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Os03g0703900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.34 (0.0256) R2 : 0.473
β1 : 1.1 (0.0936) R2dD : 0.165 R2D : 0.156
β2 : 1.08 (0.0661) R2dC : 0.31 R2C : 0.312
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0868 (0.0546) R2dN8 : 0.00392 R2N8 : -0.00622
σ : 0.481
deviance : 105.44
__
_____
C
peak time of C : 7.19
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
91.73 0.45 6.29 1.2 0.862 0.49 -0.3 0.221 0.32 7.93 24.6 264 -- --
91.89 0.446 6.29 1.27 0.861 0.494 -0.242 -- 0.334 7.91 24.6 263 -- --
91.98 0.447 6.29 1.21 0.864 0.488 -- 0.166 0.323 7.9 24.6 263 -- --
92.07 0.447 6.29 1.26 0.862 0.497 -- -- 0.342 7.91 24.57 263 -- --
119.02 0.508 6.27 1.41 -- 0.835 -- -0.243 0.474 -- 25.2 341 -- --
105.43 0.481 6.34 1.1 1.08 -- -0.0627 -- 0.0867 7.2 -- -- -- --
105.44 0.481 6.34 1.1 1.08 -- -- -- 0.0868 7.19 -- -- -- --
118.63 0.507 6.28 1.36 -- 0.869 -- -- 0.47 -- 25.22 374 -- --
132.89 0.537 6.33 -- 0.97 0.389 -- -- 0.176 7.39 24.5 262 -- --
167.07 0.604 6.36 1.12 -- -- -- -- 0.106 -- -- -- -- --
137.32 0.548 6.37 -- 1.09 -- -- -- -0.0356 7.13 -- -- -- --
165.47 0.599 6.33 -- -- 0.715 -- -- 0.267 -- 25.2 350 -- --
200.14 0.66 6.39 -- -- -- -- -- -0.0186 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 78.89 temperature 25.0 90 > th dose dependent rect. 1 3
2 78.90 temperature 15.0 270 > th dose dependent rect. 23 2
3 79.00 atmosphere 1000.0 10 > th dose independent rect. 3 23
4 79.00 temperature 10.0 90 > th dose dependent rect. 8 20
6 79.26 temperature 15.0 270 > th dose dependent rect. 22 4
10 79.41 temperature 10.0 270 > th dose dependent rect. 21 6
12 79.54 wind 7.0 270 < th dose independent rect. 6 21
18 79.87 temperature 10.0 10 > th dose dependent rect. 8 21
20 80.03 wind 9.0 270 < th dose dependent rect. 7 20
22 80.15 precipitation 0.1 270 < th dose independent rect. 6 21
23 80.15 precipitation 0.1 270 < th dose dependent rect. 6 21
25 80.29 wind 9.0 90 < th dose dependent rect. 9 19
27 80.35 wind 5.0 270 < th dose independent rect. 23 2
30 80.50 temperature 25.0 270 > th dose independent rect. 23 4
35 80.66 precipitation 0.1 270 < th dose independent rect. 3 3
36 80.66 precipitation 0.1 270 < th dose dependent rect. 3 3
40 80.77 temperature 30.0 270 < th dose dependent rect. 3 3
44 80.92 temperature 25.0 90 > th dose independent rect. 1 3
46 81.04 radiation 20.0 270 < th dose dependent rect. 3 6
47 81.06 wind 9.0 270 < th dose independent rect. 3 3
48 81.06 temperature 10.0 270 > th dose independent rect. 3 3
50 81.06 temperature 30.0 270 < th dose independent rect. 3 3
51 81.06 humidity 50.0 270 > th dose independent rect. 3 3
54 81.06 atmosphere 995.0 270 > th dose independent rect. 3 3
55 81.06 atmosphere 1015.0 270 < th dose independent rect. 3 3
56 81.06 radiation 20.0 270 < th dose independent rect. 3 3
59 81.06 temperature 10.0 270 > th dose independent rect. 6 21
63 81.21 temperature 25.0 10 < th dose independent rect. 2 1
65 81.26 radiation 40.0 270 < th dose dependent rect. 3 3
66 81.27 wind 7.0 90 < th dose dependent rect. 23 5
68 81.28 wind 7.0 10 < th dose dependent rect. 2 1
70 81.28 temperature 30.0 30 < th dose dependent rect. 2 1
73 81.30 atmosphere 995.0 10 > th dose dependent rect. 2 1
77 81.32 wind 5.0 10 < th dose independent rect. 2 1
81 81.35 temperature 25.0 90 > th dose independent rect. 1 1
82 81.35 atmosphere 1000.0 10 > th dose independent rect. 2 1
85 81.36 radiation 1.0 4320 < th dose dependent rect. 3 1
87 81.37 temperature 10.0 10 > th dose independent rect. 2 1
90 81.37 humidity 50.0 10 > th dose independent rect. 2 1
94 81.37 atmosphere 1010.0 10 < th dose independent rect. 2 1
