Os03g0731500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Major surface glycoprotein-like.
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Os03g0731500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Major surface glycoprotein-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.51 | 0.185 | 12.4 | 0.661 | 0.506 | -1.13 | -0.519 | 1.18 | 0.308 | 12.3 | 11.29 | 365 | -- | -- |
| 16.44 | 0.189 | 12.4 | 0.472 | 0.497 | -1.08 | -0.511 | -- | 0.258 | 12.2 | 9.024 | 391 | -- | -- |
| 16.48 | 0.189 | 12.4 | 0.648 | 0.433 | -1.08 | -- | 1.18 | 0.305 | 12 | 10.88 | 473 | -- | -- |
| 17.37 | 0.194 | 12.5 | 0.449 | 0.5 | -1.08 | -- | -- | 0.252 | 12.2 | 9.838 | 375 | -- | -- |
| 23.22 | 0.224 | 12.4 | 0.76 | -- | -1.24 | -- | 1.31 | 0.345 | -- | 9.504 | 752 | -- | -- |
| 29.59 | 0.255 | 12.5 | 0.229 | 0.543 | -- | -0.351 | -- | 0.0958 | 10 | -- | -- | -- | -- |
| 30.06 | 0.257 | 12.5 | 0.214 | 0.546 | -- | -- | -- | 0.0946 | 9.93 | -- | -- | -- | -- |
| 24.6 | 0.231 | 12.5 | 0.517 | -- | -1.21 | -- | -- | 0.28 | -- | 14.7 | 744 | -- | -- |
| 22.14 | 0.219 | 12.5 | -- | 0.488 | -0.866 | -- | -- | 0.176 | 11.6 | 10.55 | 380 | -- | -- |
| 47.96 | 0.324 | 12.5 | 0.208 | -- | -- | -- | -- | 0.0945 | -- | -- | -- | -- | -- |
| 31.27 | 0.262 | 12.5 | -- | 0.545 | -- | -- | -- | 0.0707 | 9.9 | -- | -- | -- | -- |
| 30.95 | 0.259 | 12.5 | -- | -- | -1.02 | -- | -- | 0.198 | -- | 13.97 | 716 | -- | -- |
| 49.1 | 0.327 | 12.5 | -- | -- | -- | -- | -- | 0.0714 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.54 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 14 | 15.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 20 | 15.49 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 18 |
| 25 | 15.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 31 | 15.71 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 37 | 15.81 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 41 | 15.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 18 |
| 69 | 16.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 100 | 16.20 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 22 |
| 103 | 16.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 166 | 16.42 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 194 | 16.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 280 | 16.67 | temperature | 10 | 720 | > th | dose dependent | sin | 4 | NA |
| 291 | 16.69 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 306 | 16.74 | temperature | 30 | 720 | < th | dose dependent | sin | 8 | NA |
| 342 | 16.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 344 | 16.82 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 18 |
| 421 | 16.96 | temperature | 10 | 1440 | > th | dose dependent | sin | 9 | NA |
| 450 | 16.99 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 12 |
| 461 | 17.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 498 | 17.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 6 |
| 520 | 17.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 4 |
| 549 | 17.04 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 21 |
| 565 | 17.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 8 |
| 582 | 17.07 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 679 | 17.11 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 697 | 17.12 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 7 |
| 749 | 17.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 856 | 17.18 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 3 |