Os03g0649000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0649000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.99 | 0.456 | 12.6 | 1.25 | 2.8 | -1.09 | 1.48 | 1.26 | 0.135 | 4.98 | 20.56 | 1817 | -- | -- |
| 97.76 | 0.46 | 12.7 | 1.13 | 2.83 | -1.21 | 1.44 | -- | 0.112 | 4.95 | 20.5 | 1806 | -- | -- |
| 99.56 | 0.465 | 12.6 | 1.24 | 2.81 | -1.12 | -- | 1.2 | 0.13 | 4.98 | 20.6 | 1811 | -- | -- |
| 101.14 | 0.468 | 12.7 | 1 | 2.86 | -1.27 | -- | -- | 0.0664 | 4.98 | 20.6 | 1434 | -- | -- |
| 465.61 | 1 | 12.7 | 1.06 | -- | -1.46 | -- | 0.107 | 0.197 | -- | 20.7 | 322 | -- | -- |
| 130.76 | 0.536 | 12.7 | 0.457 | 2.81 | -- | 1.56 | -- | -0.211 | 5 | -- | -- | -- | -- |
| 136.98 | 0.548 | 12.8 | 0.454 | 2.82 | -- | -- | -- | -0.218 | 4.99 | -- | -- | -- | -- |
| 287.03 | 0.789 | 12.7 | 1 | -- | -1.92 | -- | -- | 0.304 | -- | 26.3 | 306 | -- | -- |
| 120.52 | 0.514 | 12.7 | -- | 2.75 | -0.701 | -- | -- | -0.154 | 5.18 | 20.6 | 1434 | -- | -- |
| 553.75 | 1.1 | 12.8 | 0.556 | -- | -- | -- | -- | -0.146 | -- | -- | -- | -- | -- |
| 142.42 | 0.558 | 12.8 | -- | 2.82 | -- | -- | -- | -0.269 | 4.98 | -- | -- | -- | -- |
| 314.32 | 0.826 | 12.7 | -- | -- | -1.84 | -- | -- | 0.278 | -- | 26.2 | 301 | -- | -- |
| 561.92 | 1.11 | 12.8 | -- | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 6 |
| 3 | 84.48 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 7 |
| 8 | 84.73 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 3 |
| 17 | 85.06 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 19 | 85.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 21 | 85.27 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 24 | 85.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 79 | 86.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 81 | 86.77 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 2 |
| 95 | 86.98 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 122 | 87.51 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 137 | 87.77 | temperature | 20 | 1440 | < th | dose independent | sin | 10 | NA |
| 149 | 88.02 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 319 | 91.87 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 332 | 92.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 581 | 94.38 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 586 | 94.40 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 798 | 95.63 | temperature | 25 | 1440 | < th | dose dependent | sin | 9 | NA |
| 831 | 95.83 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 868 | 96.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 900 | 96.23 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 935 | 96.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |