BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os03g0646100 Os03g0646100|AK100526
         (452 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36250.1  | chr2:15197661-15199932 REVERSE LENGTH=479          569   e-162
AT3G52750.1  | chr3:19549841-19552435 REVERSE LENGTH=474          556   e-158
AT5G55280.1  | chr5:22420740-22422527 REVERSE LENGTH=434          303   9e-83

>AT2G36250.1 | chr2:15197661-15199932 REVERSE LENGTH=479
          Length = 478

 Score =  569 bits (1467), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 293/442 (66%), Positives = 341/442 (77%), Gaps = 15/442 (3%)

Query: 26  RTLARSRFRCCAGAAR---------PRSFQKK--DSFLDLHPEVTLLRGGDEAAVVATRK 74
           RT+   + R    A +         PR +Q +  D FL+LHPE+++LRG   + +V  RK
Sbjct: 37  RTIDSKKNRVVVAAQKSESSPIRNSPRHYQSQAQDPFLNLHPEISMLRGEGTSTIVNPRK 96

Query: 75  GSPNGSPLEGLGAPPDHCDYDGAKIKXXXXXXXXSNAVNRMIESSMNGVEFWIVNTDVQA 134
            + +G  +E    P    +Y+ A+IK        SNAVNRMIES M+GVEFWIVNTD+QA
Sbjct: 97  ETSSGPVVEDFEEPSAPSNYNEARIKVIGVGGGGSNAVNRMIESEMSGVEFWIVNTDIQA 156

Query: 135 IRMSPVLPQNRLQIGQELTRGLGAGGNPDIGMNAAKESVESIQEALYGADMXXXXXXXXX 194
           +RMSPVLP NRLQIG+ELTRGLGAGGNP+IGMNAA+ES E I+EALYG+DM         
Sbjct: 157 MRMSPVLPDNRLQIGKELTRGLGAGGNPEIGMNAARESKEVIEEALYGSDMVFVTAGMGG 216

Query: 195 XXXXXXXXXXXXIAKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRNSVDTLIVIPND 254
                       IAK+MGILTVGI TTPFSFEGRRR VQAQEG+A+LR++VDTLIVIPND
Sbjct: 217 GTGTGAAPVIAGIAKAMGILTVGIATTPFSFEGRRRTVQAQEGLASLRDNVDTLIVIPND 276

Query: 255 KLLSAVSPNTPVTEAFNLADDILRQGIRGISDIITVPGLVNVDFADVRAIMQNAGSSLMG 314
           KLL+AVS +TPVTEAFNLADDILRQG+RGISDIIT+PGLVNVDFADVRAIM NAGSSLMG
Sbjct: 277 KLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMG 336

Query: 315 IGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGADMTLFEVNSAAEIIYDLVD 374
           IGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGG+D+TLFEVN+AAE+IYDLVD
Sbjct: 337 IGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVD 396

Query: 375 PNANLIFGAVIDPSLNGQVSITLIATGFKRQDEPEGRXXXXXXXXXXDNG--RRPSSA-- 430
           P ANLIFGAV+DP+L+GQVSITLIATGFKRQ+E EGR            G  RRPSS+  
Sbjct: 397 PTANLIFGAVVDPALSGQVSITLIATGFKRQEEGEGRTVQMVQADAASVGATRRPSSSFR 456

Query: 431 EGSMIEIPEFLRRRGPSRFPRV 452
           E   +EIPEFL+++G SR+PRV
Sbjct: 457 ESGSVEIPEFLKKKGSSRYPRV 478



>AT3G52750.1 | chr3:19549841-19552435 REVERSE LENGTH=474
          Length = 473

 Score =  556 bits (1432), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 289/425 (68%), Positives = 330/425 (77%), Gaps = 12/425 (2%)

Query: 31  SRFRCCAGAARPRSFQKKDSFLDLHPEVTLLRGGDEAAVVATRKGSPNGSPLEGLGAPPD 90
           S  R    +     FQ +DSFL+LHPE+++L    E + V      P    L+ L  P  
Sbjct: 58  SSIRNSLNSHSTSHFQSQDSFLNLHPEISMLNPRKETSSV------PITEDLDELSTP-- 109

Query: 91  HCDYDGAKIKXXXXXXXXSNAVNRMIESSMNGVEFWIVNTDVQAIRMSPVLPQNRLQIGQ 150
              Y+ A+IK        SNAVNRMIES M GVEFWIVNTD+QA+R+SPV P NRLQIG+
Sbjct: 110 -NTYNEARIKVIGVGGGGSNAVNRMIESEMIGVEFWIVNTDIQAMRISPVFPDNRLQIGK 168

Query: 151 ELTRGLGAGGNPDIGMNAAKESVESIQEALYGADMXXXXXXXXXXXXXXXXXXXXXIAKS 210
           ELTRGLGAGGNP+IGMNAA ES E+IQEALYG+DM                     +AK+
Sbjct: 169 ELTRGLGAGGNPEIGMNAATESKEAIQEALYGSDMVFVTAGMGGGTGTGGAPIIAGVAKA 228

