Os03g0740600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Deoxyhypusine synthase (EC 2.5.1.46).
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Os03g0740600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Deoxyhypusine synthase (EC 2.5.1.46).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.56 | 0.242 | 9.35 | -0.184 | 0.103 | -0.74 | 0.395 | 1.56 | -0.094 | 18.9 | 26.97 | 1243 | -- | -- |
| 27.02 | 0.242 | 9.39 | -0.537 | 0.108 | -0.596 | 0.5 | -- | -0.141 | 19.7 | 26.86 | 1192 | -- | -- |
| 26.92 | 0.242 | 9.35 | -0.183 | 0.108 | -0.737 | -- | 1.61 | -0.0945 | 17.9 | 27.05 | 1251 | -- | -- |
| 27.37 | 0.244 | 9.39 | -0.55 | 0.104 | -0.571 | -- | -- | -0.162 | 18 | 26.98 | 1234 | -- | -- |
| 27.48 | 0.244 | 9.35 | -0.199 | -- | -0.73 | -- | 1.49 | -0.0932 | -- | 26.9 | 1277 | -- | -- |
| 40.67 | 0.299 | 9.4 | -0.725 | 0.161 | -- | 0.278 | -- | -0.163 | 16.3 | -- | -- | -- | -- |
| 40.83 | 0.299 | 9.39 | -0.722 | 0.163 | -- | -- | -- | -0.162 | 15.7 | -- | -- | -- | -- |
| 27.92 | 0.246 | 9.39 | -0.548 | -- | -0.573 | -- | -- | -0.156 | -- | 26.87 | 1263 | -- | -- |
| 34.73 | 0.274 | 9.37 | -- | 0.0943 | -0.665 | -- | -- | -0.0701 | 18 | 26.01 | 1303 | -- | -- |
| 42.31 | 0.304 | 9.39 | -0.729 | -- | -- | -- | -- | -0.166 | -- | -- | -- | -- | -- |
| 54.58 | 0.346 | 9.38 | -- | 0.178 | -- | -- | -- | -0.0813 | 15.6 | -- | -- | -- | -- |
| 35.19 | 0.276 | 9.37 | -- | -- | -0.676 | -- | -- | -0.0617 | -- | 25.91 | 1305 | -- | -- |
| 56.33 | 0.35 | 9.38 | -- | -- | -- | -- | -- | -0.0852 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.99 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 3 |
| 6 | 26.20 | humidity | 80 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 29 | 26.56 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 42 | 26.68 | radiation | 1 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 51 | 26.72 | radiation | 40 | 1440 | < th | dose dependent | rect. | 17 | 11 |
| 59 | 26.77 | humidity | 50 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 67 | 26.78 | radiation | 20 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 77 | 26.80 | humidity | 80 | 1440 | < th | dose dependent | rect. | 15 | 18 |
| 78 | 26.81 | temperature | 25 | 1440 | > th | dose dependent | sin | 20 | NA |
| 82 | 26.81 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 16 |
| 89 | 26.83 | radiation | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 132 | 26.88 | humidity | 50 | 1440 | > th | dose dependent | rect. | 17 | 3 |
| 227 | 27.06 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 13 |
| 229 | 27.06 | humidity | 80 | 720 | < th | dose dependent | sin | 13 | NA |
| 235 | 27.08 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 11 |
| 241 | 27.09 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 9 |
| 298 | 27.18 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 320 | 27.21 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 336 | 27.24 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 3 |
| 383 | 27.29 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 13 |
| 402 | 27.31 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 424 | 27.34 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 436 | 27.34 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 444 | 27.36 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 5 |
| 522 | 27.51 | humidity | 70 | 1440 | > th | dose independent | sin | 13 | NA |
| 526 | 27.52 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 10 |
| 591 | 27.69 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 10 |
| 597 | 27.70 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 8 |
| 629 | 27.75 | humidity | 70 | 720 | < th | dose independent | sin | 12 | NA |
| 634 | 27.76 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 10 |
| 729 | 27.91 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 746 | 27.92 | humidity | 50 | 1440 | > th | dose dependent | rect. | 6 | 16 |
| 820 | 27.98 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 827 | 27.98 | radiation | 40 | 1440 | < th | dose dependent | rect. | 20 | 10 |
| 849 | 27.99 | radiation | 30 | 1440 | < th | dose independent | rect. | 19 | 13 |