Os03g0710900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to CASP protein-like; CCAAT displacement protein-like.
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Os03g0710900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CASP protein-like; CCAAT displacement protein-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.84 | 0.168 | 11.5 | 0.278 | 0.162 | 0.447 | 0.391 | -0.422 | 0.271 | 23.1 | 92.98 | 281 | -- | -- |
| 12.93 | 0.167 | 11.5 | 0.279 | 0.163 | 0.562 | 0.425 | -- | 0.262 | 22.8 | 93.79 | 253 | -- | -- |
| 13.38 | 0.17 | 11.5 | 0.273 | 0.169 | 0.453 | -- | -0.539 | 0.269 | 23.8 | 93.38 | 319 | -- | -- |
| 13.6 | 0.172 | 11.5 | 0.263 | 0.165 | 0.515 | -- | -- | 0.256 | 23.9 | 93.9 | 238 | -- | -- |
| 14.94 | 0.18 | 11.5 | 0.266 | -- | 0.499 | -- | -0.555 | 0.265 | -- | 93.7 | 209 | -- | -- |
| 15.05 | 0.182 | 11.5 | 0.292 | 0.196 | -- | 0.308 | -- | 0.223 | 1.34 | -- | -- | -- | -- |
| 15.39 | 0.184 | 11.5 | 0.281 | 0.2 | -- | -- | -- | 0.22 | 1.89 | -- | -- | -- | -- |
| 15.17 | 0.181 | 11.5 | 0.26 | -- | 0.46 | -- | -- | 0.264 | -- | 93.49 | 219 | -- | -- |
| 15.38 | 0.183 | 11.5 | -- | 0.162 | 0.494 | -- | -- | 0.236 | 23.6 | 93.5 | 254 | -- | -- |
| 17.81 | 0.197 | 11.5 | 0.289 | -- | -- | -- | -- | 0.225 | -- | -- | -- | -- | -- |
| 17.47 | 0.196 | 11.5 | -- | 0.205 | -- | -- | -- | 0.189 | 1.93 | -- | -- | -- | -- |
| 16.89 | 0.191 | 11.5 | -- | -- | 0.411 | -- | -- | 0.244 | -- | 92.59 | 222 | -- | -- |
| 20.02 | 0.209 | 11.5 | -- | -- | -- | -- | -- | 0.193 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 12.84 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 4 | 12.97 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 15 | 8 |
| 9 | 13.11 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 13 | 10 |
| 10 | 13.14 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 16 | 15 |
| 13 | 13.15 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 20 | 13.15 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 11 | 20 |
| 37 | 13.19 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 50 | 13.20 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 53 | 13.21 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 91 | 13.25 | humidity | 90.0 | 270 | > th | dose dependent | no | NA | NA |
| 102 | 13.26 | humidity | 90.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 107 | 13.26 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 110 | 13.27 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 14 |
| 111 | 13.27 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 14 |
| 126 | 13.29 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 18 |
| 128 | 13.29 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 136 | 13.31 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 139 | 13.31 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 150 | 13.32 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 151 | 13.32 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 158 | 13.33 | temperature | 15.0 | 10 | > th | dose independent | rect. | 23 | 15 |
| 161 | 13.33 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 23 | 8 |
| 167 | 13.34 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 168 | 13.34 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 181 | 13.36 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 10 |
| 191 | 13.37 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 192 | 13.37 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 10 |
| 195 | 13.37 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 203 | 13.38 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 210 | 13.38 | temperature | 15.0 | 270 | > th | dose independent | rect. | 11 | 21 |
| 215 | 13.39 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 216 | 13.39 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 14 |
| 220 | 13.39 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 221 | 13.39 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 6 |
| 223 | 13.40 | radiation | 1.0 | 270 | < th | dose independent | sin | 3 | NA |
| 224 | 13.40 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 4 |
| 229 | 13.40 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 233 | 13.40 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 23 | 8 |
| 242 | 13.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 251 | 13.42 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 252 | 13.42 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 254 | 13.42 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 255 | 13.42 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 258 | 13.42 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 259 | 13.42 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 269 | 13.42 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 271 | 13.42 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 283 | 13.43 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 285 | 13.43 | humidity | 50.0 | 90 | > th | dose independent | rect. | 14 | 18 |
| 291 | 13.43 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 294 | 13.44 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 22 | 7 |
| 304 | 13.44 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 325 | 13.45 | temperature | 15.0 | 10 | > th | dose independent | rect. | 14 | 18 |
| 344 | 13.46 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 345 | 13.46 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 5 | 18 |
| 349 | 13.46 | radiation | 1.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 366 | 13.47 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 368 | 13.47 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 420 | 13.48 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 19 | 12 |
| 422 | 13.48 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 1 | 19 |
| 432 | 13.49 | temperature | 20.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 438 | 13.49 | wind | 1.0 | 10 | > th | dose independent | rect. | 14 | 9 |
| 453 | 13.49 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 476 | 13.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 494 | 13.50 | temperature | 20.0 | 30 | > th | dose independent | rect. | 14 | 9 |
| 502 | 13.50 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 23 | 15 |
| 511 | 13.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 521 | 13.50 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 18 | 14 |
| 522 | 13.50 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 23 | 15 |
| 556 | 13.51 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 9 |
| 568 | 13.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 571 | 13.51 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 588 | 13.52 | wind | 1.0 | 10 | > th | dose independent | rect. | 8 | 6 |
| 593 | 13.52 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 8 |
| 602 | 13.52 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 624 | 13.53 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 9 |
| 626 | 13.53 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 14 | 9 |
| 629 | 13.53 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 9 |
| 636 | 13.53 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 23 | 15 |
| 647 | 13.53 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 7 |
| 660 | 13.53 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 689 | 13.54 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 8 | 6 |
| 727 | 13.55 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 770 | 13.56 | radiation | 1.0 | 270 | > th | dose independent | sin | 4 | NA |
| 775 | 13.56 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 2 | 7 |
| 814 | 13.56 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 22 | 9 |
| 823 | 13.56 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 18 |
| 841 | 13.57 | wind | 9.0 | 10 | < th | dose independent | rect. | 23 | 15 |
| 842 | 13.57 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 15 |
| 852 | 13.57 | wind | 9.0 | 90 | < th | dose independent | rect. | 14 | 18 |
| 879 | 13.58 | wind | 1.0 | 720 | < th | dose independent | rect. | 23 | 1 |
| 881 | 13.58 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 5 |
| 885 | 13.58 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 887 | 13.58 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 888 | 13.58 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 5 |
| 891 | 13.58 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 24 | 5 |
| 894 | 13.58 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 914 | 13.58 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 19 |
| 958 | 13.59 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 20 | 5 |
| 978 | 13.59 | humidity | 50.0 | 10 | > th | dose independent | rect. | 14 | 9 |
| 980 | 13.59 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 9 |