Query: 211 MGILTVGIVTTPFSFEGRRRAVQAQEGIAALRNSVDTLIVIPNDKLLSAVSPNTPVTEAF 270
           MGILTVGIVTTPFSFEGRRRA+QAQEGIAALR++VDTLIVIPNDKLL+AVS +TPVTEAF
Sbjct: 229 MGILTVGIVTTPFSFEGRRRALQAQEGIAALRDNVDTLIVIPNDKLLAAVSQSTPVTEAF 288

Query: 271 NLADDILRQGIRGISDIITVPGLVNVDFADVRAIMQNAGSSLMGIGTATGKSRARDAALN 330
           NLADDILRQG+RGISDIIT+PGLVNVDFADVRAIM NAGSSLMGIGTATGK+RARDAALN
Sbjct: 289 NLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKTRARDAALN 348

Query: 331 AIQSPLLDIGIERATGIVWNITGGADMTLFEVNSAAEIIYDLVDPNANLIFGAVIDPSLN 390
           AIQSPLLDIGIERATGIVWNITGG+D+TLFEVN+AAE+IYDLVDP ANLIFGAV+DPS +
Sbjct: 349 AIQSPLLDIGIERATGIVWNITGGSDLTLFEVNAAAEVIYDLVDPTANLIFGAVVDPSYS 408

Query: 391 GQVSITLIATGFKRQDEPEGR-XXXXXXXXXXDNGRRPSSA--EGSMIEIPEFLRRRGPS 447
           GQ+SITLIATGFKRQ+E EGR              RRPSS+  EGS IEIPEFL+++G S
Sbjct: 409 GQISITLIATGFKRQEEGEGRPLQATQADASMGATRRPSSSFTEGSSIEIPEFLKKKGRS 468

Query: 448 RFPRV 452
           R+PR+
Sbjct: 469 RYPRL 473



>AT5G55280.1 | chr5:22420740-22422527 REVERSE LENGTH=434
          Length = 433

 Score =  303 bits (777), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 156/317 (49%), Positives = 219/317 (69%), Gaps = 5/317 (1%)

Query: 91  HCDY---DGAKIKXXXXXXXXSNAVNRMIESSMNGVEFWIVNTDVQAIRMSPVLPQNRLQ 147
            C +   + A+IK        +NAVNRMI S +  V+F+ +NTD QA+  S    +N LQ
Sbjct: 65  RCSFSPMESARIKVIGVGGGGNNAVNRMISSGLQSVDFYAINTDSQALLQSSA--ENPLQ 122

Query: 148 IGQELTRGLGAGGNPDIGMNAAKESVESIQEALYGADMXXXXXXXXXXXXXXXXXXXXXI 207
           IG+ LTRGLG GGNP +G  AA+ES ++I  AL G+D+                     I
Sbjct: 123 IGELLTRGLGTGGNPLLGEQAAEESKDAIANALKGSDLVFITAGMGGGTGSGAAPVVAQI 182

Query: 208 AKSMGILTVGIVTTPFSFEGRRRAVQAQEGIAALRNSVDTLIVIPNDKLLSAVSPNTPVT 267
           +K  G LTVG+VT PFSFEGR+R++QA E I  L+ +VDTLIVIPND+LL      TP+ 
Sbjct: 183 SKDAGYLTVGVVTYPFSFEGRKRSLQALEAIEKLQKNVDTLIVIPNDRLLDIADEQTPLQ 242

Query: 268 EAFNLADDILRQGIRGISDIITVPGLVNVDFADVRAIMQNAGSSLMGIGTATGKSRARDA 327
           +AF LADD+LRQG++GISDIIT+PGLVNVDFADV+A+M+++G++++G+G ++ K+RA +A
Sbjct: 243 DAFLLADDVLRQGVQGISDIITIPGLVNVDFADVKAVMKDSGTAMLGVGVSSSKNRAEEA 302

Query: 328 ALNAIQSPLLDIGIERATGIVWNITGGADMTLFEVNSAAEIIYDLVDPNANLIFGAVIDP 387
           A  A  +PL+   I+ ATG+V+NITGG D+TL EVN  ++++  L DP+AN+IFGAV+D 
Sbjct: 303 AEQATLAPLIGSSIQSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDD 362

Query: 388 SLNGQVSITLIATGFKR 404
              G++ +T+IATGF +
Sbjct: 363 RYTGEIHVTIIATGFSQ 379



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.318    0.135    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,511,295
Number of extensions: 320551
Number of successful extensions: 641
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 635
Number of HSP's successfully gapped: 3
Length of query: 452
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 350
Effective length of database: 8,310,137
Effective search space: 2908547950
Effective search space used: 2908547950
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)