Os03g0711500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Coatomer alpha subunit.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0711500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Coatomer alpha subunit.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.52 | 0.276 | 12.3 | 1.68 | 0.666 | 0.728 | -0.137 | -1.66 | 0.586 | 23.5 | 93.59 | 406 | -- | -- |
| 36.81 | 0.283 | 12.3 | 1.61 | 0.693 | 0.718 | 0.115 | -- | 0.606 | 23.2 | 92.43 | 430 | -- | -- |
| 34.58 | 0.274 | 12.3 | 1.68 | 0.661 | 0.732 | -- | -1.6 | 0.586 | 23.5 | 93.57 | 389 | -- | -- |
| 36.83 | 0.283 | 12.3 | 1.6 | 0.683 | 0.689 | -- | -- | 0.598 | 23.2 | 92.38 | 432 | -- | -- |
| 54.56 | 0.346 | 12.3 | 1.6 | -- | 0.514 | -- | -0.265 | 0.613 | -- | 86.32 | 8 | -- | -- |
| 41.97 | 0.304 | 12.4 | 1.64 | 0.635 | -- | 0.0191 | -- | 0.504 | 0.282 | -- | -- | -- | -- |
| 41.97 | 0.303 | 12.4 | 1.64 | 0.634 | -- | -- | -- | 0.504 | 0.285 | -- | -- | -- | -- |
| 49.43 | 0.329 | 12.3 | 1.64 | -- | 0.529 | -- | -- | 0.566 | -- | 73 | 2 | -- | -- |
| 103.29 | 0.473 | 12.4 | -- | 0.711 | 0.881 | -- | -- | 0.467 | 22.9 | 91.62 | 411 | -- | -- |
| 67.29 | 0.383 | 12.3 | 1.66 | -- | -- | -- | -- | 0.514 | -- | -- | -- | -- | -- |
| 113.17 | 0.498 | 12.4 | -- | 0.658 | -- | -- | -- | 0.321 | 0.418 | -- | -- | -- | -- |
| 118.73 | 0.507 | 12.4 | -- | -- | 0.606 | -- | -- | 0.422 | -- | 81 | 5 | -- | -- |
| 140.38 | 0.553 | 12.4 | -- | -- | -- | -- | -- | 0.329 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.53 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 2 | 35.53 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 18 | 8 |
| 14 | 36.04 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 18 | 16 |
| 29 | 36.14 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 5 | 21 |
| 32 | 36.16 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 43 | 36.23 | humidity | 90.0 | 720 | > th | dose dependent | sin | 13 | NA |
| 56 | 36.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 58 | 36.32 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 152 | 36.77 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 159 | 36.79 | humidity | 90.0 | 720 | > th | dose dependent | no | NA | NA |
| 160 | 36.79 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 175 | 36.81 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 192 | 36.89 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 224 | 37.02 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 228 | 37.03 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 3 |
| 246 | 37.08 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 247 | 37.08 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 248 | 37.08 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 10 | 10 |
| 252 | 37.09 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 268 | 37.09 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 10 | 14 |
| 270 | 37.09 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 10 | 16 |
| 294 | 37.15 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 311 | 37.20 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 314 | 37.21 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 323 | 37.23 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 388 | 37.32 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 395 | 37.34 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 404 | 37.37 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 490 | 37.52 | humidity | 90.0 | 720 | > th | dose independent | rect. | 20 | 6 |
| 524 | 37.59 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 545 | 37.64 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 546 | 37.64 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 12 | 3 |
| 614 | 37.74 | humidity | 80.0 | 1440 | > th | dose independent | sin | 21 | NA |
| 643 | 37.76 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 21 |
| 677 | 37.78 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 19 |
| 729 | 37.82 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 743 | 37.83 | humidity | 80.0 | 1440 | < th | dose independent | sin | 22 | NA |
| 754 | 37.84 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 17 | 2 |
| 763 | 37.85 | radiation | 10.0 | 1440 | > th | dose independent | sin | 18 | NA |
| 797 | 37.86 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 805 | 37.87 | temperature | 20.0 | 30 | > th | dose independent | rect. | 22 | 8 |
| 809 | 37.87 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 22 |
| 849 | 37.90 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 24 | 12 |
| 898 | 37.93 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 24 | 17 |
| 908 | 37.94 | humidity | 90.0 | 720 | > th | dose independent | rect. | 18 | 18 |
| 999 | 37.99 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 12 | 18 |