96 81.37 radiation 1.0 10 < th dose independent rect. 2 1
101 81.37 precipitation 0.1 10 < th dose independent rect. 2 1
102 81.37 temperature 10.0 10 > th dose independent rect. 3 23
103 81.37 radiation 1.0 10 < th dose dependent rect. 2 1
108 81.37 precipitation 0.1 10 < th dose dependent rect. 2 1
110 81.38 temperature 10.0 10 > th dose dependent rect. 2 1
132 81.43 atmosphere 1015.0 30 < th dose dependent rect. 2 1
148 81.48 wind 7.0 90 < th dose dependent rect. 21 7
159 81.52 humidity 50.0 30 > th dose dependent rect. 2 1
173 81.59 wind 9.0 1440 < th dose independent rect. 3 1
174 81.59 temperature 10.0 1440 > th dose independent rect. 3 1
177 81.59 temperature 30.0 1440 < th dose independent rect. 3 1
181 81.59 humidity 50.0 1440 > th dose independent rect. 3 1
190 81.59 atmosphere 995.0 1440 > th dose independent rect. 3 1
191 81.59 radiation 1.0 1440 < th dose independent rect. 3 1
211 81.59 temperature 10.0 1440 > th dose independent rect. 4 23
221 81.60 wind 7.0 90 < th dose independent rect. 9 19
223 81.61 wind 1.0 30 > th dose independent rect. 2 1
231 81.65 wind 9.0 270 < th dose dependent rect. 23 2
248 81.77 wind 5.0 270 < th dose independent rect. 22 4
250 81.78 precipitation 0.1 10 < th dose independent rect. 3 23
251 81.78 precipitation 0.1 10 < th dose dependent rect. 3 23
267 81.94 temperature 10.0 10 > th dose dependent rect. 23 6
271 82.03 wind 5.0 270 < th dose independent rect. 21 6
282 82.15 wind 9.0 270 < th dose dependent rect. 18 9
328 82.53 wind 7.0 10 < th dose dependent rect. 21 8
331 82.58 atmosphere 1015.0 270 < th dose independent rect. 6 21
332 82.58 atmosphere 995.0 270 > th dose independent rect. 1 22
333 82.58 wind 9.0 90 < th dose dependent rect. 11 17
335 82.61 atmosphere 995.0 270 > th dose dependent rect. 3 3
337 82.62 wind 7.0 10 < th dose dependent rect. 23 6
348 82.70 humidity 80.0 270 > th dose independent rect. 22 4
352 82.76 humidity 80.0 270 > th dose independent rect. 23 2
353 82.76 humidity 50.0 270 > th dose dependent rect. 3 3
357 82.81 atmosphere 1015.0 270 < th dose independent rect. 23 2
359 82.82 atmosphere 1000.0 90 > th dose independent rect. 4 19
371 82.92 wind 9.0 270 < th dose dependent rect. 3 3
380 82.97 radiation 40.0 30 < th dose dependent rect. 3 23
392 83.06 precipitation 0.1 270 < th dose independent rect. 23 2
393 83.06 precipitation 0.1 270 < th dose dependent rect. 23 2
400 83.07 temperature 10.0 270 > th dose independent rect. 23 2
402 83.07 temperature 30.0 270 < th dose independent rect. 23 2
406 83.07 humidity 50.0 270 > th dose independent rect. 23 2
410 83.07 atmosphere 995.0 270 > th dose independent rect. 23 2
415 83.07 radiation 1.0 270 < th dose independent rect. 23 2
420 83.07 temperature 10.0 270 > th dose independent rect. 1 22
422 83.07 radiation 1.0 270 < th dose dependent rect. 23 2
433 83.12 temperature 30.0 90 < th dose dependent rect. 4 7
434 83.12 humidity 50.0 90 > th dose dependent rect. 4 7
448 83.24 atmosphere 995.0 10 > th dose dependent rect. 5 18
464 83.35 radiation 1.0 270 < th dose independent rect. 3 10
466 83.36 atmosphere 995.0 270 > th dose independent rect. 2 20
473 83.40 radiation 30.0 90 < th dose independent rect. 4 7
479 83.43 radiation 20.0 30 < th dose independent rect. 3 23
481 83.43 humidity 50.0 90 > th dose dependent rect. 4 5
489 83.49 temperature 10.0 270 > th dose dependent rect. 22 14
496 83.55 precipitation 0.1 90 < th dose independent rect. 9 19
498 83.55 precipitation 0.1 90 < th dose dependent rect. 9 19
507 83.61 humidity 50.0 90 > th dose dependent rect. 23 5
511 83.63 atmosphere 995.0 90 > th dose dependent rect. 4 19
516 83.65 atmosphere 1015.0 90 < th dose independent rect. 23 5
