Os03g0750900 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0750900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	4.83	(0.045)	R²	:	0.166
β₁	:	-0.489	(0.195)	R²_dD	:	0.0185	R²_D	:	-0.0551
β₂	:	0.911	(0.121)	R²_dC	:	0.122	R²_C	:	0.0458
β₃	:	0.449	(0.0921)	R²_dE	:	0.0628	R²_E	:	-0.068
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	-2.16	(0.403)	R²_dD*E	:	0.0826	R²_D*E	:	0.0128
γ₁	:	-0.548	(0.109)	R²_dN8	:	0.0882	R²_N8	:	-0.0251
σ	:	0.801
deviance	:	295.47
__

_____

C
peak time of C	:	6.1
E
wheather	:	temperature
threshold	:	25.42
memory length	:	19
response mode	:	> th
dose dependency	:	dose independent
G
type of G	:	no
peak or start time of G	:	--
open length of G	:	--

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
295.4	0.808	4.83	-0.485	0.911	0.45	0.173	-2.14	-0.547	6.09	25.41	20	--	--
312.66	0.824	4.79	0.133	0.906	0.381	0.864	--	-0.361	5.81	25.5	18	--	--
295.47	0.801	4.83	-0.489	0.911	0.449	--	-2.16	-0.548	6.1	25.42	19	--	--
314	0.831	4.78	0.132	0.879	0.342	--	--	-0.327	6.13	25.2	10	--	--
333.04	0.85	4.77	-0.392	--	0.207	--	-2.05	-0.359	--	25.34	19	--	--
321.92	0.841	4.74	0.203	0.737	--	0.293	--	-0.162	6.94	--	--	--	--
322.11	0.84	4.74	0.209	0.737	--	--	--	-0.162	7.06	--	--	--	--
347.18	0.872	4.76	0.252	--	-0.456	--	--	-0.169	--	31.7	77	--	--
314.45	0.83	4.78	--	0.886	0.353	--	--	-0.347	6.09	25.2	10	--	--
350.71	0.875	4.76	0.223	--	--	--	--	-0.149	--	--	--	--	--
323.26	0.841	4.75	--	0.739	--	--	--	-0.186	7.05	--	--	--	--
347.19	0.868	4.77	--	--	-0.514	--	--	-0.207	--	31.86	113	--	--
352.03	0.876	4.76	--	--	--	--	--	-0.174	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	286.97	temperature	25.0	30	> th	dose independent	rect.	14	20
3	287.89	temperature	25.0	10	> th	dose dependent	sin	11	NA
19	293.04	temperature	25.0	10	> th	dose dependent	rect.	15	19
31	294.57	temperature	25.0	10	> th	dose dependent	rect.	18	16
35	295.06	wind	1.0	43200	< th	dose independent	rect.	18	10
39	295.65	wind	1.0	43200	> th	dose independent	rect.	18	10
43	295.95	wind	1.0	43200	< th	dose independent	rect.	20	8
49	296.13	wind	1.0	43200	< th	dose independent	rect.	17	12
54	296.29	wind	1.0	43200	> th	dose independent	rect.	20	8
66	297.30	wind	1.0	43200	< th	dose dependent	rect.	18	11
76	297.83	wind	5.0	30	< th	dose dependent	rect.	5	14
80	298.15	precipitation	0.1	10	< th	dose independent	rect.	3	9
81	298.15	precipitation	0.1	10	< th	dose dependent	rect.	3	9
83	298.21	wind	3.0	30	< th	dose independent	rect.	5	14
91	298.43	temperature	25.0	10	> th	dose independent	rect.	6	20
98	298.59	temperature	25.0	10	< th	dose independent	rect.	12	16
109	298.96	wind	1.0	270	< th	dose independent	rect.	8	1
119	299.19	radiation	40.0	90	< th	dose independent	rect.	3	9
120	299.19	temperature	25.0	10	> th	dose independent	rect.	15	10
121	299.19	temperature	25.0	10	> th	dose independent	rect.	15	12
133	299.36	wind	1.0	270	< th	dose dependent	rect.	8	2
136	299.38	wind	1.0	43200	< th	dose dependent	sin	14	NA
155	299.67	humidity	80.0	43200	> th	dose dependent	rect.	14	1
156	299.70	temperature	25.0	1440	> th	dose independent	rect.	21	1
160	299.80	temperature	25.0	1440	< th	dose independent	rect.	21	1
172	299.99	temperature	25.0	1440	> th	dose dependent	rect.	12	1
188	300.22	temperature	15.0	43200	> th	dose independent	rect.	24	1
202	300.37	temperature	25.0	30	> th	dose independent	sin	13	NA
214	300.55	temperature	15.0	43200	< th	dose independent	rect.	24	1
224	300.66	temperature	25.0	10	< th	dose independent	rect.	6	22
254	301.00	temperature	25.0	30	> th	dose independent	no	NA	NA
261	301.04	temperature	15.0	43200	> th	dose independent	rect.	2	1
271	301.13	temperature	25.0	30	> th	dose independent	rect.	22	23
277	301.17	temperature	25.0	30	> th	dose independent	rect.	8	23
313	301.39	radiation	10.0	43200	< th	dose independent	rect.	18	13
321	301.45	radiation	20.0	43200	< th	dose independent	rect.	17	3
328	301.47	temperature	25.0	1440	> th	dose dependent	rect.	12	10
331	301.50	radiation	10.0	43200	< th	dose independent	rect.	4	3
335	301.51	radiation	20.0	43200	< th	dose independent	rect.	17	5
337	301.51	radiation	10.0	43200	< th	dose independent	rect.	21	10
