BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0740600 Os03g0740600|AK101589
         (375 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0740600  Similar to Deoxyhypusine synthase (EC 2.5.1.46)     750   0.0  
Os09g0421100  Similar to Deoxyhypusine synthase (EC 2.5.1.46)     483   e-136

>Os03g0740600 Similar to Deoxyhypusine synthase (EC 2.5.1.46)
          Length = 375

 Score =  750 bits (1936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/375 (96%), Positives = 362/375 (96%)

Query: 1   MAGAGGGGVRDMDALEGVRSIVLKPSESLDEGRFTRIAGADFNDXXXXXXXXXXXXXTTG 60
           MAGAGGGGVRDMDALEGVRSIVLKPSESLDEGRFTRIAGADFND             TTG
Sbjct: 1   MAGAGGGGVRDMDALEGVRSIVLKPSESLDEGRFTRIAGADFNDAGLGLPGLLASLATTG 60

Query: 61  FQASNLGDAVDVVNQMLDWRLSHEKPREDCDEAELDPTYRESVKCKIFLGFTSNLVSSGI 120
           FQASNLGDAVDVVNQMLDWRLSHEKPREDCDEAELDPTYRESVKCKIFLGFTSNLVSSGI
Sbjct: 61  FQASNLGDAVDVVNQMLDWRLSHEKPREDCDEAELDPTYRESVKCKIFLGFTSNLVSSGI 120

Query: 121 RDVVRFLVQHHMVDVIVTTAGGIEEDLIKCLAPTYRGEFSLPGTLLRSKGLNRIGNLLVP 180
           RDVVRFLVQHHMVDVIVTTAGGIEEDLIKCLAPTYRGEFSLPGTLLRSKGLNRIGNLLVP
Sbjct: 121 RDVVRFLVQHHMVDVIVTTAGGIEEDLIKCLAPTYRGEFSLPGTLLRSKGLNRIGNLLVP 180

Query: 181 NDNYCKFENWIMPLFDQMLQEQSTENVWTPSKVIACLGKEINDESSYLYWAYKNNIPVYC 240
           NDNYCKFENWIMPLFDQMLQEQSTENVWTPSKVIACLGKEINDESSYLYWAYKNNIPVYC
Sbjct: 181 NDNYCKFENWIMPLFDQMLQEQSTENVWTPSKVIACLGKEINDESSYLYWAYKNNIPVYC 240

Query: 241 PALTDGSLGDMLFCHAVRNPGLIIDIVQDIRLMNGEAIHATPRKTGIIVLGGGLPKHHIC 300
           PALTDGSLGDMLFCHAVRNPGLIIDIVQDIRLMNGEAIHATPRKTGIIVLGGGLPKHHIC
Sbjct: 241 PALTDGSLGDMLFCHAVRNPGLIIDIVQDIRLMNGEAIHATPRKTGIIVLGGGLPKHHIC 300

Query: 301 NANMFRNGADYAVYINTAQEFDGSDSGAQPDEAVSWGKIKGSAKPVKVHCDATIAFPLIV 360
           NANMFRNGADYAVYINTAQEFDGSDSGAQPDEAVSWGKIKGSAKPVKVHCDATIAFPLIV
Sbjct: 301 NANMFRNGADYAVYINTAQEFDGSDSGAQPDEAVSWGKIKGSAKPVKVHCDATIAFPLIV 360

Query: 361 AATFARKFHGAKQAN 375
           AATFARKFHGAKQAN
Sbjct: 361 AATFARKFHGAKQAN 375



>Os09g0421100 Similar to Deoxyhypusine synthase (EC 2.5.1.46)
          Length = 293

 Score =  483 bits (1242), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 248/340 (72%), Positives = 255/340 (75%), Gaps = 63/340 (18%)

Query: 10  RDMDALEGVRSIVLKPSESLDEGRFTRIAGADFNDXXXXXXXXXXXXXTTGFQASNLGDA 69
           RDMDAL+GVRSIVLKPSESLDEGRFTRIAGADFND             TTGFQASNLGDA
Sbjct: 16  RDMDALQGVRSIVLKPSESLDEGRFTRIAGADFNDAGLGLSGMLASLATTGFQASNLGDA 75

Query: 70  VDVVNQMLDWRLSHEKPREDCDEAELDPTYRESVKCKIFLGFTSNLVSSGIRDVVRFLVQ 129
           VDVVNQML+WRLSHEKPREDCDE ELDPTYRESVKCKIFLGFTSNLVSSGIRDVVRFLVQ
Sbjct: 76  VDVVNQMLEWRLSHEKPREDCDEPELDPTYRESVKCKIFLGFTSNLVSSGIRDVVRFLVQ 135

Query: 130 HHMVDVIVTTAGGIEEDLIKCLAPTYRGEFSLPGTLLRSKGLNRIGNLLVPNDNYCKFEN 189
           HHMVDVIVTTAGGIEEDLIKCLAPTYRG+FSLPGTLLRSKGLNRIGNLLVPNDNYCKFEN
Sbjct: 136 HHMVDVIVTTAGGIEEDLIKCLAPTYRGDFSLPGTLLRSKGLNRIGNLLVPNDNYCKFEN 195

Query: 190 WIMPLFDQMLQEQSTENVWTPSKVIACLGKEINDESSYLYWAYKNNIPVYCPALTDGSLG 249
           WIM                                            P++ P +T    G
Sbjct: 196 WIM--------------------------------------------PIFLPDVTRAIQG 211

Query: 250 DMLFCHAVRNPGLIIDIVQDIRLMNGEAIHATPRKTGIIVLGGGLPKHHICNANMFRNGA 309
           D                   IRLMNGEAIHATPRKTGIIVLGGGLPKHHICNANMFRNGA
Sbjct: 212 D-------------------IRLMNGEAIHATPRKTGIIVLGGGLPKHHICNANMFRNGA 252

Query: 310 DYAVYINTAQEFDGSDSGAQPDEAVSWGKIKGSAKPVKVH 349
           D+AVYINTAQEFDGSDSGAQPDEAVSWGKIKGSAKPVK  
Sbjct: 253 DFAVYINTAQEFDGSDSGAQPDEAVSWGKIKGSAKPVKAR 292



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.137    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,447,844
Number of extensions: 587926
Number of successful extensions: 1119
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1119
Number of HSP's successfully gapped: 3
Length of query: 375
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 273
Effective length of database: 11,709,973
Effective search space: 3196822629
Effective search space used: 3196822629
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)