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Os03g0633400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0144) R2 : 0.544
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.843 (0.0376) R2dC : 0.504 R2C : 0.48
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.212 (0.0302) R2dN8 : 0.0638 R2N8 : 0.0396
σ : 0.271
deviance : 33.5
__
_____
C
peak time of C : 5.82
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.37 0.246 11.9 0.0293 0.85 -0.00951 0.0582 -1.4 -0.126 5.79 19.2 7373 -- --
27.61 0.245 11.9 -0.0691 0.848 0.583 0.0823 -- -0.182 5.76 16.63 7184 -- --
27.31 0.243 11.9 0.016 0.847 -0.027 -- -1.47 -0.13 5.77 18.8 7340 -- --
27.55 0.244 11.9 -0.0265 0.855 0.63 -- -- -0.169 5.78 16.7 7208 -- --
64.64 0.374 11.9 0.0584 -- -0.00375 -- -1.39 -0.109 -- 18.9 6275 -- --
31.07 0.261 11.9 -0.303 0.848 -- 0.0824 -- -0.246 5.81 -- -- -- --
31.09 0.261 11.9 -0.303 0.848 -- -- -- -0.246 5.8 -- -- -- --
65.13 0.376 11.9 0.00854 -- 0.596 -- -- -0.144 -- 16.77 9022 -- --
27.57 0.245 11.9 -- 0.857 0.647 -- -- -0.164 5.78 16.7 7193 -- --
68.38 0.386 12 -0.276 -- -- -- -- -0.226 -- -- -- -- --
33.5 0.271 11.9 -- 0.843 -- -- -- -0.212 5.82 -- -- -- --
65.12 0.376 11.9 -- -- 0.591 -- -- -0.147 -- 16.7 9005 -- --
70.39 0.392 12 -- -- -- -- -- -0.195 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.57 humidity 50 43200 < th dose dependent rect. 20 13
2 26.62 humidity 50 43200 < th dose dependent rect. 7 2
3 26.63 humidity 50 43200 < th dose independent rect. 19 14
7 26.66 humidity 50 43200 < th dose independent rect. 21 12
10 26.69 humidity 50 43200 < th dose independent rect. 4 5
11 26.69 humidity 50 43200 > th dose independent rect. 2 7
24 26.73 humidity 50 43200 > th dose independent rect. 7 1
25 26.73 humidity 50 43200 > th dose independent rect. 21 12
33 26.74 humidity 50 43200 > th dose independent rect. 19 14
35 26.75 radiation 20 4320 < th dose independent rect. 6 1
38 26.77 humidity 50 43200 < th dose independent rect. 7 1
40 26.77 humidity 50 43200 > th dose independent rect. 23 10
57 26.84 radiation 20 4320 < th dose independent rect. 24 7
58 26.84 radiation 20 4320 < th dose independent rect. 22 9
59 26.84 radiation 20 4320 < th dose independent rect. 20 11
70 26.87 humidity 70 43200 < th dose independent rect. 24 1
72 26.87 radiation 20 4320 < th dose independent rect. 17 14
76 26.90 radiation 20 14400 > th dose dependent rect. 6 1
98 26.94 humidity 70 43200 < th dose dependent rect. 23 2
100 26.95 humidity 70 43200 < th dose dependent rect. 22 4
105 26.97 humidity 90 14400 < th dose independent rect. 23 10
115 27.00 humidity 70 43200 > th dose independent rect. 23 2
121 27.00 humidity 60 43200 > th dose independent rect. 21 9
155 27.05 temperature 15 4320 > th dose independent rect. 2 7
224 27.11 temperature 15 4320 > th dose independent rect. 2 4
254 27.13 wind 5 14400 > th dose independent rect. 22 2
264 27.14 wind 5 14400 < th dose independent rect. 23 1
334 27.19 wind 5 14400 < th dose independent rect. 21 5
341 27.19 radiation 10 4320 > th dose dependent rect. 17 1
353 27.20 radiation 10 14400 > th dose independent rect. 5 1
370 27.20 humidity 60 43200 > th dose dependent rect. 21 1
389 27.21 humidity 90 14400 > th dose independent rect. 24 11
391 27.21 humidity 90 14400 > th dose independent rect. 24 15
398 27.22 humidity 90 14400 > th dose independent rect. 24 9
409 27.23 humidity 90 14400 < th dose independent sin 7 NA
415 27.23 humidity 90 43200 < th dose dependent rect. 21 1
420 27.24 wind 5 14400 > th dose independent rect. 21 5
421 27.24 temperature 10 43200 > th dose independent rect. 10 5
427 27.24 temperature 15 4320 < th dose dependent rect. 24 2
429 27.24 temperature 15 4320 < th dose dependent rect. 23 4
448 27.25 humidity 60 43200 > th dose dependent rect. 20 3
462 27.27 humidity 90 14400 < th dose independent rect. 23 2
476 27.28 wind 1 43200 < th dose dependent rect. 2 1
479 27.29 radiation 40 14400 < th dose independent rect. 15 1
531 27.31 radiation 40 14400 < th dose independent rect. 15 10
545 27.32 temperature 15 4320 < th dose independent rect. 2 3
548 27.32 temperature 15 4320 < th dose independent rect. 1 6
582 27.33 wind 5 14400 > th dose dependent rect. 22 2
593 27.34 humidity 90 14400 < th dose independent rect. 22 5
642 27.36 humidity 90 14400 > th dose independent rect. 5 2
668 27.36 humidity 50 43200 > th dose dependent rect. 19 5
681 27.37 temperature 20 4320 > th dose independent rect. 18 1
682 27.37 humidity 50 43200 > th dose independent rect. 19 3
708 27.38 humidity 90 14400 > th dose independent sin 6 NA
710 27.38 temperature 20 4320 < th dose independent rect. 18 1
719 27.38 temperature 20 4320 > th dose independent rect. 17 7
739 27.39 temperature 20 4320 < th dose independent rect. 17 7
756 27.40 wind 1 43200 > th dose independent rect. 2 1
757 27.40 humidity 50 43200 > th dose independent rect. 21 1
766 27.40 radiation 40 14400 < th dose independent rect. 15 6
770 27.40 radiation 40 14400 < th dose independent rect. 15 8
786 27.41 wind 1 43200 < th dose independent rect. 2 1
812 27.41 humidity 90 14400 > th dose dependent rect. 5 2
823 27.41 wind 3 43200 < th dose dependent rect. 5 17
825 27.42 radiation 20 4320 < th dose independent rect. 17 1
848 27.42 wind 3 43200 < th dose dependent rect. 9 1
849 27.42 wind 7 14400 > th dose dependent rect. 18 2
877 27.43 radiation 40 14400 < th dose independent rect. 15 15
881 27.43 humidity 80 43200 < th dose dependent rect. 7 1
890 27.44 temperature 15 4320 < th dose independent sin 7 NA
909 27.44 radiation 20 4320 < th dose independent rect. 17 8
932 27.44 temperature 15 4320 < th dose dependent rect. 20 16
970 27.45 wind 3 43200 < th dose dependent rect. 5 11
974 27.45 temperature 15 4320 < th dose dependent rect. 21 14
989 27.46 temperature 15 4320 > th dose independent sin 7 NA
993 27.46 wind 5 43200 > th dose independent rect. 8 2