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Os03g0713400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-75KD) (CI-75KD) (76 kDa mitochondrial complex I subunit).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8.65 | 0.138 | 12.8 | 0.308 | 0.207 | -0.058 | 0.203 | -1.58 | -0.000499 | 11.5 | 29.2 | 3465 | -- | -- |
| 9.1 | 0.141 | 12.8 | 0.0167 | 0.217 | -0.238 | 0.0932 | -- | -0.0548 | 11.3 | 29.6 | 3624 | -- | -- |
| 8.81 | 0.138 | 12.8 | 0.3 | 0.206 | -0.0692 | -- | -1.45 | -0.00508 | 11.3 | 29 | 3409 | -- | -- |
| 9.16 | 0.141 | 12.8 | -0.0168 | 0.216 | -0.229 | -- | -- | -0.0592 | 11.2 | 29.44 | 3637 | -- | -- |
| 11.38 | 0.157 | 12.8 | 0.331 | -- | -0.0183 | -- | -1.54 | -0.000296 | -- | 28.91 | 3303 | -- | -- |
| 10.6 | 0.153 | 12.8 | 0.0359 | 0.193 | -- | 0.153 | -- | -0.0613 | 11.3 | -- | -- | -- | -- |
| 10.69 | 0.153 | 12.8 | 0.0418 | 0.192 | -- | -- | -- | -0.0609 | 11.1 | -- | -- | -- | -- |
| 11.81 | 0.16 | 12.8 | -0.0183 | -- | -0.184 | -- | -- | -0.0693 | -- | 29 | 4457 | -- | -- |
| 9.16 | 0.141 | 12.8 | -- | 0.215 | -0.226 | -- | -- | -0.0573 | 11.2 | 29.45 | 3623 | -- | -- |
| 13 | 0.169 | 12.8 | 0.0373 | -- | -- | -- | -- | -0.0625 | -- | -- | -- | -- | -- |
| 10.74 | 0.153 | 12.8 | -- | 0.192 | -- | -- | -- | -0.0656 | 11.1 | -- | -- | -- | -- |
| 11.81 | 0.16 | 12.8 | -- | -- | -0.182 | -- | -- | -0.0678 | -- | 29 | 4510 | -- | -- |
| 13.04 | 0.169 | 12.8 | -- | -- | -- | -- | -- | -0.0667 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 7.93 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 3 | 8.04 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 10 | 8.06 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 6 |
| 15 | 8.09 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 16 | 8.09 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 17 | 8.09 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 20 | 8.09 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 61 | 8.20 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 67 | 8.21 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 73 | 8.21 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 93 | 8.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 99 | 8.26 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 2 |
| 104 | 8.27 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 112 | 8.28 | temperature | 20.0 | 14400 | > th | dose independent | sin | 16 | NA |
| 119 | 8.28 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 121 | 8.28 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 138 | 8.30 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 167 | 8.33 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 9 |
| 205 | 8.36 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 206 | 8.36 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 217 | 8.36 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 219 | 8.37 | temperature | 20.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 230 | 8.38 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 259 | 8.39 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 260 | 8.39 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 261 | 8.39 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 265 | 8.40 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 266 | 8.40 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 276 | 8.40 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 322 | 8.42 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 5 |
| 330 | 8.43 | wind | 5.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 426 | 8.46 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 450 | 8.46 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 452 | 8.47 | wind | 5.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 455 | 8.47 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 512 | 8.48 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 517 | 8.49 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 535 | 8.49 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 572 | 8.50 | wind | 5.0 | 43200 | < th | dose independent | rect. | 17 | 17 |
| 577 | 8.50 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 18 | NA |
| 590 | 8.51 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 592 | 8.51 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 596 | 8.51 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 23 | 5 |
| 597 | 8.51 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 603 | 8.51 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 20 | 8 |
| 604 | 8.51 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 20 | 8 |
| 608 | 8.51 | wind | 5.0 | 43200 | > th | dose independent | rect. | 17 | 17 |
| 623 | 8.51 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 19 | 5 |
| 628 | 8.51 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 8 |
| 668 | 8.52 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 731 | 8.53 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 18 | NA |
| 757 | 8.53 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 18 | 15 |
| 764 | 8.54 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 779 | 8.54 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 782 | 8.54 | wind | 5.0 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 801 | 8.54 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 854 | 8.55 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 906 | 8.56 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 923 | 8.56 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 967 | 8.57 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 4 |
