FiT-DB / Search/ Help/ Sample detail

Os03g0639300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.5 (0.0253) R2 : 0.899
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.3 (0.0655) R2dC : 0.3 R2C : 0.385
β3 : -2.76 (0.0572) R2dE : 0.513 R2E : 0.6
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0976 (0.0532) R2dN8 : 0.000745 R2N8 : -0.00186
σ : 0.465
deviance : 98.63
__
_____
C
peak time of C : 7.59
E
wheather : radiation
threshold : 0.6079
memory length : 14
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 2.37
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
83.24 0.429 10.5 -0.578 2.4 -2.75 -1.87 -0.142 -0.157 7.55 0.6079 14 2.37 --
80.96 0.422 10.5 -0.559 2.3 -2.8 -1.72 -- -0.168 7.5 0.6079 14 2.37 --
88.54 0.442 10.5 -0.6 2.3 -2.81 -- 0.396 -0.166 7.5 0.6079 14 2.37 --
89.18 0.443 10.5 -0.599 2.3 -2.79 -- -- -0.165 7.52 0.6079 14 2.37 --
220.05 0.695 10.6 -0.561 -- -3.11 -- 0.694 -0.167 -- 3.293 6 6.26 --
221.74 0.698 10.5 -0.466 3.59 -- -1 -- -0.0887 10.5 -- -- -- --
225.87 0.704 10.5 -0.505 3.6 -- -- -- -0.0912 10.5 -- -- -- --
221.25 0.696 10.6 -0.528 -- -3.15 -- -- -0.175 -- 5.224 5 6.42 --
98.63 0.465 10.5 -- 2.3 -2.76 -- -- -0.0976 7.59 0.6079 14 2.37 --
1020 1.49 10.6 -0.57 -- -- -- -- -0.107 -- -- -- -- --
232.6 0.713 10.5 -- 3.6 -- -- -- -0.0349 10.6 -- -- -- --
228.41 0.706 10.6 -- -- -3.15 -- -- -0.116 -- 5.23 4 6.37 --
1028.57 1.5 10.6 -- -- -- -- -- -0.044 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 82.81 temperature 10.0 10 > th dose dependent rect. 23 6
4 84.66 radiation 1.0 10 < th dose dependent sin 8 NA
6 85.83 temperature 10.0 90 > th dose dependent rect. 23 5
17 93.14 radiation 1.0 10 < th dose independent sin 9 NA
22 95.96 humidity 50.0 10 > th dose dependent rect. 5 5
25 97.67 temperature 15.0 270 > th dose dependent rect. 23 2
26 97.87 radiation 1.0 10 > th dose independent sin 9 NA
31 98.31 wind 9.0 10 < th dose dependent rect. 22 7
40 100.24 wind 9.0 10 < th dose dependent rect. 5 4
43 100.66 precipitation 0.1 270 < th dose independent rect. 6 22
44 100.66 precipitation 0.1 270 < th dose dependent rect. 6 22
49 101.43 humidity 50.0 10 > th dose dependent rect. 22 7
52 102.19 precipitation 0.1 270 < th dose independent rect. 4 2
53 102.19 precipitation 0.1 270 < th dose dependent rect. 4 2
57 102.54 wind 9.0 270 < th dose independent rect. 4 2
58 102.54 temperature 10.0 270 > th dose independent rect. 4 2
60 102.54 temperature 30.0 270 < th dose independent rect. 4 2
61 102.54 humidity 50.0 270 > th dose independent rect. 4 2
64 102.54 atmosphere 995.0 270 > th dose independent rect. 4 2
65 102.54 atmosphere 1015.0 270 < th dose independent rect. 4 2
66 102.54 radiation 20.0 270 < th dose independent rect. 4 2
69 102.54 temperature 10.0 270 > th dose independent rect. 6 22
71 102.63 humidity 50.0 270 > th dose dependent rect. 4 2
74 102.88 radiation 40.0 30 < th dose dependent rect. 5 4
76 102.97 wind 9.0 10 < th dose independent rect. 22 7
77 102.97 temperature 10.0 10 > th dose independent rect. 22 7
