BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0646100 Os03g0646100|AK100526
(452 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0646100 Similar to Plastid division protein ftsZ1 prec... 818 0.0
Os05g0443800 Similar to Plastid division protein ftsZ1 prec... 525 e-149
Os04g0665400 Similar to FtsZ1 309 3e-84
>Os03g0646100 Similar to Plastid division protein ftsZ1 precursor
Length = 452
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/452 (91%), Positives = 413/452 (91%)
Query: 1 MMAAPQLPCCTRLAPPCPGKAAAEARTLARSRFRCCAGAARPRSFQKKDSFLDLHPEVTL 60
MMAAPQLPCCTRLAPPCPGKAAAEARTLARSRFRCCAGAARPRSFQKKDSFLDLHPEVTL
Sbjct: 1 MMAAPQLPCCTRLAPPCPGKAAAEARTLARSRFRCCAGAARPRSFQKKDSFLDLHPEVTL 60
Query: 61 LRGGDEAAVVATRKGSPNGSPLEGLGAPPDHCDYDGAKIKXXXXXXXXSNAVNRMIESSM 120
LRGGDEAAVVATRKGSPNGSPLEGLGAPPDHCDYDGAKIK SNAVNRMIESSM
Sbjct: 61 LRGGDEAAVVATRKGSPNGSPLEGLGAPPDHCDYDGAKIKVVGVGGGGSNAVNRMIESSM 120
Query: 121 NGVEFWIVNTDVQAIRMSPVLPQNRLQIGQELTRGLGAGGNPDIGMNAAKESVESIQEAL 180
NGVEFWIVNTDVQAIRMSPVLPQNRLQIGQELTRGLGAGGNPDIGMNAAKESVESIQEAL
Sbjct: 121 NGVEFWIVNTDVQAIRMSPVLPQNRLQIGQELTRGLGAGGNPDIGMNAAKESVESIQEAL 180
Query: 181 YGADMXXXXXXXXXXXXXXXXXXXXXIAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAA 240
YGADM IAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAA
Sbjct: 181 YGADMVFVTAGMGGGTGTGGAPVIAGIAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAA 240
Query: 241 LRNSVDTLIVIPNDKLLSAVSPNTPVTEAFNLADDILRQGIRGISDIITVPGLVNVDFAD 300
LRNSVDTLIVIPNDKLLSAVSPNTPVTEAFNLADDILRQGIRGISDIITVPGLVNVDFAD
Sbjct: 241 LRNSVDTLIVIPNDKLLSAVSPNTPVTEAFNLADDILRQGIRGISDIITVPGLVNVDFAD 300
Query: 301 VRAIMQNAGSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGADMTLF 360
VRAIMQNAGSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGADMTLF
Sbjct: 301 VRAIMQNAGSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGADMTLF 360
Query: 361 EVNSAAEIIYDLVDPNANLIFGAVIDPSLNGQVSITLIATGFKRQDEPEGRXXXXXXXXX 420
EVNSAAEIIYDLVDPNANLIFGAVIDPSLNGQVSITLIATGFKRQDEPEGR
Sbjct: 361 EVNSAAEIIYDLVDPNANLIFGAVIDPSLNGQVSITLIATGFKRQDEPEGRTTKGGQQTQ 420
Query: 421 XDNGRRPSSAEGSMIEIPEFLRRRGPSRFPRV 452
DNGRRPSSAEGSMIEIPEFLRRRGPSRFPRV
Sbjct: 421 GDNGRRPSSAEGSMIEIPEFLRRRGPSRFPRV 452
>Os05g0443800 Similar to Plastid division protein ftsZ1 precursor
Length = 472
Score = 525 bits (1352), Expect = e-149, Method: Compositional matrix adjust.