520 83.65 radiation 30.0 10 < th dose dependent rect. 5 19
522 83.66 radiation 20.0 30 < th dose independent rect. 5 18
535 83.70 temperature 10.0 90 > th dose independent rect. 9 19
541 83.72 radiation 30.0 10 < th dose dependent rect. 5 7
542 83.73 temperature 20.0 90 > th dose independent rect. 9 19
546 83.75 wind 1.0 270 > th dose independent rect. 3 3
549 83.76 atmosphere 1015.0 90 < th dose independent rect. 9 19
552 83.77 wind 9.0 10 < th dose dependent rect. 9 20
565 83.82 radiation 40.0 90 < th dose dependent rect. 4 19
571 83.86 atmosphere 1000.0 10 > th dose independent rect. 5 18
584 83.92 wind 9.0 10 < th dose independent rect. 8 21
600 83.99 temperature 10.0 10 > th dose dependent rect. 21 8
607 84.03 temperature 10.0 90 > th dose independent rect. 23 5
608 84.03 temperature 30.0 90 < th dose independent rect. 23 5
609 84.03 humidity 50.0 90 > th dose independent rect. 23 5
612 84.03 atmosphere 995.0 90 > th dose independent rect. 23 5
614 84.03 radiation 1.0 90 < th dose independent rect. 23 5
620 84.03 temperature 10.0 90 > th dose independent rect. 4 19
622 84.03 radiation 1.0 90 < th dose dependent rect. 23 5
630 84.05 humidity 50.0 270 > th dose dependent rect. 23 2
631 84.06 radiation 40.0 10 < th dose dependent rect. 5 4
655 84.20 precipitation 0.1 90 < th dose independent rect. 23 5
659 84.20 precipitation 0.1 90 < th dose dependent rect. 23 5
663 84.22 atmosphere 995.0 270 > th dose independent rect. 16 15
685 84.29 radiation 20.0 270 < th dose independent rect. 2 7
703 84.35 radiation 10.0 270 < th dose dependent rect. 3 14
718 84.41 wind 7.0 90 < th dose dependent rect. 15 13
750 84.53 humidity 50.0 90 > th dose dependent rect. 21 7
783 84.67 wind 1.0 270 > th dose independent rect. 23 2
786 84.67 precipitation 0.1 270 < th dose independent rect. 21 6
788 84.67 precipitation 0.1 270 < th dose dependent rect. 21 6
799 84.72 radiation 1.0 10 < th dose dependent sin 9 NA
819 84.75 temperature 10.0 270 > th dose independent rect. 2 20
836 84.80 atmosphere 1015.0 10 < th dose independent rect. 8 21
844 84.82 radiation 1.0 270 < th dose dependent rect. 21 6
846 84.83 temperature 10.0 270 > th dose independent rect. 21 6
848 84.83 temperature 30.0 270 < th dose independent rect. 21 6
849 84.83 humidity 50.0 270 > th dose independent rect. 21 6
852 84.83 atmosphere 995.0 270 > th dose independent rect. 21 6
853 84.83 radiation 1.0 270 < th dose independent rect. 21 6
864 84.84 precipitation 0.1 10 < th dose independent rect. 5 3
865 84.84 precipitation 0.1 10 < th dose dependent rect. 5 3
873 84.88 wind 7.0 10 < th dose independent rect. 5 3
875 84.88 temperature 10.0 10 > th dose independent rect. 5 3
877 84.88 temperature 30.0 10 < th dose independent rect. 5 3
878 84.88 humidity 50.0 10 > th dose independent rect. 5 3
880 84.88 atmosphere 995.0 10 > th dose independent rect. 5 3
881 84.88 atmosphere 1015.0 10 < th dose independent rect. 5 3
882 84.88 temperature 10.0 10 > th dose independent rect. 8 21
901 84.94 radiation 20.0 10 < th dose independent rect. 5 7
926 85.02 temperature 20.0 10 > th dose independent rect. 8 21
955 85.09 atmosphere 1015.0 270 < th dose independent rect. 21 6
967 85.12 radiation 40.0 270 < th dose dependent rect. 16 15
975 85.16 temperature 25.0 270 > th dose independent rect. 22 15
977 85.16 atmosphere 1015.0 90 < th dose independent rect. 4 19
981 85.18 atmosphere 995.0 10 > th dose dependent rect. 5 3
986 85.19 precipitation 0.1 90 < th dose independent rect. 4 19
988 85.19 atmosphere 995.0 270 > th dose dependent rect. 23 2
989 85.19 humidity 50.0 10 > th dose dependent rect. 5 4
992 85.19 precipitation 0.1 90 < th dose dependent rect. 4 19