BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0737800 Os03g0737800|AK103066
         (759 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os03g0737800  Conserved hypothetical protein                     1385   0.0  

>Os03g0737800 Conserved hypothetical protein
          Length = 759

 Score = 1385 bits (3584), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 679/711 (95%), Positives = 679/711 (95%)

Query: 49  LDTINSASFDPDVYMNVLVQQSNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISAT 108
           LDTINSASFDPDVYMNVLVQQSNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISAT
Sbjct: 49  LDTINSASFDPDVYMNVLVQQSNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISAT 108

Query: 109 DTIKRMKTNIVGMEANMEQLLSKITSVQSRSDTVNTSLFDKRENIEKLHRTRNLLRKVQF 168
           DTIKRMKTNIVGMEANMEQLLSKITSVQSRSDTVNTSLFDKRENIEKLHRTRNLLRKVQF
Sbjct: 109 DTIKRMKTNIVGMEANMEQLLSKITSVQSRSDTVNTSLFDKRENIEKLHRTRNLLRKVQF 168

Query: 169 IYDLPTRLNKCIKTEAYADAVRFFTGAKPIFEAYGDTSFHDCKKASEEAIDLVTQHLKTK 228
           IYDLPTRLNKCIKTEAYADAVRFFTGAKPIFEAYGDTSFHDCKKASEEAIDLVTQHLKTK
Sbjct: 169 IYDLPTRLNKCIKTEAYADAVRFFTGAKPIFEAYGDTSFHDCKKASEEAIDLVTQHLKTK 228

Query: 229 LYSDSEPIESRAEAVVLLKQLNFPVDSLKSNLLEKLEDCLLNFQKEPTQASIGDISKTFR 288
           LYSDSEPIESRAEAVVLLKQLNFPVDSLKSNLLEKLEDCLLNFQKEPTQASIGDISKTFR
Sbjct: 229 LYSDSEPIESRAEAVVLLKQLNFPVDSLKSNLLEKLEDCLLNFQKEPTQASIGDISKTFR 288

Query: 289 AYLIIFPDSEKRLIELAQALFSNRYETVRENLRKRIPSTYLLAMLRSLWEDATAIDEVIP 348
           AYLIIFPDSEKRLIELAQALFSNRYETVRENLRKRIPSTYLLAMLRSLWEDATAIDEVIP
Sbjct: 289 AYLIIFPDSEKRLIELAQALFSNRYETVRENLRKRIPSTYLLAMLRSLWEDATAIDEVIP 348

Query: 349 EAALPAFSLETTRDIIRQHIATAFLHLQSEISDVLARTPSTSNGKLEESQLQTAMETSKV 408
           EAALPAFSLETTRDIIRQHIATAFLHLQSEISDVLARTPSTSNGKLEESQLQTAMETSKV
Sbjct: 349 EAALPAFSLETTRDIIRQHIATAFLHLQSEISDVLARTPSTSNGKLEESQLQTAMETSKV 408

Query: 409 KVLQGCIDLLQEFHHLIDGNTELLVKLRDLVIDWVQEGFQDFFQKLDGHFHMLSGRSKSP 468
           KVLQGCIDLLQEFHHLIDGNTELLVKLRDLVIDWVQEGFQDFFQKLDGHFHMLSGRSKSP
Sbjct: 409 KVLQGCIDLLQEFHHLIDGNTELLVKLRDLVIDWVQEGFQDFFQKLDGHFHMLSGRSKSP 468

Query: 469 SQEMESVQIDKVPTALVLMLAQLCVFIEQTAIPKVTEELASSFSGGGARSYEYGPPFVPG 528
           SQEMESVQIDKVPTALVLMLAQLCVFIEQTAIPKVTEELASSFSGGGARSYEYGPPFVPG
Sbjct: 469 SQEMESVQIDKVPTALVLMLAQLCVFIEQTAIPKVTEELASSFSGGGARSYEYGPPFVPG 528

Query: 529 EICRLYRSSGEKFLHHYINMKTQKISKLLNKRFTTPVWIKHKEPREVNMFVDLLLLEFNG 588
           EICRLYRSSGEKFLHHYINMKTQKISKLLNKRFTTPVWIKHKEPREVNMFVDLLLLEFNG
Sbjct: 529 EICRLYRSSGEKFLHHYINMKTQKISKLLNKRFTTPVWIKHKEPREVNMFVDLLLLEFNG 588

Query: 589 VVSEVKQVLPGLIXXXXXXXXXXXXXXXXXNPMREDMLNRSNTHRARSQFLENHLAKLFE 648
           VVSEVKQVLPGLI                 NPMREDMLNRSNTHRARSQFLENHLAKLFE
Sbjct: 589 VVSEVKQVLPGLIRRHRHSDSTGSTTSSRSNPMREDMLNRSNTHRARSQFLENHLAKLFE 648

Query: 649 QKMEIFTKVEYTQESVISAVLKLCLKSLQEFVRLQTFNRSGFQQIQLDMEFLKTSLKEFV 708
           QKMEIFTKVEYTQESVISAVLKLCLKSLQEFVRLQTFNRSGFQQIQLDMEFLKTSLKEFV
Sbjct: 649 QKMEIFTKVEYTQESVISAVLKLCLKSLQEFVRLQTFNRSGFQQIQLDMEFLKTSLKEFV 708

Query: 709 DDEAAISFLLKEVNNAAHERCXXXXXXXXXXXXXXXSAKLAKIKEQSPNMQ 759
           DDEAAISFLLKEVNNAAHERC               SAKLAKIKEQSPNMQ
Sbjct: 709 DDEAAISFLLKEVNNAAHERCLDPIPLEPPILDKLISAKLAKIKEQSPNMQ 759



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.133    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,490,649
Number of extensions: 719577
Number of successful extensions: 2122
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2122
Number of HSP's successfully gapped: 1
Length of query: 759
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 651
Effective length of database: 11,396,689
Effective search space: 7419244539
Effective search space used: 7419244539
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 160 (66.2 bits)