78 102.97 temperature 30.0 10 < th dose independent rect. 22 7
79 102.97 humidity 50.0 10 > th dose independent rect. 22 7
82 102.97 atmosphere 995.0 10 > th dose independent rect. 22 7
83 102.97 radiation 1.0 10 < th dose independent rect. 22 7
88 102.97 temperature 10.0 10 > th dose independent rect. 5 17
90 102.97 atmosphere 1015.0 10 < th dose independent rect. 5 17
91 102.97 radiation 20.0 10 < th dose dependent rect. 22 7
102 103.38 radiation 40.0 10 < th dose independent rect. 5 4
103 103.46 wind 9.0 270 < th dose dependent rect. 4 2
107 103.66 radiation 40.0 270 < th dose dependent rect. 4 2
109 103.77 temperature 20.0 90 > th dose independent rect. 23 5
111 103.97 wind 7.0 10 < th dose independent rect. 5 4
113 103.97 temperature 10.0 10 > th dose independent rect. 5 4
115 103.97 temperature 30.0 10 < th dose independent rect. 5 4
116 103.97 humidity 50.0 10 > th dose independent rect. 5 4
118 103.97 atmosphere 995.0 10 > th dose independent rect. 5 4
119 103.97 atmosphere 1015.0 10 < th dose independent rect. 5 4
120 103.97 temperature 10.0 10 > th dose independent rect. 9 20
121 104.05 precipitation 0.1 10 < th dose independent rect. 5 4
122 104.05 precipitation 0.1 10 < th dose dependent rect. 5 4
128 104.20 precipitation 0.1 10 < th dose independent rect. 5 17
129 104.20 precipitation 0.1 10 < th dose dependent rect. 5 17
130 104.24 atmosphere 1015.0 10 < th dose independent rect. 22 7
140 105.10 precipitation 0.1 10 < th dose independent rect. 9 20
141 105.10 precipitation 0.1 10 < th dose dependent rect. 9 20
142 105.12 wind 9.0 10 < th dose independent rect. 5 17
147 105.59 wind 9.0 10 < th dose independent rect. 9 20
157 105.89 wind 9.0 270 < th dose independent rect. 6 22
158 105.92 temperature 10.0 270 > th dose dependent rect. 4 2
159 105.97 precipitation 0.1 90 < th dose independent rect. 4 5
160 105.97 precipitation 0.1 90 < th dose independent rect. 9 19
161 105.97 precipitation 0.1 90 < th dose dependent rect. 4 5
162 105.97 precipitation 0.1 90 < th dose dependent rect. 9 19
164 106.00 wind 9.0 90 < th dose independent rect. 4 5
165 106.00 temperature 10.0 90 > th dose independent rect. 4 5
167 106.00 humidity 50.0 90 > th dose independent rect. 4 5
168 106.00 atmosphere 995.0 90 > th dose independent rect. 4 5
169 106.00 atmosphere 1015.0 90 < th dose independent rect. 4 5
170 106.00 temperature 10.0 90 > th dose independent rect. 9 19
188 106.31 temperature 30.0 90 < th dose independent rect. 4 5
189 106.31 radiation 40.0 90 < th dose independent rect. 4 5
191 106.37 precipitation 0.1 10 < th dose independent rect. 22 7
192 106.37 precipitation 0.1 10 < th dose dependent rect. 22 7
194 106.47 precipitation 0.1 90 < th dose independent rect. 23 5
195 106.47 precipitation 0.1 90 < th dose dependent rect. 23 5
202 106.56 humidity 50.0 90 > th dose dependent rect. 23 5
204 106.61 wind 7.0 90 < th dose independent rect. 23 5
206 106.61 temperature 10.0 90 > th dose independent rect. 23 5
207 106.61 temperature 30.0 90 < th dose independent rect. 23 5