339	301.52	radiation	10.0	43200	< th	dose independent	rect.	1	6
355	301.57	radiation	20.0	43200	< th	dose independent	rect.	17	7
363	301.61	temperature	25.0	1440	> th	dose dependent	rect.	17	5
366	301.63	radiation	20.0	43200	< th	dose independent	rect.	17	9
389	301.76	temperature	30.0	1440	< th	dose independent	rect.	12	3
398	301.80	wind	9.0	30	< th	dose independent	rect.	3	9
400	301.81	temperature	10.0	30	> th	dose independent	rect.	3	9
402	301.81	atmosphere	995.0	30	> th	dose independent	rect.	3	9
403	301.81	atmosphere	1015.0	30	< th	dose independent	rect.	3	9
405	301.81	temperature	10.0	30	> th	dose independent	rect.	12	15
425	301.87	radiation	1.0	43200	> th	dose dependent	rect.	18	12
447	301.98	temperature	15.0	43200	< th	dose dependent	rect.	23	1
450	301.99	temperature	25.0	30	> th	dose independent	rect.	20	23
454	302.00	temperature	20.0	43200	< th	dose independent	rect.	14	1
461	302.02	wind	1.0	43200	< th	dose independent	sin	14	NA
473	302.06	wind	3.0	90	< th	dose independent	sin	23	NA
493	302.12	temperature	25.0	10	< th	dose independent	rect.	13	23
508	302.16	radiation	40.0	43200	< th	dose independent	rect.	7	1
523	302.20	radiation	40.0	43200	< th	dose independent	rect.	4	4
532	302.22	temperature	20.0	43200	> th	dose independent	rect.	14	1
545	302.26	radiation	40.0	43200	< th	dose independent	rect.	19	13
547	302.26	temperature	25.0	1440	> th	dose dependent	rect.	17	1
554	302.28	radiation	40.0	43200	< th	dose independent	rect.	15	17
555	302.28	radiation	30.0	43200	> th	dose dependent	rect.	7	1
572	302.29	temperature	15.0	43200	> th	dose independent	sin	11	NA
580	302.30	temperature	25.0	1440	> th	dose dependent	sin	17	NA
586	302.31	temperature	15.0	43200	> th	dose independent	rect.	21	15
595	302.32	temperature	15.0	43200	> th	dose independent	rect.	23	13
608	302.33	temperature	25.0	90	< th	dose independent	rect.	7	22
609	302.33	humidity	50.0	43200	< th	dose dependent	rect.	9	2
619	302.35	wind	9.0	30	< th	dose independent	rect.	12	15
621	302.36	radiation	40.0	43200	< th	dose independent	rect.	21	11
626	302.36	radiation	1.0	43200	> th	dose dependent	rect.	4	2
646	302.38	radiation	40.0	43200	< th	dose independent	rect.	23	9
656	302.39	radiation	40.0	43200	< th	dose independent	rect.	1	7
671	302.41	humidity	50.0	43200	< th	dose dependent	rect.	4	7
705	302.46	wind	3.0	90	< th	dose independent	rect.	5	18
789	302.61	wind	5.0	1440	< th	dose dependent	rect.	19	1
797	302.63	temperature	15.0	43200	> th	dose independent	rect.	9	3
818	302.66	humidity	90.0	43200	> th	dose independent	rect.	13	16
821	302.66	wind	3.0	90	< th	dose dependent	sin	22	NA
822	302.66	radiation	10.0	43200	< th	dose dependent	rect.	4	2
840	302.69	wind	3.0	1440	> th	dose independent	rect.	19	1
841	302.69	temperature	15.0	43200	< th	dose independent	rect.	11	1
842	302.69	temperature	30.0	1440	< th	dose independent	rect.	13	1
849	302.69	humidity	50.0	43200	< th	dose dependent	rect.	19	16
852	302.70	radiation	10.0	43200	< th	dose dependent	rect.	19	11
854	302.71	temperature	15.0	43200	> th	dose independent	rect.	11	1
858	302.72	radiation	1.0	43200	> th	dose independent	rect.	4	1
878	302.72	radiation	10.0	43200	< th	dose dependent	rect.	1	5
892	302.73	radiation	10.0	43200	< th	dose dependent	rect.	21	9
898	302.74	radiation	1.0	43200	< th	dose dependent	rect.	9	1
911	302.78	precipitation	0.1	30	< th	dose independent	rect.	12	15
913	302.78	temperature	15.0	43200	> th	dose independent	rect.	9	20
917	302.78	precipitation	0.1	30	< th	dose dependent	rect.	12	15
920	302.79	temperature	25.0	30	< th	dose independent	rect.	11	23
924	302.80	radiation	1.0	43200	> th	dose independent	rect.	8	2
929	302.80	temperature	25.0	30	< th	dose independent	rect.	19	23
948	302.83	temperature	15.0	43200	< th	dose independent	rect.	9	3
953	302.83	temperature	25.0	30	< th	dose independent	rect.	17	23
957	302.84	temperature	25.0	4320	< th	dose independent	rect.	9	1
969	302.85	temperature	25.0	30	< th	dose independent	rect.	9	23
971	302.86	temperature	15.0	43200	< th	dose independent	sin	11	NA
972	302.86	temperature	25.0	30	< th	dose independent	no	NA	NA
993	302.88	temperature	15.0	43200	< th	dose independent	rect.	21	15