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Os03g0691400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Phenylacetic acid degradation-related protein domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.1 (0.0157) R2 : 0.71
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.31 (0.0404) R2dC : 0.675 R2C : 0.673
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.221 (0.0331) R2dN8 : 0.0366 R2N8 : 0.0351
σ : 0.297
deviance : 40.22
__
_____
C
peak time of C : 4.26
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.21 0.271 13.1 -0.0109 1.35 -0.559 1.23 0.461 0.183 5.02 64.65 910 -- --
33.55 0.27 13.1 0.0287 1.35 -0.564 1.28 -- 0.187 5.07 65.18 905 -- --
36.83 0.283 13.1 -0.0444 1.37 -0.484 -- 0.666 0.188 4.83 63.13 860 -- --
36.66 0.282 13.1 0.0223 1.27 -0.398 -- -- 0.204 4.33 57.44 1333 -- --
96.47 0.46 13.1 0.0583 -- 0.841 -- -0.0224 0.292 -- 61.69 1212 -- --
37.96 0.289 13.1 0.0421 1.31 -- 0.926 -- 0.23 4.38 -- -- -- --
40.19 0.297 13.1 0.0337 1.31 -- -- -- 0.225 4.26 -- -- -- --
96.29 0.459 13.1 0.0579 -- 0.792 -- -- 0.31 -- 66.11 1209 -- --
36.66 0.282 13.1 -- 1.27 -0.392 -- -- 0.199 4.33 57.29 1337 -- --
133.34 0.54 13.1 0.0862 -- -- -- -- 0.26 -- -- -- -- --
40.22 0.297 13.1 -- 1.31 -- -- -- 0.221 4.26 -- -- -- --
96.38 0.459 13.1 -- -- 0.793 -- -- 0.304 -- 66.11 1209 -- --
133.53 0.539 13.1 -- -- -- -- -- 0.25 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.19 radiation 30.0 14400 < th dose independent rect. 17 9
3 31.61 temperature 25.0 270 < th dose independent rect. 22 18
8 31.84 radiation 1.0 720 > th dose independent rect. 10 20
10 31.91 radiation 30.0 14400 < th dose independent rect. 17 6
15 32.02 radiation 1.0 720 > th dose independent rect. 10 9
25 32.03 humidity 50.0 720 > th dose dependent rect. 16 4
34 32.13 temperature 30.0 270 < th dose independent rect. 9 8
36 32.16 radiation 20.0 1440 < th dose dependent rect. 20 9
37 32.16 humidity 50.0 720 > th dose dependent rect. 16 18
39 32.18 wind 7.0 270 < th dose independent rect. 15 7
44 32.21 precipitation 0.1 720 < th dose independent rect. 17 15
46 32.21 precipitation 0.1 720 < th dose dependent rect. 17 15
47 32.22 radiation 30.0 14400 < th dose independent rect. 17 13
51 32.22 atmosphere 995.0 90 > th dose dependent rect. 17 16
53 32.24 wind 9.0 270 < th dose independent rect. 22 17
54 32.25 humidity 50.0 270 > th dose independent rect. 22 18
55 32.26 radiation 40.0 270 < th dose independent rect. 16 17
56 32.26 humidity 50.0 720 > th dose dependent rect. 15 8
61 32.30 atmosphere 1000.0 270 > th dose independent rect. 22 17
63 32.30 wind 9.0 270 < th dose dependent rect. 15 7
66 32.31 wind 1.0 270 > th dose independent rect. 15 7
67 32.31 atmosphere 1000.0 270 > th dose independent rect. 9 7
69 32.32 radiation 40.0 270 < th dose independent rect. 15 7
79 32.34 atmosphere 995.0 270 > th dose independent rect. 15 7
82 32.34 precipitation 0.1 270 < th dose independent rect. 22 17
86 32.34 precipitation 0.1 270 < th dose dependent rect. 22 17
88 32.35 humidity 90.0 720 < th dose independent rect. 17 7
92 32.36 temperature 10.0 270 > th dose independent rect. 15 7
94 32.36 precipitation 0.1 270 < th dose independent rect. 15 7
105 32.36 temperature 10.0 270 > th dose independent rect. 22 17
108 32.36 precipitation 0.1 270 < th dose dependent rect. 15 7
110 32.37 humidity 70.0 720 > th dose independent rect. 15 5
120 32.38 wind 7.0 270 < th dose independent rect. 16 17
121 32.38 humidity 50.0 90 > th dose independent rect. 24 17
122 32.38 radiation 40.0 270 < th dose dependent rect. 16 17
125 32.40 humidity 90.0 720 < th dose independent rect. 11 13
129 32.40 humidity 50.0 720 > th dose dependent sin 11 NA
136 32.41 radiation 1.0 720 < th dose dependent rect. 5 1
140 32.42 radiation 10.0 1440 < th dose independent rect. 20 9
142 32.42 atmosphere 1005.0 10 > th dose independent rect. 17 16
143 32.42 atmosphere 1015.0 270 < th dose independent rect. 22 17
161 32.45 temperature 30.0 720 < th dose independent rect. 16 3
171 32.46 radiation 1.0 720 < th dose dependent rect. 22 19
180 32.48 humidity 50.0 270 > th dose independent rect. 8 9
188 32.49 radiation 40.0 270 < th dose dependent rect. 15 7
