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Os03g0737800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.8 (0.0139) R2 : 0.01
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0627 (0.0292) R2dN8 : 0.0129 R2N8 : 0.01
σ : 0.261
deviance : 31.32
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.87 0.22 9.79 0.249 0.206 0.615 -0.0126 -1.52 0.125 2.98 94.33 299 -- --
23.03 0.223 9.79 0.232 0.212 0.761 -0.148 -- 0.115 3.09 94.71 295 -- --
21.86 0.218 9.79 0.252 0.208 0.6 -- -1.51 0.126 2.95 94.28 306 -- --
23.1 0.224 9.79 0.237 0.21 0.776 -- -- 0.115 2.91 94.72 295 -- --
23.83 0.227 9.79 0.232 -- 0.673 -- -1.33 0.147 -- 93.6 258 -- --
25.42 0.236 9.8 0.237 0.275 -- -0.191 -- 0.0821 3.89 -- -- -- --
25.52 0.237 9.8 0.24 0.274 -- -- -- 0.0832 3.81 -- -- -- --
25.14 0.234 9.79 0.229 -- 0.867 -- -- 0.132 -- 94.47 210 -- --
24.54 0.231 9.8 -- 0.206 0.755 -- -- 0.0924 2.86 94.61 286 -- --
29.65 0.254 9.8 0.251 -- -- -- -- 0.0905 -- -- -- -- --
27.04 0.243 9.8 -- 0.278 -- -- -- 0.0565 3.8 -- -- -- --
26.51 0.24 9.79 -- -- 0.839 -- -- 0.11 -- 94.36 209 -- --
31.32 0.261 9.8 -- -- -- -- -- 0.0627 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.73 radiation 1 1440 > th dose independent rect. 10 4
3 20.80 radiation 1 1440 > th dose independent rect. 12 2
12 20.97 radiation 1 1440 < th dose independent rect. 10 4
13 20.97 radiation 1 1440 < th dose dependent rect. 10 4
16 21.01 radiation 1 1440 < th dose independent rect. 12 2
18 21.01 radiation 1 1440 < th dose dependent rect. 12 2
62 21.64 humidity 60 14400 > th dose independent rect. 23 9
63 21.71 humidity 60 14400 > th dose independent rect. 7 1
68 21.86 humidity 70 14400 < th dose dependent rect. 21 1
77 21.87 atmosphere 1010 90 < th dose dependent rect. 19 14
83 21.94 humidity 60 14400 < th dose independent rect. 6 1
85 21.94 humidity 60 14400 < th dose independent rect. 20 1
87 21.94 radiation 20 14400 > th dose independent rect. 17 1
138 21.94 humidity 60 14400 < th dose dependent rect. 6 1
142 21.94 radiation 20 14400 > th dose dependent rect. 17 1
195 21.98 humidity 80 14400 < th dose independent rect. 19 4
196 21.98 atmosphere 1010 90 < th dose dependent sin 10 NA
201 22.02 humidity 90 720 > th dose dependent rect. 20 1
202 22.02 atmosphere 1010 10 < th dose dependent rect. 19 13
213 22.07 atmosphere 1010 270 < th dose dependent rect. 21 10
214 22.08 humidity 80 14400 > th dose independent rect. 19 4
222 22.10 atmosphere 995 90 > th dose dependent sin 10 NA
235 22.15 humidity 80 14400 < th dose independent rect. 20 1
264 22.23 atmosphere 1005 720 < th dose independent rect. 20 1
286 22.27 atmosphere 1010 10 < th dose dependent rect. 19 11
309 22.33 humidity 90 14400 < th dose dependent rect. 20 2
361 22.43 temperature 25 1440 > th dose dependent rect. 20 11
365 22.44 atmosphere 1005 720 > th dose independent rect. 19 6
372 22.45 atmosphere 1005 720 < th dose independent rect. 19 6
377 22.46 atmosphere 1005 90 < th dose independent rect. 19 14
380 22.47 atmosphere 1005 10 < th dose independent rect. 19 13
393 22.49 humidity 90 270 > th dose dependent rect. 20 11
