Os03g0707300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0707300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.5 | 0.242 | 8.76 | 0.357 | 0.46 | -0.407 | -0.276 | 4.08 | 0.0713 | 7.94 | 30 | 1258 | -- | -- |
| 27.56 | 0.244 | 8.87 | -0.475 | 0.475 | 0.183 | -0.38 | -- | -0.0159 | 8 | 35.08 | 7406 | -- | -- |
| 26.65 | 0.24 | 8.76 | 0.393 | 0.454 | -0.426 | -- | 4.19 | 0.0916 | 7.99 | 29.8 | 1247 | -- | -- |
| 27.73 | 0.245 | 8.87 | -0.497 | 0.464 | 0.188 | -- | -- | -0.0225 | 7.88 | 35 | 7418 | -- | -- |
| 38.07 | 0.287 | 8.76 | 0.396 | -- | -0.444 | -- | 4.33 | 0.113 | -- | 29.8 | 1208 | -- | -- |
| 28.63 | 0.251 | 8.87 | -0.452 | 0.474 | -- | -0.307 | -- | -0.00036 | 7.9 | -- | -- | -- | -- |
| 28.9 | 0.252 | 8.86 | -0.46 | 0.473 | -- | -- | -- | 0.000137 | 7.97 | -- | -- | -- | -- |
| 39.53 | 0.293 | 8.88 | -0.522 | -- | 0.192 | -- | -- | -0.023 | -- | 35 | 7406 | -- | -- |
| 34.13 | 0.272 | 8.85 | -- | 0.483 | 0.12 | -- | -- | 0.0345 | 7.88 | 35 | 7470 | -- | -- |
| 41.13 | 0.3 | 8.88 | -0.455 | -- | -- | -- | -- | 0.00628 | -- | -- | -- | -- | -- |
| 34.49 | 0.275 | 8.85 | -- | 0.47 | -- | -- | -- | 0.0514 | 8.03 | -- | -- | -- | -- |
| 42.41 | 0.303 | 8.86 | -- | -- | -0.278 | -- | -- | 0.102 | -- | 33.79 | 47520 | -- | -- |
| 46.6 | 0.319 | 8.87 | -- | -- | -- | -- | -- | 0.0568 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.85 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 5 |
| 2 | 25.88 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 3 | 25.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 5 |
| 4 | 25.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 6 | 25.91 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 18 | 14 |
| 17 | 26.07 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 20 | 26.09 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 21 | 26.10 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 22 | 26.10 | temperature | 25.0 | 90 | > th | dose independent | rect. | 17 | 15 |
| 23 | 26.11 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 30 | 26.12 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 49 | 26.18 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 20 |
| 58 | 26.21 | humidity | 50.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 64 | 26.21 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 20 |
| 65 | 26.22 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 20 |
| 86 | 26.27 | humidity | 50.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 91 | 26.28 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 112 | 26.32 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 122 | 26.33 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 128 | 26.34 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 18 |
| 150 | 26.37 | humidity | 50.0 | 14400 | > th | dose independent | sin | 14 | NA |
| 162 | 26.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 166 | 26.39 | wind | 1.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 174 | 26.39 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 13 |
| 191 | 26.42 | wind | 1.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 201 | 26.43 | wind | 1.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 210 | 26.44 | wind | 1.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 229 | 26.46 | humidity | 50.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 247 | 26.47 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 12 | 3 |
| 259 | 26.48 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 265 | 26.48 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 14 | 10 |
| 291 | 26.49 | humidity | 50.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 297 | 26.50 | wind | 1.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 315 | 26.51 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 402 | 26.54 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 24 | 15 |
| 414 | 26.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 417 | 26.54 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 418 | 26.55 | wind | 1.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 419 | 26.55 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 424 | 26.55 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 11 |
| 425 | 26.55 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 13 |
| 432 | 26.55 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 17 | 18 |
| 441 | 26.56 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 444 | 26.56 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 9 |
| 456 | 26.56 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 459 | 26.56 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 506 | 26.58 | humidity | 60.0 | 14400 | < th | dose dependent | no | NA | NA |
| 509 | 26.58 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 12 |
| 587 | 26.59 | temperature | 30.0 | 1440 | > th | dose independent | sin | 23 | NA |
| 624 | 26.59 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 18 | NA |
| 628 | 26.59 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 7 |
| 632 | 26.59 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 8 | 10 |
| 694 | 26.60 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 728 | 26.60 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 738 | 26.60 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 2 |
| 838 | 26.62 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 866 | 26.62 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 974 | 26.62 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 990 | 26.63 | temperature | 30.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 992 | 26.63 | humidity | 60.0 | 14400 | < th | dose independent | sin | 8 | NA |