BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0715500 Os03g0715500|AK071327
         (984 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G36630.1  | chr4:17272088-17276524 REVERSE LENGTH=1001        1080   0.0  
AT1G22860.1  | chr1:8083400-8088867 FORWARD LENGTH=962             60   5e-09

>AT4G36630.1 | chr4:17272088-17276524 REVERSE LENGTH=1001
          Length = 1000

 Score = 1080 bits (2793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/1003 (54%), Positives = 720/1003 (71%), Gaps = 22/1003 (2%)

Query: 1    MVHSAYDAVELVSGVPGDIVAVAAYAGRLLVAGKDGSLRIYASPGHAGGGIPRD---GPY 57
            MVH+AYD+ +L+   P  I AV +Y  +L     DGSLRIY SP  +    P +     Y
Sbjct: 1    MVHNAYDSFQLLKDCPARIDAVESYGSKLFAGCYDGSLRIY-SPPESSASDPSELHQETY 59

Query: 58   ALERQQPSLWRRGTPLAMEVSAGRELLLSLAECVNLHRLPGLETVAVIGKTKGANLFAWD 117
             LE+      ++   +AMEV A RELLLSL+E +  H LP LETVAVI K KGAN ++WD
Sbjct: 60   VLEKTVAGFSKKPI-VAMEVLASRELLLSLSESIAFHGLPNLETVAVITKAKGANAYSWD 118

Query: 118  DRRGLLAVGRWKRLTIFRLDSGREFVEVKEFGVPDTVKSMAWCGDNICLGIRKEYMIINS 177
            DRRG L   R KR+ +F+ D G  FVEV+++GVPDTVKS++WCG+NICLGI+KEY+I+N+
Sbjct: 119  DRRGFLCFSRQKRVCVFKHDGGGGFVEVRDYGVPDTVKSISWCGENICLGIKKEYVILNT 178

Query: 178  MTGALTEVFSSGRNAPPLVVALPTGELLLGKDNIGVFVDQNGKLIQDGRIIWSDTPASVA 237
              G L+EVF SGR APPLV++LP+GEL+LGK+NIGVFVDQNGKL+Q  RI WS+ P S+ 
Sbjct: 179  ANGTLSEVFPSGRVAPPLVISLPSGELILGKENIGVFVDQNGKLLQTERICWSEAPTSIV 238

Query: 238  IHRPYAVARLPRHVEIRSLRAPNALVQTVVLRDVQKLVETENCILAVLARSVYGLLPVPI 297
            I  PYA+A LPR VE+R LR+P  L+QT+VL+++++LV++ N ++  L  SVY L PV I
Sbjct: 239  IQNPYAIALLPRRVEVRLLRSPYPLIQTIVLQNIRRLVKSNNAVIVGLDNSVYVLFPVSI 298

Query: 298  GAQIVQLTASGEFEEALALCKLLPPEDSNLRAAKESSIHIRYGHFLFDNGSYEEAMEQFS 357
            GAQIVQLTASG FEEALALCK+LPP++S+LRAAKESSIH R+ H+LF+NGSYEEAME F 
Sbjct: 299  GAQIVQLTASGNFEEALALCKVLPPDESSLRAAKESSIHTRFAHYLFENGSYEEAMEHFL 358

Query: 358  DSHVDITYVLSLYPSLVLPQTHIIGEHDRLQDL----PELARESSDVTDDMEPYSLQLH- 412
             S VDIT+VLS+YPS++LP+T II + D++ D+      L+R SS ++DDME  S +   
Sbjct: 359  ASQVDITHVLSMYPSIILPKTTIIPQPDKMVDISGDEASLSRGSSGISDDMESSSPRYFL 418

Query: 413  ESDDKSPLEIKKMSHNALIALVKYLHKKRNGIIERXXXXXXXXXXSGAVHHSSILSESYR 472
            ES+D + LE KKMSHN L+AL+KYL K+R  +IE+          S AV  +   ++S +
Sbjct: 419  ESEDNADLESKKMSHNTLMALIKYLLKRRPAVIEKATSEGTEEVISDAVGKTYGANDSSK 478

Query: 473  SKKPNKKRAQTHTSSIAREMATVLDTSLLQALILTGQSSGAIELLKGLNYCDLKICKEFL 532
            SKK +K R     +S AREMA +LDT+LLQAL+ TGQS  AIELLKG+NY D+KIC+E L
Sbjct: 479  SKKSSKGRGMIPLNSGAREMAAILDTALLQALLHTGQSGAAIELLKGVNYSDVKICEEIL 538

Query: 533  EERSDYMVLLELYKSNEMHREALQLLNQLVEESKAEMGKNDFNKKFNPQMIIEYLRPLCR 592
             +  +Y  LLEL+KSN MH EAL+LLNQL +ESK    + D  + F+P++IIEYL+PLCR
Sbjct: 539  MKSKNYSALLELFKSNSMHHEALKLLNQLADESKTNQSQTDVTQIFSPELIIEYLKPLCR 598

Query: 593  SDPMLVLESSLYVLERNPSDTIELFLSENVPADLVNSYLKQHAPNLQSTYLELMLSMSVS 652
            +DPMLVLE S+ VLE  P+ TI+LFLS N+ ADLVNSYLKQHAPN+Q  YLELM++M+ +
Sbjct: 599  TDPMLVLEYSMLVLESCPTQTIDLFLSGNISADLVNSYLKQHAPNMQGRYLELMMAMNDT 658

