Os03g0647800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0647800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.87 | 0.338 | 8.6 | 0.323 | 0.548 | 0.995 | 0.892 | -0.37 | 0.434 | 20.1 | 25.95 | 1198 | -- | -- |
| 51.96 | 0.336 | 8.6 | 0.374 | 0.54 | 0.987 | 0.863 | -- | 0.42 | 20.1 | 25.54 | 1196 | -- | -- |
| 54.22 | 0.343 | 8.6 | 0.356 | 0.529 | 0.993 | -- | -0.124 | 0.438 | 20.2 | 25.83 | 1171 | -- | -- |
| 54.21 | 0.343 | 8.59 | 0.387 | 0.532 | 0.971 | -- | -- | 0.454 | 20.2 | 25.97 | 1168 | -- | -- |
| 60.58 | 0.363 | 8.6 | 0.334 | -- | 1.34 | -- | 0.0402 | 0.364 | -- | 24.5 | 865 | -- | -- |
| 85.88 | 0.434 | 8.58 | 0.707 | 0.639 | -- | 0.858 | -- | 0.512 | 21.2 | -- | -- | -- | -- |
| 88.47 | 0.44 | 8.58 | 0.676 | 0.634 | -- | -- | -- | 0.511 | 21.3 | -- | -- | -- | -- |
| 60.55 | 0.362 | 8.6 | 0.346 | -- | 1.34 | -- | -- | 0.376 | -- | 24.6 | 879 | -- | -- |
| 57.89 | 0.354 | 8.59 | -- | 0.515 | 1.05 | -- | -- | 0.421 | 20.2 | 25.77 | 1175 | -- | -- |
| 111.92 | 0.494 | 8.56 | 0.679 | -- | -- | -- | -- | 0.508 | -- | -- | -- | -- | -- |
| 100.51 | 0.469 | 8.6 | -- | 0.635 | -- | -- | -- | 0.436 | 21.4 | -- | -- | -- | -- |
| 63.51 | 0.371 | 8.6 | -- | -- | 1.41 | -- | -- | 0.326 | -- | 24.44 | 886 | -- | -- |
| 124.08 | 0.52 | 8.58 | -- | -- | -- | -- | -- | 0.433 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 11 |
| 23 | 53.56 | temperature | 25 | 1440 | > th | dose dependent | sin | 23 | NA |
| 26 | 53.56 | temperature | 25 | 1440 | > th | dose dependent | rect. | 22 | 19 |
| 31 | 53.58 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 37 | 53.60 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 55 | 53.65 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 146 | 53.82 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 168 | 53.86 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 185 | 53.90 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 215 | 53.99 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 243 | 54.13 | wind | 1 | 1440 | < th | dose independent | rect. | 4 | 2 |
| 283 | 54.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 284 | 54.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 291 | 54.40 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 295 | 54.41 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 6 |
| 334 | 54.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 14 |
| 340 | 54.61 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 345 | 54.61 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 351 | 54.63 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 352 | 54.63 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 365 | 54.67 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 20 |
| 379 | 54.71 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 384 | 54.74 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 402 | 54.77 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 425 | 54.79 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 437 | 54.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 17 |
| 470 | 54.83 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 475 | 54.84 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 490 | 54.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 558 | 54.88 | temperature | 30 | 1440 | < th | dose independent | sin | 22 | NA |
| 572 | 54.89 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 596 | 54.92 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 601 | 54.93 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 17 |
| 605 | 54.94 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 606 | 54.94 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 15 |
| 613 | 54.95 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 623 | 54.99 | temperature | 30 | 1440 | > th | dose independent | sin | 20 | NA |
| 633 | 55.00 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 742 | 55.05 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 750 | 55.07 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 886 | 55.30 | humidity | 70 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 907 | 55.33 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 921 | 55.33 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |