Os03g0646100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Plastid division protein ftsZ1 precursor.
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Os03g0646100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Plastid division protein ftsZ1 precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 273.73 | 0.777 | 4.49 | -2.54 | 0.757 | 3.11 | -0.55 | -5.81 | -0.0804 | 16.6 | 25.67 | 1361 | -- | -- |
| 288.48 | 0.791 | 4.28 | -0.995 | 0.413 | 2.73 | -0.254 | -- | 0.253 | 17.7 | 25.47 | 1656 | -- | -- |
| 274.12 | 0.771 | 4.46 | -2.45 | 0.75 | 3.13 | -- | -6 | 0.0903 | 16.3 | 26.28 | 1340 | -- | -- |
| 285.02 | 0.786 | 4.31 | -0.989 | 0.789 | 2.55 | -- | -- | 0.28 | 16.5 | 25.64 | 1344 | -- | -- |
| 278.53 | 0.777 | 4.49 | -2.71 | -- | 3.82 | -- | -8.09 | -0.00395 | -- | 26.33 | 1813 | -- | -- |
| 556.09 | 1.11 | 4.25 | -0.118 | 0.55 | -- | -0.867 | -- | 0.509 | 17.7 | -- | -- | -- | -- |
| 557.77 | 1.11 | 4.25 | -0.114 | 0.549 | -- | -- | -- | 0.505 | 18 | -- | -- | -- | -- |
| 293.22 | 0.798 | 4.3 | -1 | -- | 2.95 | -- | -- | 0.234 | -- | 25.5 | 1821 | -- | -- |
| 306.87 | 0.816 | 4.24 | -- | 0.79 | 2.34 | -- | -- | 0.551 | 16.5 | 26.69 | 1304 | -- | -- |
| 573.37 | 1.12 | 4.24 | -0.13 | -- | -- | -- | -- | 0.492 | -- | -- | -- | -- | -- |
| 558.11 | 1.11 | 4.25 | -- | 0.55 | -- | -- | -- | 0.517 | 18 | -- | -- | -- | -- |
| 317.63 | 0.83 | 4.25 | -- | -- | 2.74 | -- | -- | 0.436 | -- | 26.06 | 1820 | -- | -- |
| 573.82 | 1.12 | 4.24 | -- | -- | -- | -- | -- | 0.507 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 272.20 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 18 |
| 2 | 272.44 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 22 | 274.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 23 | 274.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 35 | 275.29 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 72 | 276.10 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 113 | 276.82 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 133 | 277.22 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 163 | 277.74 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 181 | 278.06 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 214 | 278.69 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 278 | 281.03 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 12 |
| 302 | 282.06 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 15 |
| 303 | 282.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 307 | 282.11 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 312 | 282.12 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 316 | 282.15 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 326 | 282.56 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 19 |
| 335 | 282.60 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 352 | 283.13 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 19 |
| 372 | 283.38 | temperature | 30 | 1440 | < th | dose independent | sin | 20 | NA |
| 374 | 283.39 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 384 | 283.66 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 16 |
| 385 | 283.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 19 |
| 386 | 283.71 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 388 | 283.72 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 400 | 283.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 412 | 283.78 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 423 | 283.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 427 | 283.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 438 | 283.80 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 440 | 283.80 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 520 | 284.90 | wind | 7 | 43200 | < th | dose independent | sin | 4 | NA |
| 540 | 285.35 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 577 | 285.79 | wind | 7 | 43200 | > th | dose independent | sin | 4 | NA |
| 626 | 286.38 | temperature | 30 | 1440 | > th | dose independent | sin | 19 | NA |
| 675 | 286.79 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 693 | 287.06 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 716 | 287.31 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 857 | 288.89 | wind | 5 | 43200 | > th | dose dependent | sin | 3 | NA |