208 106.61 humidity 50.0 90 > th dose independent rect. 23 5
211 106.61 atmosphere 995.0 90 > th dose independent rect. 23 5
212 106.61 radiation 1.0 90 < th dose independent rect. 23 5
217 106.61 temperature 10.0 90 > th dose independent rect. 4 19
218 106.61 radiation 1.0 90 < th dose dependent rect. 23 5
224 106.64 wind 9.0 90 < th dose dependent rect. 23 5
282 107.19 wind 9.0 90 < th dose independent rect. 9 19
295 107.75 atmosphere 1015.0 90 < th dose independent rect. 23 5
316 108.18 wind 9.0 90 < th dose independent rect. 4 19
322 108.47 temperature 10.0 10 > th dose dependent rect. 9 20
348 108.68 atmosphere 1015.0 10 < th dose independent rect. 9 20
349 108.70 radiation 40.0 90 < th dose independent rect. 4 7
380 109.37 atmosphere 995.0 10 > th dose independent rect. 5 17
391 109.56 temperature 10.0 10 > th dose dependent rect. 5 3
451 110.60 atmosphere 995.0 10 > th dose independent rect. 9 20
459 110.73 temperature 10.0 90 > th dose dependent rect. 9 19
494 111.62 atmosphere 1015.0 90 < th dose independent rect. 9 19
587 114.04 precipitation 0.1 270 < th dose independent rect. 23 2
588 114.04 precipitation 0.1 270 < th dose dependent rect. 23 2
589 114.08 wind 7.0 270 < th dose independent rect. 23 2
592 114.17 wind 9.0 270 < th dose dependent rect. 23 2
597 114.43 precipitation 0.1 270 < th dose independent rect. 7 20
598 114.43 precipitation 0.1 270 < th dose dependent rect. 7 20
606 114.61 temperature 10.0 270 > th dose independent rect. 23 2
607 114.61 temperature 30.0 270 < th dose independent rect. 23 2
608 114.61 humidity 50.0 270 > th dose independent rect. 23 2
611 114.61 atmosphere 995.0 270 > th dose independent rect. 23 2
612 114.61 radiation 1.0 270 < th dose independent rect. 23 2
617 114.61 temperature 10.0 270 > th dose independent rect. 1 22
618 114.61 radiation 1.0 270 < th dose dependent rect. 23 2
624 114.71 temperature 20.0 270 > th dose independent rect. 23 2
626 114.76 atmosphere 995.0 90 > th dose independent rect. 4 19
682 115.59 wind 9.0 90 < th dose dependent rect. 4 7
686 115.68 atmosphere 1015.0 270 < th dose independent rect. 23 2
693 115.87 temperature 10.0 1440 > th dose independent rect. 5 5
696 115.87 atmosphere 995.0 1440 > th dose independent rect. 5 5
697 115.87 atmosphere 1015.0 1440 < th dose independent rect. 5 5
698 115.87 temperature 10.0 1440 > th dose independent rect. 10 19
758 117.02 atmosphere 1015.0 10 < th dose dependent rect. 22 7
760 117.03 radiation 1.0 10 > th dose independent rect. 5 4
809 117.68 atmosphere 1015.0 10 < th dose dependent rect. 5 4
850 118.23 humidity 50.0 270 > th dose dependent rect. 23 2
921 118.99 radiation 40.0 10 < th dose dependent rect. 5 19
948 119.47 temperature 30.0 90 < th dose independent rect. 4 7
950 119.50 wind 9.0 270 < th dose independent rect. 1 22
986 119.88 precipitation 0.1 90 < th dose independent rect. 11 17
988 119.88 precipitation 0.1 90 < th dose dependent rect. 11 17
994 120.03 humidity 50.0 10 > th dose independent rect. 5 17