Os03g0732200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0732200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.22 | 0.391 | 11.6 | -0.879 | 1.29 | -1.31 | 0.0153 | -0.269 | 0.106 | 21.6 | 24.55 | 25 | -- | -- |
| 69.23 | 0.388 | 11.6 | -0.861 | 1.28 | -1.33 | 0.043 | -- | 0.109 | 21.6 | 24.57 | 19 | -- | -- |
| 69.21 | 0.387 | 11.6 | -0.88 | 1.29 | -1.31 | -- | -0.275 | 0.105 | 21.6 | 24.56 | 23 | -- | -- |
| 69.22 | 0.387 | 11.6 | -0.847 | 1.28 | -1.33 | -- | -- | 0.115 | 21.6 | 24.59 | 19 | -- | -- |
| 155.18 | 0.583 | 11.6 | -0.787 | -- | -1.73 | -- | -0.53 | 0.236 | -- | 21.42 | 7 | -- | -- |
| 95.44 | 0.458 | 11.7 | -1.04 | 1.46 | -- | 0.41 | -- | -0.0202 | 23 | -- | -- | -- | -- |
| 96.14 | 0.459 | 11.7 | -1.06 | 1.46 | -- | -- | -- | -0.0212 | 23 | -- | -- | -- | -- |
| 155.43 | 0.583 | 11.6 | -0.7 | -- | -1.76 | -- | -- | 0.262 | -- | 21.42 | 7 | -- | -- |
| 85.39 | 0.43 | 11.6 | -- | 1.24 | -1.55 | -- | -- | 0.304 | 21.3 | 22.63 | 18 | -- | -- |
| 228.84 | 0.707 | 11.6 | -1.03 | -- | -- | -- | -- | -0.0104 | -- | -- | -- | -- | -- |
| 125.68 | 0.524 | 11.6 | -- | 1.45 | -- | -- | -- | 0.0967 | 22.9 | -- | -- | -- | -- |
| 167.68 | 0.603 | 11.5 | -- | -- | -1.89 | -- | -- | 0.363 | -- | 21.08 | 5 | -- | -- |
| 256.62 | 0.748 | 11.6 | -- | -- | -- | -- | -- | 0.103 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 14 |
| 2 | 62.94 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 16 |
| 4 | 63.02 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 11 |
| 10 | 63.54 | temperature | 20 | 90 | > th | dose dependent | rect. | 4 | 17 |
| 44 | 64.89 | temperature | 10 | 270 | > th | dose dependent | sin | 23 | NA |
| 50 | 65.20 | temperature | 10 | 30 | > th | dose dependent | sin | 20 | NA |
| 87 | 66.00 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 21 |
| 90 | 66.01 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 20 |
| 114 | 66.30 | temperature | 30 | 270 | < th | dose independent | rect. | 6 | 11 |
| 147 | 66.66 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 166 | 66.80 | temperature | 10 | 720 | > th | dose dependent | sin | 3 | NA |
| 191 | 67.04 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 20 |
| 208 | 67.30 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 12 |
| 338 | 68.60 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 10 |
| 341 | 68.61 | temperature | 10 | 720 | > th | dose dependent | rect. | 9 | 6 |
| 345 | 68.64 | temperature | 25 | 10 | > th | dose dependent | rect. | 12 | 12 |
| 588 | 69.35 | temperature | 30 | 720 | < th | dose independent | rect. | 6 | 6 |
| 623 | 69.45 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 22 |
| 668 | 69.55 | temperature | 25 | 30 | > th | dose dependent | no | NA | NA |
| 729 | 69.73 | temperature | 25 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 749 | 69.79 | temperature | 25 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 768 | 69.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 12 |
| 821 | 70.01 | temperature | 30 | 270 | < th | dose independent | sin | 23 | NA |
| 946 | 70.33 | temperature | 25 | 30 | > th | dose dependent | rect. | 15 | 23 |