Query: 653  GINPNLQNELVQLYLSEVLDWHKILKEEGNWTEKTYSPTRKKLITTLENNSGYNTDILLK 712
             ++ NLQNE+VQ+YLSEVLD +     +  W EK + P RKKL++ LE+ SGY+   LLK
Sbjct: 659  AVSGNLQNEMVQIYLSEVLDLYAAKSAQQKWDEKDHPPERKKLLSALESISGYSPQPLLK 718

Query: 713  RLPQDALFEERAILYGKINQHLRALSLYVHKLQMPERAVAYCDRVYEEGAQQPS---KSN 769
            RLP+DAL+EERA++ GK+NQH  ALS+YVHKL  P+ A+AYCDR+YE     PS    SN
Sbjct: 719  RLPRDALYEERAVILGKMNQHELALSIYVHKLHAPDLALAYCDRIYESVTYLPSGKPSSN 778

Query: 770  IYFNLLQIYLNPRKAEKEFEQKIVPVAS-QYPGIQKV------TKVRGARMGKKVVEIEG 822
            IY  +LQIYLNP+K+ K+F ++IV + S +     K+      +K +G R  KK+V IEG
Sbjct: 779  IYLTVLQIYLNPKKSAKDFAKRIVALGSFESSDTTKMMDSVLSSKAKGGR-SKKIVAIEG 837

Query: 823  ADDVRFXXXXXXXXXXXXXXXXX-XXXXXXPIMLNEALELLSQRWDRINGAQALRLLPRD 881
            A+D+R                          +M++E L+LLSQRW+RINGAQAL+LLPR+
Sbjct: 838  AEDMRVGLSSSTDSGRSDVDTEEPLEEGDSTVMISEVLDLLSQRWERINGAQALKLLPRE 897

Query: 882  TKLQDLVLFLEPLLRNSSEHRRNYMVIKNLIFRANLQVKEDLYKRRQAVLKIDGDSMCSL 941
            TKL +L+ FL PLLRNSSE  RN+ VIK+L    NLQVKE+LYK R+ V ++  +SMCSL
Sbjct: 898  TKLHNLLPFLAPLLRNSSEAHRNFSVIKSLRQSENLQVKEELYKHRKGVAQVTSESMCSL 957

Query: 942  CHKRIANSAFAIYPNGQTLVHFVCFRESQQIKAVRGVNSVKRR 984
            C+K+I  S FA+YPNG+TLVHFVCFR+SQ +KAV      +RR
Sbjct: 958  CNKKIGTSVFAVYPNGKTLVHFVCFRDSQGMKAVSKTTHGRRR 1000



>AT1G22860.1 | chr1:8083400-8088867 FORWARD LENGTH=962
          Length = 961

 Score = 60.5 bits (145), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 26/248 (10%)

Query: 142 FVEVKEFGVPDTVKSMAWCGDNICLGIRKEYMIINSMTGALTEVFS-SGRNAPPLVVAL- 199
           FV +KE      +K++ W  D +  G  K Y +I+ +TG    +F+    + PPL+  L 
Sbjct: 200 FVVLKEILGIGGIKTLVWLDDYVIAGTVKGYSLISCVTGLSGVIFTLPDVSGPPLLKLLC 259

Query: 200 PTGELLLGKDNIGVFVDQNGKLIQDGRIIWSDTPASVAIHRPYAVARLPRHVEIRSLRAP 259
              ++LL  DN+GV VD NG+ I  G +++   P SV     Y V      +EI   +  
Sbjct: 260 KEWKVLLLVDNVGVVVDTNGQPI-GGSLVFRRRPDSVGELSFYLVTVGDGKMEIHQ-KKS 317

Query: 260 NALVQTV---------VLRDVQKLVETENCILAVLARSVYGLLPVPIGAQIVQLTASGEF 310
            A VQ+V          L    +  +    ++  L++ ++    VP   QI  L     +
Sbjct: 318 GACVQSVSFGPQGCGPSLLAADEAGDGNLLVVTTLSKLIF-YRRVPYEEQIKDLLRKKRY 376

Query: 311 EEALALCKLLPPEDSNLRAAKE--SSIHIRYGHFLFDNGSYEEAMEQFSDSHVDITYVLS 368
            E ++L + L   DS    +K+  S +H + G+ L  +  +EEA+ QF  S         
Sbjct: 377 RETISLVEEL---DSQGEISKDMLSFLHAQIGYLLLFDLRFEEAVNQFLKSE-------K 426

Query: 369 LYPSLVLP 376
           + PS V P
Sbjct: 427 MEPSEVFP 434




 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 1/124 (0%)

Query: 854 MLNEALELLSQRWDRINGAQALRLLPRDTKLQDLVLFLEPLLRNSSEHRRNYMVIKNLIF 913
           M   A+ LL    + ++  Q L  L  D  L+     +  +LR    H R   ++ N+  
Sbjct: 822 MFKAAVRLLHNHGESLDPLQVLDKLSPDMPLKLASDTILRMLRARVHHHRQGQIVHNISR 881

Query: 914 RANLQVKEDLYKRRQAVLKIDGDSMCSLCHKRIANSAFAIYPNGQTLVHFVCFRESQQIK 973
             ++  +    + R   ++I+ +S+C  C+ R+    FA+YP+  T+V + C+R   + K
Sbjct: 882 ALDVDSRLARLEERSRHMQINDESLCDSCYARLGTKLFAMYPD-DTIVCYKCYRRLGESK 940

Query: 974 AVRG 977
           +V G
Sbjct: 941 SVTG 944



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.135    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 19,966,576
Number of extensions: 835465
Number of successful extensions: 2334
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 2327
Number of HSP's successfully gapped: 3
Length of query: 984
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 876
Effective length of database: 8,145,641
Effective search space: 7135581516
Effective search space used: 7135581516
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 117 (49.7 bits)