Os03g0748200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Inhibitor of growth protein 3 (p47ING3 protein).
FiT-DB / Search/ Help/ Sample detail
|
Os03g0748200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Inhibitor of growth protein 3 (p47ING3 protein).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.99 | 0.199 | 10.8 | -0.736 | 0.472 | 0.46 | -0.0708 | -0.835 | -0.0604 | 9.24 | 9.911 | 704 | -- | -- |
| 18.44 | 0.2 | 10.8 | -0.593 | 0.475 | 0.453 | 0.0939 | -- | -0.0213 | 9.23 | 12.73 | 698 | -- | -- |
| 18 | 0.198 | 10.8 | -0.727 | 0.471 | 0.463 | -- | -0.777 | -0.0571 | 9.24 | 10.72 | 704 | -- | -- |
| 18.47 | 0.2 | 10.8 | -0.589 | 0.473 | 0.449 | -- | -- | -0.021 | 9.24 | 12.74 | 708 | -- | -- |
| 26.03 | 0.239 | 10.8 | -0.608 | -- | 0.454 | -- | -0.35 | -0.0241 | -- | 10.72 | 704 | -- | -- |
| 20.99 | 0.215 | 10.8 | -0.478 | 0.37 | -- | 0.0559 | -- | 0.0481 | 9.48 | -- | -- | -- | -- |
| 21 | 0.215 | 10.8 | -0.476 | 0.37 | -- | -- | -- | 0.0481 | 9.47 | -- | -- | -- | -- |
| 26.14 | 0.239 | 10.8 | -0.56 | -- | 0.447 | -- | -- | -0.0108 | -- | 12.74 | 708 | -- | -- |
| 26.52 | 0.24 | 10.7 | -- | 0.413 | 0.148 | -- | -- | 0.079 | 9.3 | 20.08 | 605 | -- | -- |
| 29.04 | 0.252 | 10.8 | -0.478 | -- | -- | -- | -- | 0.0492 | -- | -- | -- | -- | -- |
| 26.97 | 0.243 | 10.7 | -- | 0.371 | -- | -- | -- | 0.101 | 9.57 | -- | -- | -- | -- |
| 30.41 | 0.257 | 10.7 | -- | -- | -0.309 | -- | -- | 0.223 | -- | 26 | 47520 | -- | -- |
| 35.08 | 0.276 | 10.8 | -- | -- | -- | -- | -- | 0.102 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.89 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 2 | 17.06 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 4 | 17.09 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 5 | 17.09 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 9 | 17.14 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 16 | 17.22 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 20 | 17.24 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 21 | 17.25 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 30 | 17.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 31 | 17.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 45 | 17.33 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 11 |
| 46 | 17.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 50 | 17.34 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 11 |
| 58 | 17.36 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 63 | 17.37 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 77 | 17.37 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 78 | 17.37 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 13 |
| 83 | 17.38 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 106 | 17.42 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 4 |
| 117 | 17.44 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 125 | 17.45 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 151 | 17.48 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 178 | 17.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 213 | 17.55 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 269 | 17.59 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 19 |
| 275 | 17.60 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 293 | 17.61 | temperature | 15 | 30 | > th | dose dependent | rect. | 12 | 23 |
| 335 | 17.65 | humidity | 90 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 374 | 17.67 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 481 | 17.74 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 492 | 17.74 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 17 | 16 |
| 499 | 17.75 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 515 | 17.75 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 525 | 17.76 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 541 | 17.76 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 544 | 17.76 | atmosphere | 1010 | 30 | < th | dose dependent | rect. | 17 | 18 |
| 573 | 17.78 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 7 | 8 |
| 606 | 17.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 608 | 17.79 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 609 | 17.79 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 612 | 17.79 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 635 | 17.80 | humidity | 90 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 705 | 17.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 743 | 17.83 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 13 | 3 |
| 835 | 17.85 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 2 |
| 838 | 17.85 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 842 | 17.85 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 890 | 17.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 891 | 17.86 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 892 | 17.86 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 898 | 17.86 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 948 | 17.86 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 949 | 17.87 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 956 | 17.87 | humidity | 90 | 14400 | > th | dose dependent | sin | 11 | NA |
| 958 | 17.87 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 1 |