BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0713400 Os03g0713400|AK071307
         (747 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G37510.2  | chr5:14897490-14900447 FORWARD LENGTH=749         1124   0.0  

>AT5G37510.2 | chr5:14897490-14900447 FORWARD LENGTH=749
          Length = 748

 Score = 1124 bits (2908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/686 (78%), Positives = 592/686 (86%), Gaps = 1/686 (0%)

Query: 62  GGARVELPSNPEDALEVFVDGHAVRIPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRM 121
           GGARV   SNPEDA+EVFVDG+AV++PKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRM
Sbjct: 61  GGARVHF-SNPEDAIEVFVDGYAVKVPKGFTVLQACEVAGVDIPRFCYHSRLSIAGNCRM 119

Query: 122 CLVEVEKSPKPVASCAMPALPGMKIKTNTPVAKKAREGVMEFLLMNHPLDCPICDQGGEC 181
           CLVEVEKSPKPVASCAMPALPGMKIKT+TP+AKKAREGVMEFLLMNHPLDCPICDQGGEC
Sbjct: 120 CLVEVEKSPKPVASCAMPALPGMKIKTDTPIAKKAREGVMEFLLMNHPLDCPICDQGGEC 179

Query: 182 DLQDQSMAFGADRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLGM 241
           DLQDQSMAFG+DRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLG+
Sbjct: 180 DLQDQSMAFGSDRGRFTEMKRSVVDKNLGPLVKTVMTRCIQCTRCVRFASEVAGVQDLGI 239

Query: 242 LGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKGTETIDVTDAV 301
           LGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELK TETIDV+DAV
Sbjct: 240 LGRGSGEEIGTYVEKLMTSELSGNVIDICPVGALTSKPFAFKARNWELKATETIDVSDAV 299

Query: 302 GSNIRVDSRGPEVMRIVPRLNEDINEEWISDKTRFCYDGLKRQRLNDPMIRGTDGRFKAV 361
           GSNIRVDSRGPEVMRI+PRLNEDINEEWISDKTRFCYDGLKRQRL+DPMIR +DGRFKAV
Sbjct: 300 GSNIRVDSRGPEVMRIIPRLNEDINEEWISDKTRFCYDGLKRQRLSDPMIRDSDGRFKAV 359

Query: 362 TWRDXXXXXXXXXXXXKPEEITGVAGKLSDAESMMALKDFVNKMGSDKVLCEGNGPSPPA 421
           +WRD            KP+EI GVAG+LSDAESMM LKDFVN+MGSD V CEG      A
Sbjct: 360 SWRDALAVVGDIIHQVKPDEIVGVAGQLSDAESMMVLKDFVNRMGSDNVWCEGTAAGVDA 419

Query: 422 DLRSNYLMNTSIAGLEKADVFLLVGTQPRVEAAMVNARIRKTVRATQAKVAYIGPPTDFN 481
           DLR +YLMNTSI+GLE AD+FLL+GTQPRVEAAMVNARI KTVRA+ AKV Y+GPP +FN
Sbjct: 420 DLRYSYLMNTSISGLENADLFLLIGTQPRVEAAMVNARICKTVRASNAKVGYVGPPAEFN 479

Query: 482 YDHEHLGTGPQTLVEIAEGRHPFCSTLQSAKNPVIIAGAGLFDREDQDALFSTIETVAKK 541
           YD +HLGTGP TL EIAEGRHPFC+ L++AKNP II GAGLF+R D++A+ S++E++A+ 
Sbjct: 480 YDCKHLGTGPDTLKEIAEGRHPFCTALKNAKNPAIIVGAGLFNRTDKNAILSSVESIAQA 539

Query: 542 FNVVRPDWNGLNVXXXXXXXXXXXXXXXXXNPTESIKSTKFLYLMGAXXXXXXXXXXXAF 601
            NVVRPDWNGLN                     ++++S KF+YLMGA           AF
Sbjct: 540 NNVVRPDWNGLNFLLQYAAQAAALDLGLIQQSAKALESAKFVYLMGADDVNVDKIPKDAF 599

Query: 602 VVYQGHHGDKAVYRANVILPSSAFSEKEGTYENTEGCTQWTIPAVPTVGDARDDWKILRA 661
           VVYQGHHGDKAVYRANVILP+SAF+EKEGTYENTEG TQ T+PAVPTVGDARDDWKI+RA
Sbjct: 600 VVYQGHHGDKAVYRANVILPASAFTEKEGTYENTEGFTQQTVPAVPTVGDARDDWKIVRA 659

Query: 662 LSEVAGAQLPYDSLSGVRDRISMVAPNLVHVDEREPCTISSEVKPPVKQQVSSTPFKTVV 721
           LSEV+G +LPY+S+ GVR RI  VAPNLVH DEREP      +KP  K+ +S+TPF+TVV
Sbjct: 660 LSEVSGVKLPYNSIEGVRSRIKSVAPNLVHTDEREPAAFGPSLKPECKEAMSTTPFQTVV 719

Query: 722 ENFYMTDAITRASKIMAQCSATLLKK 747
           ENFYMT++ITRASKIMAQCSA LLKK
Sbjct: 720 ENFYMTNSITRASKIMAQCSAVLLKK 745



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.134    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 14,201,541
Number of extensions: 552114
Number of successful extensions: 1089
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 1088
Number of HSP's successfully gapped: 1
Length of query: 747
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 641
Effective length of database: 8,200,473
Effective search space: 5256503193
Effective search space used: 5256503193
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 115 (48.9 bits)