Identities = 278/422 (65%), Positives = 314/422 (74%), Gaps = 1/422 (0%)
Query: 31 SRFRCCAGAARPRSFQKKDSFLDLHPEVTLLRGGDEAAVVATRKGSPNGSPLEGLGAPPD 90
S+ C A + R + KD+ DLHPE+++L G D AV A K E L
Sbjct: 50 SKLECSANSRRVGPRRTKDALYDLHPEISMLYGEDNGAVAAPGKEQDIVKTTERLEDVSA 109
Query: 91 HCDYDGAKIKXXXXXXXXSNAVNRMIESSMNGVEFWIVNTDVQAIRMSPVLPQNRLQIGQ 150
Y +IK SNAVNRMIES M GVEFWIVNTD QA+RMSP+ P N+LQIGQ
Sbjct: 110 SHRYSEPRIKVIGVGGGGSNAVNRMIESDMKGVEFWIVNTDFQAMRMSPIDPDNKLQIGQ 169
Query: 151 ELTRGLGAGGNPDIGMNAAKESVESIQEALYGADMXXXXXXXXXXXXXXXXXXXXXIAKS 210
ELTRGLGAGGNP+IGMNAAKES E +++A+ GADM IAKS
Sbjct: 170 ELTRGLGAGGNPEIGMNAAKESQELVEQAVSGADMIFVTAGMGGGTGTGGAPVIAGIAKS 229
Query: 211 MGILTVGIVTTPFSFEGRRRAVQAQEGIAALRNSVDTLIVIPNDKLLSAVSPNTPVTEAF 270
MGILTVGIVTTPF+FEGRRRA+QAQEGIA+LR++VDTLIVIPNDKLL+AVSPNTPVTEAF
Sbjct: 230 MGILTVGIVTTPFAFEGRRRALQAQEGIASLRSNVDTLIVIPNDKLLTAVSPNTPVTEAF 289
Query: 271 NLADDILRQGIRGISDIITVPGLVNVDFADVRAIMQNAGSSLMGIGTATGKSRARDAALN 330
NLADDILRQG+RGISDIITVPGLVNVDFADVR++M +AGSSLMGIGTATGK+RARDAALN
Sbjct: 290 NLADDILRQGVRGISDIITVPGLVNVDFADVRSVMSDAGSSLMGIGTATGKTRARDAALN 349
Query: 331 AIQSPLLDIGIERATGIVWNITGGADMTLFEVNSAAEIIYDLVDPNANLIFGAVIDPSLN 390
AIQSPLLDIGIERATGIVWNITGG D+TL EVN+AAE+IYDLVDP ANLIFG+VIDPS
Sbjct: 350 AIQSPLLDIGIERATGIVWNITGGNDLTLTEVNAAAEVIYDLVDPGANLIFGSVIDPSYT 409
Query: 391 GQVSITLIATGFKRQDEPEGRXX-XXXXXXXXDNGRRPSSAEGSMIEIPEFLRRRGPSRF 449
GQVSITLIATGFKRQ+E E R S EG ++IPEFL+R+G S F
Sbjct: 410 GQVSITLIATGFKRQEEAESRQAGGDNSRSHSSWFSSSSQEEGPTLQIPEFLQRKGRSGF 469
Query: 450 PR 451
R
Sbjct: 470 SR 471
>Os04g0665400 Similar to FtsZ1
Length = 404
Score = 309 bits (791), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/316 (51%), Positives = 221/316 (69%), Gaps = 7/316 (2%)
Query: 92 CDY---DGAKIKXXXXXXXXSNAVNRMIESSMNGVEFWIVNTDVQAIRMSPVLPQNRLQI 148
C + + A+IK +NAVNRMI S + G+EF+ +NTD QA+ S Q LQI
Sbjct: 40 CSFAPVETARIKVVGVGGGGNNAVNRMIGSGLQGIEFYAINTDSQALLNSQA--QYPLQI 97
Query: 149 GQELTRGLGAGGNPDIGMNAAKESVESIQEALYGADMXXXXXXXXXXXXXXXXXXXXXIA 208
G++LTRGLG GGNP++G AA+ES E+I AL +D+ I+
Sbjct: 98 GEQLTRGLGTGGNPNLGEQAAEESKEAIANALKDSDLVFITAGMGGGTGSGAAPVVAQIS 157
Query: 209 KSMGILTVGIVTTPFSFEGRRRAVQAQ--EGIAALRNSVDTLIVIPNDKLLSAVSPNTPV 266
K G LTVG+VT PFSFEGR+R++QA E + L SVDTLIVIPND+LL V NTP+
Sbjct: 158 KEAGYLTVGVVTYPFSFEGRKRSLQASALEALEKLERSVDTLIVIPNDRLLDVVDENTPL 217
Query: 267 TEAFNLADDILRQGIRGISDIITVPGLVNVDFADVRAIMQNAGSSLMGIGTATGKSRARD 326
+AF LADD+LRQG++GISDIIT+PGLVNVDFADV+A+M+N+G++++G+G ++ K+RA++
Sbjct: 218 QDAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKNSGTAMLGVGVSSSKNRAQE 277
Query: 327 AALNAIQSPLLDIGIERATGIVWNITGGADMTLFEVNSAAEIIYDLVDPNANLIFGAVID 386
AA A +PL+ IE ATG+V+NITGG D+TL EVN ++I+ L DP+AN+IFGAV+D
Sbjct: 278 AAEQATLAPLIGSSIEAATGVVYNITGGKDITLQEVNKVSQIVTSLADPSANIIFGAVVD 337
Query: 387 PSLNGQVSITLIATGF 402
G++ +T+IATGF
Sbjct: 338 DRYTGEIHVTIIATGF 353
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,216,057
Number of extensions: 561959
Number of successful extensions: 1504
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1497
Number of HSP's successfully gapped: 3
Length of query: 452
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 348
Effective length of database: 11,605,545
Effective search space: 4038729660
Effective search space used: 4038729660
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)