BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0755800 Os03g0755800|Os03g0755800
         (494 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G26190.1  | chr4:13262473-13266282 REVERSE LENGTH=1058         134   2e-31
AT2G36540.1  | chr2:15325237-15326449 FORWARD LENGTH=250          112   4e-25
AT2G36550.1  | chr2:15327773-15328802 FORWARD LENGTH=142          104   1e-22
AT3G29760.1  | chr3:11590064-11591833 REVERSE LENGTH=466           80   3e-15

>AT4G26190.1 | chr4:13262473-13266282 REVERSE LENGTH=1058
          Length = 1057

 Score =  134 bits (336), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/127 (50%), Positives = 83/127 (65%)

Query: 365  DMSKCTFTGHKTLENIHKPLVLKELRKLWNKEEPDLPWEQGYYSPSNTLLVDDSPYKALR 424
            D + CT T  KT E   KPL LK+LR++W+     +   +  Y  +NTLLVDDSP KAL 
Sbjct: 925  DQNICTTTKFKTQEKKDKPLFLKDLRRVWDHIGTCISCGKRKYDETNTLLVDDSPDKALC 984

Query: 425  NPPYTAIFPQPYSYLNSNDNSLGPGGDLRVYLENLTVAEDVECYVRNNPFGQPFITQSDP 484
            NPP+T IFP PY Y N  D++LGP G+LR YLE L  AE+V+ +V  NPFGQ  IT++  
Sbjct: 985  NPPHTGIFPSPYQYTNRQDSALGPEGELRKYLERLADAENVQKFVAENPFGQTAITETHE 1044

Query: 485  HWSFYAQ 491
             W FY++
Sbjct: 1045 SWEFYSK 1051



>AT2G36540.1 | chr2:15325237-15326449 FORWARD LENGTH=250
          Length = 249

 Score =  112 bits (281), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 57/126 (45%), Positives = 79/126 (62%), Gaps = 8/126 (6%)

Query: 368 KCTFTGHKTLENIHKPLVLKELRKLWNKEEPDLPWEQGYYSPSNTLLVDDSPYKALRNPP 427
           +CT +G+KTLEN +KPL  K+L K++          +G+ S SNT+ +DD PYKALRNP 
Sbjct: 128 ECTDSGYKTLENRYKPLFFKDLSKVFK-------CFKGF-SASNTIFIDDEPYKALRNPD 179

Query: 428 YTAIFPQPYSYLNSNDNSLGPGGDLRVYLENLTVAEDVECYVRNNPFGQPFITQSDPHWS 487
            T +FP  Y   N  DN L P G+L  YLE L  + DV+ Y++ + FG+P I  S P WS
Sbjct: 180 NTGLFPMSYDASNIKDNLLDPEGELCSYLEGLAKSSDVQAYIKVHSFGRPMIDSSHPDWS 239

Query: 488 FYAQIA 493
           FY+ ++
Sbjct: 240 FYSNVS 245



>AT2G36550.1 | chr2:15327773-15328802 FORWARD LENGTH=142
          Length = 141

 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/135 (39%), Positives = 79/135 (58%), Gaps = 8/135 (5%)

Query: 359 HMADAKDMSKCTFTGHKTLENIHKPLVLKELRKLWNKEEPDLPWEQGYYSPSNTLLVDDS 418
           H+    D  KCT +G+KTLEN  KPL  K+L K++   +         +S SNT+ +++ 
Sbjct: 11  HVDQILDQEKCTDSGYKTLENSDKPLFFKDLSKVFQCFKG--------FSASNTIFIEEE 62

Query: 419 PYKALRNPPYTAIFPQPYSYLNSNDNSLGPGGDLRVYLENLTVAEDVECYVRNNPFGQPF 478
           PYKAL NP  T +FP  Y   ++ DN L P G+   YL+ L  + DV+ Y++ +PFGQP 
Sbjct: 63  PYKALLNPDNTGVFPLSYDPSDTKDNLLDPEGEFCSYLDGLANSSDVQAYIKEHPFGQPM 122

Query: 479 ITQSDPHWSFYAQIA 493
           I  S   WS+Y +++
Sbjct: 123 IDSSHLDWSYYRRVS 137



>AT3G29760.1 | chr3:11590064-11591833 REVERSE LENGTH=466
          Length = 465

 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 48/67 (71%)

Query: 365 DMSKCTFTGHKTLENIHKPLVLKELRKLWNKEEPDLPWEQGYYSPSNTLLVDDSPYKALR 424
           DMS C  T   +LEN +K +V K+L +LW K +P LPW+ G Y+ +NT+L+DDSPYKAL 
Sbjct: 388 DMSYCATTSVGSLENRYKYVVFKDLNRLWEKHDPRLPWKMGDYNETNTVLLDDSPYKALL 447

Query: 425 NPPYTAI 431
           NP Y+ I
Sbjct: 448 NPQYSLI 454



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.316    0.133    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,680,579
Number of extensions: 477608
Number of successful extensions: 1030
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 1027
Number of HSP's successfully gapped: 4
Length of query: 494
Length of database: 11,106,569
Length adjustment: 103
Effective length of query: 391
Effective length of database: 8,282,721
Effective search space: 3238543911
Effective search space used: 3238543911
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 114 (48.5 bits)