Os03g0748500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Flavodoxin/nitric oxide synthase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0748500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Flavodoxin/nitric oxide synthase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 324.49 | 0.846 | 3.85 | 1.92 | 0.909 | 1.31 | -0.709 | -1.07 | 0.212 | 21.8 | 25.6 | 5328 | -- | -- |
| 325.16 | 0.84 | 3.87 | 1.64 | 0.888 | 1.35 | -0.922 | -- | 0.167 | 21.8 | 26.1 | 5401 | -- | -- |
| 326.4 | 0.841 | 3.85 | 1.9 | 0.912 | 1.31 | -- | -0.898 | 0.201 | 21.8 | 25.59 | 5328 | -- | -- |
| 326.52 | 0.842 | 3.88 | 1.65 | 0.898 | 1.34 | -- | -- | 0.155 | 21.8 | 26.1 | 5420 | -- | -- |
| 368.86 | 0.894 | 3.82 | 1.86 | -- | 1.26 | -- | -0.809 | 0.221 | -- | 26.1 | 5779 | -- | -- |
| 372.09 | 0.904 | 3.94 | 1.08 | 0.799 | -- | -0.776 | -- | -0.117 | 21.5 | -- | -- | -- | -- |
| 374.31 | 0.906 | 3.94 | 1.11 | 0.803 | -- | -- | -- | -0.116 | 21.5 | -- | -- | -- | -- |
| 369.34 | 0.895 | 3.86 | 1.63 | -- | 1.22 | -- | -- | 0.154 | -- | 26.1 | 5779 | -- | -- |
| 388.87 | 0.918 | 3.96 | -- | 0.856 | 0.741 | -- | -- | -0.13 | 21.8 | 25.7 | 4077 | -- | -- |
| 412.21 | 0.949 | 3.92 | 1.12 | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
| 406.9 | 0.944 | 3.97 | -- | 0.804 | -- | -- | -- | -0.24 | 21.6 | -- | -- | -- | -- |
| 423.78 | 0.959 | 3.93 | -- | -- | 0.672 | -- | -- | -0.154 | -- | 28.8 | 5736 | -- | -- |
| 445.14 | 0.985 | 3.95 | -- | -- | -- | -- | -- | -0.242 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 321.11 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 2 | 321.26 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 4 | 321.43 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 5 | 321.45 | temperature | 25 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 76 | 323.91 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 3 |
| 88 | 324.14 | temperature | 25 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 110 | 324.50 | temperature | 25 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 121 | 324.67 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 17 |
| 127 | 324.76 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 130 | 324.80 | temperature | 25 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 138 | 324.87 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 139 | 324.87 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 17 |
| 153 | 324.92 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 17 |
| 154 | 324.94 | temperature | 25 | 14400 | < th | dose independent | sin | 17 | NA |
| 168 | 324.98 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 232 | 325.19 | temperature | 25 | 14400 | > th | dose independent | sin | 17 | NA |
| 249 | 325.22 | temperature | 20 | 14400 | > th | dose dependent | sin | 12 | NA |
| 277 | 325.28 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 318 | 325.37 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 332 | 325.39 | temperature | 20 | 14400 | > th | dose dependent | rect. | 1 | 9 |
| 353 | 325.42 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 14 |
| 460 | 325.56 | temperature | 20 | 14400 | > th | dose dependent | rect. | 24 | 22 |
| 489 | 325.59 | temperature | 25 | 14400 | > th | dose dependent | sin | 1 | NA |
| 499 | 325.60 | temperature | 20 | 14400 | > th | dose dependent | no | NA | NA |
| 503 | 325.60 | temperature | 20 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 504 | 325.60 | temperature | 20 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 524 | 325.62 | temperature | 25 | 14400 | < th | dose independent | rect. | 14 | 20 |
| 559 | 325.65 | temperature | 20 | 14400 | > th | dose dependent | rect. | 6 | 20 |
| 610 | 325.69 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 708 | 325.80 | temperature | 20 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 709 | 325.80 | temperature | 25 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 758 | 325.85 | temperature | 25 | 14400 | > th | dose independent | rect. | 14 | 20 |
| 864 | 325.95 | temperature | 25 | 4320 | > th | dose independent | rect. | 14 | 17 |