403 22.51 atmosphere 1010 10 < th dose dependent rect. 16 16
408 22.52 atmosphere 1015 720 < th dose dependent rect. 18 8
424 22.54 atmosphere 1005 90 > th dose independent sin 10 NA
439 22.55 humidity 90 720 > th dose dependent rect. 20 5
449 22.56 atmosphere 1005 10 < th dose dependent rect. 24 8
450 22.56 atmosphere 1000 270 > th dose dependent rect. 17 12
458 22.58 atmosphere 1005 720 < th dose independent rect. 20 3
460 22.58 atmosphere 1005 720 > th dose independent rect. 17 8
463 22.58 atmosphere 1005 270 < th dose independent rect. 19 11
469 22.58 atmosphere 1000 270 > th dose dependent rect. 20 10
475 22.59 atmosphere 1005 270 < th dose independent rect. 21 9
476 22.59 atmosphere 1005 90 > th dose independent rect. 21 10
480 22.59 temperature 25 1440 > th dose dependent rect. 20 6
521 22.62 humidity 80 14400 > th dose independent rect. 19 16
532 22.63 atmosphere 1005 720 > th dose independent rect. 20 3
557 22.64 temperature 25 720 > th dose dependent rect. 17 14
561 22.65 atmosphere 1005 10 < th dose independent sin 9 NA
562 22.65 temperature 25 4320 > th dose independent rect. 1 6
564 22.65 atmosphere 1005 270 > th dose independent rect. 19 12
565 22.65 humidity 50 14400 > th dose dependent rect. 20 1
597 22.67 wind 7 4320 > th dose dependent rect. 18 1
621 22.68 atmosphere 1010 10 < th dose dependent rect. 16 14
631 22.69 atmosphere 1005 270 > th dose dependent rect. 22 8
641 22.70 atmosphere 1005 270 < th dose independent sin 12 NA
647 22.70 radiation 10 14400 < th dose independent rect. 17 12
664 22.71 radiation 1 1440 > th dose independent rect. 9 1
665 22.71 radiation 10 14400 < th dose independent rect. 17 2
671 22.71 radiation 10 14400 < th dose independent rect. 17 8
703 22.72 humidity 50 14400 < th dose dependent rect. 17 18
720 22.73 humidity 90 14400 < th dose dependent rect. 20 15
725 22.74 wind 1 43200 > th dose independent rect. 6 1
729 22.74 temperature 25 4320 > th dose independent rect. 24 8
746 22.75 temperature 25 4320 > th dose independent rect. 1 1
755 22.75 humidity 90 270 > th dose dependent sin 10 NA
757 22.75 humidity 80 14400 < th dose dependent sin 12 NA
773 22.76 humidity 50 14400 > th dose dependent rect. 6 2
788 22.76 humidity 80 14400 < th dose dependent rect. 16 16
796 22.77 radiation 10 14400 < th dose independent rect. 17 14
800 22.77 humidity 80 14400 < th dose independent rect. 19 16
842 22.78 humidity 90 14400 < th dose dependent rect. 7 1
852 22.78 atmosphere 1000 10 > th dose dependent rect. 22 9
855 22.78 temperature 25 720 > th dose dependent rect. 17 11
866 22.79 atmosphere 1005 720 > th dose independent rect. 20 1
871 22.79 atmosphere 1005 10 > th dose independent rect. 22 10
895 22.80 humidity 80 14400 > th dose independent sin 12 NA
896 22.80 humidity 80 4320 > th dose independent rect. 23 1
897 22.80 humidity 70 14400 < th dose independent rect. 16 1
941 22.81 humidity 80 14400 > th dose dependent rect. 7 1
962 22.82 temperature 30 1440 > th dose independent rect. 10 5
975 22.82 temperature 25 4320 > th dose dependent rect. 24 7
980 22.82 humidity 80 14400 < th dose dependent rect. 16 12