197 32.51 temperature 30.0 720 < th dose independent rect. 16 10
199 32.51 wind 1.0 270 > th dose independent rect. 16 16
208 32.52 atmosphere 1000.0 10 > th dose independent rect. 24 17
212 32.53 radiation 10.0 10 < th dose independent rect. 17 7
218 32.53 precipitation 0.1 10 < th dose independent rect. 24 17
220 32.53 precipitation 0.1 10 < th dose dependent rect. 24 17
225 32.54 wind 9.0 270 < th dose independent rect. 9 7
233 32.55 wind 9.0 10 < th dose independent rect. 17 7
237 32.55 precipitation 0.1 720 < th dose independent rect. 11 18
242 32.55 precipitation 0.1 720 < th dose dependent rect. 11 18
250 32.57 temperature 10.0 10 > th dose independent rect. 17 7
251 32.57 atmosphere 1015.0 270 < th dose independent rect. 15 7
256 32.57 precipitation 0.1 10 < th dose independent rect. 17 7
260 32.57 wind 9.0 10 < th dose independent rect. 24 17
261 32.57 temperature 10.0 10 > th dose independent rect. 24 17
264 32.57 precipitation 0.1 10 < th dose dependent rect. 17 7
267 32.58 humidity 50.0 10 > th dose independent rect. 17 7
268 32.58 atmosphere 995.0 10 > th dose independent rect. 17 7
274 32.58 atmosphere 1015.0 10 < th dose independent rect. 24 17
276 32.58 radiation 30.0 10 < th dose dependent rect. 17 7
282 32.59 humidity 90.0 720 < th dose independent rect. 20 2
293 32.60 humidity 50.0 270 > th dose independent rect. 16 6
298 32.60 humidity 60.0 270 > th dose independent rect. 16 17
307 32.61 temperature 30.0 90 < th dose independent rect. 17 6
333 32.62 radiation 10.0 90 < th dose dependent rect. 16 7
348 32.63 wind 5.0 10 < th dose independent rect. 16 17
368 32.64 wind 1.0 30 > th dose independent rect. 17 8
379 32.64 precipitation 0.1 720 < th dose independent rect. 17 22
386 32.64 precipitation 0.1 720 < th dose dependent rect. 17 22
399 32.65 wind 7.0 720 < th dose independent rect. 20 9
400 32.65 precipitation 0.1 720 < th dose independent rect. 10 15
417 32.65 precipitation 0.1 720 < th dose dependent rect. 10 15
427 32.66 precipitation 0.1 270 < th dose independent rect. 9 7
452 32.66 precipitation 0.1 270 < th dose dependent rect. 9 7
463 32.67 humidity 50.0 720 > th dose independent rect. 16 9
464 32.67 radiation 30.0 270 < th dose independent rect. 11 11
469 32.67 humidity 90.0 720 < th dose dependent rect. 13 9
470 32.68 radiation 1.0 720 > th dose independent sin 17 NA
541 32.70 radiation 1.0 720 < th dose independent rect. 22 20
554 32.71 temperature 10.0 270 > th dose independent rect. 9 7
558 32.71 atmosphere 1015.0 270 < th dose independent rect. 9 7
564 32.71 temperature 10.0 270 > th dose independent rect. 16 17
566 32.71 atmosphere 995.0 270 > th dose independent rect. 16 17
576 32.71 humidity 50.0 720 > th dose dependent rect. 22 19
603 32.73 humidity 50.0 720 > th dose independent rect. 16 1
610 32.73 temperature 30.0 10 < th dose independent rect. 17 7
611 32.73 atmosphere 995.0 1440 > th dose independent rect. 18 7
618 32.73 precipitation 0.1 720 < th dose independent rect. 20 9
636 32.73 precipitation 0.1 720 < th dose dependent rect. 20 9
641 32.74 humidity 70.0 720 > th dose independent sin 11 NA
677 32.75 temperature 30.0 270 < th dose independent rect. 16 17
713 32.77 precipitation 0.1 720 < th dose independent rect. 13 16
721 32.77 precipitation 0.1 720 < th dose dependent rect. 13 16
738 32.78 radiation 30.0 720 < th dose dependent rect. 16 9
743 32.79 wind 1.0 270 > th dose independent rect. 9 7
757 32.80 precipitation 0.1 90 < th dose independent sin 8 NA
758 32.80 wind 7.0 720 < th dose independent rect. 17 1
763 32.80 temperature 10.0 1440 > th dose independent rect. 18 7
766 32.80 humidity 50.0 1440 > th dose independent rect. 18 7
769 32.80 radiation 20.0 1440 < th dose independent rect. 18 7
804 32.80 temperature 10.0 1440 > th dose independent rect. 2 16
813 32.80 precipitation 0.1 90 < th dose dependent sin 8 NA
843 32.82 temperature 30.0 720 < th dose independent sin 12 NA
853 32.82 precipitation 0.1 720 < th dose independent rect. 17 8
863 32.82 precipitation 0.1 720 < th dose dependent rect. 17 8
962 32.86 precipitation 0.1 720 < th dose independent sin 15 NA
977 32.86 precipitation 0.1 720 < th dose dependent sin 15 NA
978 32.86 atmosphere 995.0 270 > th dose dependent rect. 15 7