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Os03g0715500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : WD40-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.015) R2 : 0.0984
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.223 (0.0316) R2dN8 : 0.127 R2N8 : 0.0984
σ : 0.283
deviance : 36.65
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.99 0.205 10.2 0.111 0.466 0.72 -0.148 0.446 0.154 7.18 9.588 12 -- --
19.15 0.204 10.2 0.0482 0.467 0.733 -0.142 -- 0.137 7.17 11.7 18 -- --
19.04 0.203 10.2 0.105 0.469 0.727 -- 0.436 0.153 7.18 10.3 18 -- --
19.2 0.204 10.2 0.0454 0.467 0.734 -- -- 0.137 7.2 11.28 19 -- --
30.14 0.257 10.2 0.122 -- 0.609 -- 0.32 0.174 -- 10.3 18 -- --
24.29 0.231 10.2 0.192 0.446 -- -0.0642 -- 0.241 8.92 -- -- -- --
24.3 0.231 10.2 0.19 0.446 -- -- -- 0.241 8.95 -- -- -- --
30.21 0.257 10.2 0.0781 -- 0.622 -- -- 0.162 -- 14.4 10 -- --
19.25 0.204 10.2 -- 0.47 0.757 -- -- 0.129 7.14 10.95 19 -- --
35.7 0.279 10.2 0.189 -- -- -- -- 0.244 -- -- -- -- --
25.25 0.235 10.2 -- 0.447 -- -- -- 0.22 8.91 -- -- -- --
30.36 0.257 10.2 -- -- 0.647 -- -- 0.15 -- 12.16 6 -- --
36.65 0.283 10.2 -- -- -- -- -- 0.223 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.45 temperature 10 30 > th dose dependent rect. 23 23
5 17.94 temperature 10 720 > th dose dependent rect. 20 20
14 18.30 temperature 10 720 > th dose dependent rect. 23 17
27 18.52 temperature 10 720 > th dose dependent rect. 1 15
48 18.71 temperature 10 270 > th dose dependent rect. 1 23
69 18.84 temperature 30 270 < th dose dependent rect. 22 22
75 18.88 temperature 30 10 < th dose dependent rect. 7 23
76 18.88 temperature 30 10 < th dose dependent rect. 17 23
87 18.92 temperature 15 270 > th dose dependent rect. 10 23
98 18.94 temperature 30 10 < th dose dependent rect. 9 23
108 18.98 temperature 30 10 < th dose dependent rect. 17 21
112 19.00 temperature 15 720 > th dose dependent sin 5 NA
120 19.01 temperature 10 10 > th dose dependent no NA NA
127 19.02 temperature 30 10 < th dose dependent rect. 15 23
136 19.05 temperature 30 30 < th dose dependent rect. 11 23
145 19.07 temperature 30 10 < th dose dependent no NA NA
151 19.07 temperature 30 30 < th dose dependent rect. 13 23
184 19.15 temperature 10 720 > th dose dependent rect. 12 20
187 19.15 temperature 15 30 > th dose dependent rect. 1 23
189 19.16 temperature 30 720 < th dose dependent rect. 24 19
199 19.18 temperature 20 10 > th dose dependent rect. 10 23
200 19.18 temperature 15 10 > th dose dependent rect. 21 23
212 19.20 temperature 10 720 > th dose dependent rect. 12 23
213 19.20 temperature 30 270 < th dose dependent rect. 5 23
224 19.22 temperature 30 720 < th dose dependent rect. 22 15
257 19.27 temperature 15 10 > th dose dependent rect. 3 23
293 19.32 temperature 30 10 < th dose dependent rect. 1 23
321 19.35 temperature 20 10 > th dose dependent rect. 23 21
331 19.36 temperature 25 1440 < th dose dependent rect. 21 1
338 19.36 temperature 30 10 < th dose dependent rect. 9 21
363 19.39 temperature 10 270 > th dose dependent sin 0 NA
365 19.39 temperature 20 1440 > th dose dependent rect. 24 1
417 19.43 temperature 30 720 < th dose dependent sin 6 NA
418 19.43 temperature 10 1440 > th dose dependent rect. 23 3
427 19.44 temperature 30 1440 < th dose dependent rect. 23 3
462 19.46 temperature 30 10 < th dose dependent rect. 3 23
468 19.47 temperature 25 1440 < th dose dependent rect. 20 6
477 19.47 temperature 20 90 > th dose dependent rect. 12 23
505 19.49 temperature 30 720 < th dose dependent rect. 16 20
507 19.49 temperature 20 10 > th dose dependent rect. 1 21
518 19.50 temperature 30 1440 < th dose dependent rect. 1 1
543 19.51 temperature 15 720 > th dose dependent rect. 23 9
565 19.52 temperature 10 90 > th dose dependent sin 21 NA
609 19.54 temperature 30 30 < th dose dependent sin 20 NA
612 19.54 temperature 15 720 > th dose dependent rect. 3 5
618 19.54 temperature 20 30 > th dose dependent rect. 4 18
659 19.56 temperature 30 30 < th dose dependent rect. 9 12
768 19.60 temperature 30 270 < th dose dependent rect. 7 13
813 19.62 temperature 25 1440 < th dose dependent sin 13 NA
826 19.62 temperature 15 270 > th dose dependent rect. 10 14
835 19.63 temperature 25 4320 < th dose independent rect. 21 7
886 19.64 temperature 30 90 < th dose dependent rect. 9 14
976 19.66 temperature 30 30 < th dose dependent rect. 19 23