect. | 21 | 17 |
| 94 | 55.61 | radiation | 40.0 | 720 | < th | dose independent | rect. | 13 | 20 |
| 95 | 55.61 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 23 |
| 103 | 55.65 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 12 | 11 |
| 106 | 55.69 | radiation | 30.0 | 1440 | < th | dose independent | sin | 9 | NA |
| 110 | 55.72 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 119 | 55.76 | radiation | 40.0 | 1440 | < th | dose dependent | sin | 8 | NA |
| 140 | 55.77 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 5 | 13 |
| 167 | 55.81 | radiation | 20.0 | 1440 | > th | dose independent | sin | 9 | NA |
| 184 | 55.83 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 6 | 11 |
| 186 | 55.84 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 16 | 20 |
| 192 | 55.87 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 223 | 55.90 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 21 | 21 |
| 252 | 55.96 | humidity | 80.0 | 720 | < th | dose dependent | sin | 9 | NA |
| 261 | 56.00 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 12 |
| 263 | 56.00 | radiation | 40.0 | 720 | < th | dose independent | rect. | 6 | 12 |
| 264 | 56.00 | humidity | 80.0 | 720 | < th | dose independent | rect. | 18 | 19 |
| 265 | 56.01 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 287 | 56.07 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 291 | 56.08 | radiation | 40.0 | 720 | < th | dose independent | rect. | 21 | 21 |
| 300 | 56.09 | wind | 7.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 343 | 56.14 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 351 | 56.16 | humidity | 80.0 | 720 | < th | dose independent | sin | 7 | NA |
| 446 | 56.22 | wind | 7.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 473 | 56.24 | wind | 7.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 541 | 56.28 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 583 | 56.35 | radiation | 30.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 584 | 56.35 | wind | 7.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 599 | 56.38 | humidity | 80.0 | 720 | > th | dose independent | rect. | 21 | 13 |
| 605 | 56.40 | wind | 3.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 606 | 56.40 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 616 | 56.41 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 10 |
| 617 | 56.41 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 10 |
| 649 | 56.43 | radiation | 30.0 | 720 | > th | dose independent | sin | 4 | NA |
| 652 | 56.43 | temperature | 15.0 | 90 | > th | dose independent | rect. | 3 | 18 |
| 661 | 56.46 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 727 | 56.52 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 16 | 14 |
| 733 | 56.52 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 736 | 56.53 | humidity | 80.0 | 720 | > th | dose independent | rect. | 6 | 2 |
| 799 | 56.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 10 |
| 807 | 56.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 10 |
| 882 | 56.61 | humidity | 70.0 | 10 | > th | dose independent | rect. | 8 | 20 |
| 915 | 56.63 | wind | 7.0 | 10 | < th | dose independent | rect. | 4 | 17 |
| 949 | 56.66 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 961 | 56.67 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 968 | 56.69 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 969 | 56.69 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 981 | 56.71 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 983 | 56.71 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 21 | 6 |
| 985 | 56.71 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 986 | 56.71 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 988 | 56.71 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 21 | 6 |