Os03g0693000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1336 domain containing protein.
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Os03g0693000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1336 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.37 | 0.267 | 10.9 | -0.827 | 1.52 | -2.44 | 0.332 | 6.11 | -0.176 | 5.74 | 49.98 | 292 | -- | -- |
| 36.87 | 0.283 | 11 | -0.958 | 1.55 | -1.23 | 0.257 | -- | -0.166 | 5.81 | 49.16 | 257 | -- | -- |
| 32.62 | 0.266 | 10.9 | -0.823 | 1.51 | -2.48 | -- | 6.01 | -0.178 | 5.72 | 49.98 | 291 | -- | -- |
| 35.38 | 0.277 | 11 | -0.954 | 1.5 | -0.708 | -- | -- | -0.178 | 5.76 | 54 | 417 | -- | -- |
| 134.47 | 0.54 | 11 | -0.659 | -- | -2.3 | -- | 3.42 | -0.203 | -- | 53 | 399 | -- | -- |
| 43.76 | 0.31 | 11 | -1.05 | 1.68 | -- | 0.686 | -- | -0.134 | 5.85 | -- | -- | -- | -- |
| 44.89 | 0.314 | 11 | -1.05 | 1.68 | -- | -- | -- | -0.137 | 5.8 | -- | -- | -- | -- |
| 81.67 | 0.421 | 11 | -0.913 | -- | -1.46 | -- | -- | -0.0243 | -- | 74 | 497 | -- | -- |
| 59.22 | 0.358 | 11 | -- | 1.43 | -0.879 | -- | -- | -0.102 | 5.77 | 55.48 | 467 | -- | -- |
| 192.09 | 0.648 | 11 | -0.997 | -- | -- | -- | -- | -0.0976 | -- | -- | -- | -- | -- |
| 73.9 | 0.402 | 10.9 | -- | 1.67 | -- | -- | -- | -0.0203 | 5.83 | -- | -- | -- | -- |
| 102.54 | 0.472 | 10.9 | -- | -- | -1.6 | -- | -- | 0.0648 | -- | 72.86 | 516 | -- | -- |
| 218.32 | 0.69 | 11 | -- | -- | -- | -- | -- | 0.013 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.06 | humidity | 60 | 720 | > th | dose independent | rect. | 17 | 12 |
| 3 | 31.38 | temperature | 30 | 270 | < th | dose independent | rect. | 17 | 12 |
| 4 | 31.43 | humidity | 50 | 720 | > th | dose independent | rect. | 16 | 7 |
| 5 | 31.43 | humidity | 50 | 720 | > th | dose independent | rect. | 16 | 15 |
| 6 | 31.44 | humidity | 60 | 720 | > th | dose independent | rect. | 17 | 5 |
| 7 | 31.50 | humidity | 60 | 270 | > th | dose independent | sin | 12 | NA |
| 8 | 31.51 | humidity | 50 | 270 | > th | dose independent | sin | 20 | NA |
| 13 | 31.80 | humidity | 70 | 30 | > th | dose independent | sin | 11 | NA |
| 17 | 31.84 | temperature | 30 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 31 | 31.88 | temperature | 30 | 270 | < th | dose independent | sin | 13 | NA |
| 37 | 31.97 | humidity | 60 | 270 | < th | dose dependent | rect. | 16 | 3 |
| 73 | 32.09 | humidity | 60 | 270 | < th | dose independent | rect. | 16 | 4 |
| 111 | 32.20 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 5 |
| 115 | 32.30 | humidity | 50 | 270 | < th | dose independent | rect. | 16 | 19 |
| 116 | 32.31 | humidity | 50 | 270 | < th | dose independent | sin | 10 | NA |
| 136 | 32.31 | humidity | 50 | 270 | < th | dose dependent | sin | 10 | NA |
| 138 | 32.31 | humidity | 50 | 270 | < th | dose dependent | rect. | 16 | 19 |
| 341 | 32.38 | humidity | 50 | 270 | < th | dose independent | no | NA | NA |
| 343 | 32.38 | temperature | 30 | 270 | > th | dose independent | rect. | 16 | 3 |
| 569 | 32.42 | humidity | 50 | 270 | < th | dose dependent | no | NA | NA |
| 716 | 32.45 | temperature | 30 | 270 | > th | dose dependent | sin | 12 | NA |
| 825 | 32.53 | humidity | 70 | 90 | < th | dose independent | sin | 12 | NA |
| 832 | 32.56 | temperature | 30 | 270 | > th | dose independent | sin | 13 | NA |
| 855 | 32.61 | humidity | 70 | 270 | < th | dose dependent | sin | 12 | NA |
| 859 | 32.69 | humidity | 50 | 270 | > th | dose independent | no | NA | NA |
| 860 | 32.69 | radiation | 20 | 270 | > th | dose independent | rect. | 16 | 15 |
| 909 | 32.76 | radiation | 20 | 270 | > th | dose independent | rect. | 16 | 1 |
| 972 | 32.93 | radiation | 10 | 270 | > th | dose dependent | rect. | 16 | 15 |