Os03g0699200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pescadillo, N-terminal domain containing protein.
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Os03g0699200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pescadillo, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.7 | 0.411 | 11 | 1.38 | 0.503 | -1.32 | 0.907 | -1.3 | 0.464 | 21.3 | 29.17 | 157 | -- | -- |
| 78.66 | 0.413 | 11 | 1.18 | 0.551 | -1.23 | 0.777 | -- | 0.434 | 20.9 | 29.71 | 126 | -- | -- |
| 79.17 | 0.414 | 11 | 1.34 | 0.521 | -1.26 | -- | -1.07 | 0.46 | 20.7 | 29.1 | 163 | -- | -- |
| 80.49 | 0.418 | 11 | 1.15 | 0.521 | -1.21 | -- | -- | 0.431 | 20.5 | 29.5 | 157 | -- | -- |
| 90.38 | 0.443 | 11 | 1.37 | -- | -1.48 | -- | -1.59 | 0.516 | -- | 41.59 | 373 | -- | -- |
| 99.35 | 0.467 | 11 | 1.46 | 0.717 | -- | 0.515 | -- | 0.669 | 18.6 | -- | -- | -- | -- |
| 99.95 | 0.468 | 11 | 1.45 | 0.721 | -- | -- | -- | 0.671 | 18.4 | -- | -- | -- | -- |
| 92.11 | 0.447 | 11 | 1.12 | -- | -1.53 | -- | -- | 0.446 | -- | 44.17 | 343 | -- | -- |
| 111.51 | 0.492 | 11.1 | -- | 0.419 | -1.69 | -- | -- | 0.23 | 21.4 | 28.44 | 217 | -- | -- |
| 126.97 | 0.527 | 11 | 1.43 | -- | -- | -- | -- | 0.656 | -- | -- | -- | -- | -- |
| 155.56 | 0.583 | 11 | -- | 0.702 | -- | -- | -- | 0.51 | 18.5 | -- | -- | -- | -- |
| 118.93 | 0.508 | 11.1 | -- | -- | -1.81 | -- | -- | 0.18 | -- | 29.2 | 358 | -- | -- |
| 181.22 | 0.628 | 11 | -- | -- | -- | -- | -- | 0.497 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.17 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 20 |
| 34 | 71.28 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 40 | 71.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 19 |
| 109 | 74.43 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 144 | 75.27 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 20 |
| 156 | 75.59 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 158 | 75.61 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 10 |
| 180 | 75.96 | temperature | 20 | 10 | > th | dose independent | rect. | 9 | 21 |
| 204 | 76.35 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 211 | 76.41 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 215 | 76.44 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 12 |
| 229 | 76.54 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 268 | 76.80 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 13 |
| 288 | 76.88 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 289 | 76.89 | temperature | 20 | 4320 | > th | dose independent | sin | 17 | NA |
| 304 | 76.97 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 14 |
| 338 | 77.09 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 464 | 77.64 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 475 | 77.66 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 481 | 77.70 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 492 | 77.73 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 18 |
| 510 | 77.79 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 543 | 77.86 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 2 |
| 564 | 77.90 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 579 | 77.91 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 669 | 78.07 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 769 | 78.23 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 772 | 78.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 805 | 78.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 843 | 78.32 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 853 | 78.33 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 866 | 78.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 878 | 78.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 19 |
| 888 | 78.38 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 900 | 78.38 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |